Osmerus eperlanus (European smelt): 134028786
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Entry
134028786 CDS
T10927
Symbol
hif1al
Name
(RefSeq) LOW QUALITY PROTEIN: hypoxia inducible factor 1 subunit alpha, like
KO
K08268
hypoxia-inducible factor 1 alpha
Organism
oep Osmerus eperlanus (European smelt)
Pathway
oep04137
Mitophagy - animal
oep04140
Autophagy - animal
oep04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
oep00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
134028786 (hif1al)
04137 Mitophagy - animal
134028786 (hif1al)
04148 Efferocytosis
134028786 (hif1al)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oep03000
]
134028786 (hif1al)
Transcription factors [BR:
oep03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
134028786 (hif1al)
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Paralog
GFIT
Motif
Pfam:
PAS_3
PAS_11
PAS
HIF-1
PAS_9
PAS_4
Motif
Other DBs
NCBI-GeneID:
134028786
NCBI-ProteinID:
XP_062328582
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Position
11:complement(17102955..17109060)
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AA seq
574 aa
AA seq
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MRVTLSFLRMYRLLHSGEEEEVAEPDAEGEELTDSFYPRALAGFVMVMTEEGDMIYLSDS
VSKHIGITQLEMIGQSVYDYIHPCDQEELRDLLTLRPGVSKKRQQSERNFFLRIKSTMTN
RGRTVNIKSATWKVLHCTGHVLQEDSSPPAGGVLTLLCEPIPHPSSVEFPLDSSTFLTRH
NMNLRFTHCEGRVTELVGYQPDDLIGRSAYEFYHALDSDHVTKSLHILLSKGQVXTAQYR
FLVKSGGFVWAETQATVLYNSKTSQPEAVVCLNFILSVVEQPDVVFSVEQTRCGPQPSAE
SEEAQEEEQGSGCTASSKHPPGAGTSGSDTQELLPLAPLSADTDSPLSDFVELSFASSPS
PDTVPDAPQDLCTPSLRLLLTPIFEPLSSSPASPSSPAPALASSEEMSACDEVQTVPAVT
PEDGVTEGVEMMDLEMLAPYISMDDDFQLTFLSPVLPDTDPSDPPSHLLSTRKRTHQLDK
DTPSQLLIGYKRQRQVPLSLEQEMLLLDCLDEADNPELDLELLPLGRSQLLTDRDPVLGG
PQGLCDTAGLMRDIFLSRPPDAMGPDLPLVSSLT
NT seq
1725 nt
NT seq
+upstream
nt +downstream
nt
atgagggtgaccctcagcttcctgcgcatgtaccgcctcctccactcaggggaggaggag
gaggtggcggagcctgatgcggagggagaggagcttacggacagcttctaccctcgggcg
ctggcgggtttcgtcatggtgatgacggaagagggagacatgatctacctctcggacagc
gtcagcaaacacatcggcataacccagttggagatgattggccagagcgtgtatgactac
atacacccttgtgatcaggaggaactacgagatctgctcacactcagaccaggtgtgtct
aagaagaggcagcaatctgagaggaacttcttcttaaggatcaagagcaccatgaccaac
agggggcgcactgtcaacatcaagtctgccacttggaaggtgctgcactgtacaggtcac
gtgctgcaggaggactcatcgccccctgctggtggcgtgctgacactgctgtgtgagccc
atccctcacccctccagcgtggagttccccctggacagcagcaccttcctcacccggcac
aacatgaatctgcgcttcacacactgcgagggcagggtgacggagttggtgggatatcag
cctgatgatctgattggacggtccgcctatgaattctatcatgccctggactctgaccat
gtgaccaagagcttgcacatcctcctgtctaagggtcaggtgnacactgctcagtaccgc
ttcctggttaagagcggggggtttgtgtgggcggagactcaggcgactgtcctgtacaac
agcaagacgtcccaacctgaagctgtggtctgcctcaacttcatcctcagtgtggtggag
cagcctgacgtggtgttctcagtggagcagactcgctgtggtccccagcccagcgctgag
agtgaggaggcccaggaggaggagcagggctcgggctgcacagccagcagcaagcaccct
cctggagctggaacctcaggcagcgacacccaggagctgctgccgctggcaccgctctct
gcagacaccgactcacctctctcagactttgtggagctgtccttcgccagttctcccagc
cccgacaccgtcccagatgcccctcaggacctctgcacccctagcctgcgcctgctcctc
acccccatcttcgagcccctctcctcctcaccagcatcaccctcctcacctgctcccgcc
ctggcctccagtgaggagatgtcagcctgtgacgaggtgcagacggttcctgccgtcact
ccagaggacggcgtgactgagggtgtggagatgatggacttggagatgttggctccctac
atctccatggatgatgacttccagctcaccttcctctccccagtgctccccgacactgac
ccctccgaccccccctcacacctgctcagcacacgcaaacggacccaccagctggacaaa
gacacgccctcccaactcctgattggctacaagagacagagacaggtccccttgtctctg
gagcaggaaatgctactactggactgcttggacgaggctgataacccagagttggacctg
gagctcctcccactggggcggagccagttactgacagacagagaccctgtgttagggggg
ccacagggactctgtgacacagcaggcttgatgagggacatctttttgtcccgccccccc
gacgccatgggcccagacctgccactcgtgtcctccttgacttga
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