Osmerus eperlanus (European smelt): 134028859
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Entry
134028859 CDS
T10927
Symbol
ddx6
Name
(RefSeq) probable ATP-dependent RNA helicase ddx6
KO
K12614
ATP-dependent RNA helicase DDX6/DHH1 [EC:
5.6.2.7
]
Organism
oep Osmerus eperlanus (European smelt)
Pathway
oep03018
RNA degradation
Brite
Enzymes [BR:
oep01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
134028859 (ddx6)
Messenger RNA biogenesis [BR:
oep03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
134028859 (ddx6)
mRNA degradation factors
5'-3' decay
Decapping complex
134028859 (ddx6)
Chromosome and associated proteins [BR:
oep03036
]
Eukaryotic type
Gene silencing
piRNA pathway
134028859 (ddx6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
134028859
NCBI-ProteinID:
XP_062328717
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All DBs
Position
11:11726309..11734461
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AA seq
483 aa
AA seq
DB search
MSATRTENPMILGLSNQNGQLRGSLKSAGGPGGGGGSPQMQQSQTKIGSTINNGSSQSAP
TANTVIKAGDDWKKNLKLPPKDMRMRTSDVTATKGNEFEDYCLKRELLMGIFEMGWEKPS
PIQEESIPIALSGRDILARAKNGTGKSGAYLIPLLERIDLKRDCIQALGIVPTRELALQV
SQICIQVSKHMGGVKVMATTGGTNLRDDIMRLDETVHVVIATPGRILDLIKKGVAKVDKV
QMIVLDEADKLLSQDFVVMMEEILGYMAKQRQILLYSATFPLSVQKFMNSHLQKPYEINL
MEELTLKGVTQYYAYVTERQKVHCLNTLFSRLQINQSIIFCNSSQRVELLAKKISQLGYS
CFYIHAKMRQEHRNRVFHDFRNGLCRNLVCTDLFTRGIDIQAVNVVINFDFPKLGETYLH
RIGRSGRFGHLGLAINLITYDDRFNLKGIEEQLGTEIKPIPGSIDKSLYVAEYHSESGED
GKL
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atgagtgccacaagaacagagaacccaatgatcttgggtttgtcaaaccagaatggccaa
cttcgaggctcgctgaagtctgcaggaggaccaggtggaggaggaggaagtcctcaaatg
caacaaagtcagacgaagatcggaagcacaatcaacaatggcagttcccaatctgccccc
acagccaacactgtcataaaggctggagatgactggaagaaaaatttgaaactcccccca
aaggatatgaggatgaggacatcagatgtaaccgcaactaaaggcaatgaatttgaagat
tactgcctcaagagagagctactaatgggaatctttgagatgggctgggagaaaccttct
cctatccaggaggagagcattcccattgcgctgtcaggaagagacatcttggctagagca
aagaacggcacaggaaagagcggagcctacctcatccccttacttgaacgcattgacctg
aagagggactgcatacaagctttgggcatcgtgcccaccagagaactggccctgcaggtc
agccagatatgcatccaagtcagcaaacacatgggtggggtcaaggtcatggcaaccaca
ggtgggaccaacctgcgtgatgacatcatgaggcttgatgagacagtgcatgtggtgatt
gctacacctgggcgaatcttggatctgatcaagaaaggggtagccaaagttgataaagtg
cagatgatcgttctggatgaagccgataagctcctgtctcaggactttgtggtaatgatg
gaagagatcctgggctacatggcaaaacaaagacagatcctgctctactctgccaccttt
ccactcagtgtgcagaagttcatgaactctcatctgcaaaagccctatgagatcaaccta
atggaggagctgacccttaaaggagtgacacaatattatgcctatgttactgaaaggcag
aaggtccattgccttaacacactgttctcaaggctccagatcaatcagtccataatcttc
tgcaactcgtctcagagagtggagcttctggccaagaagatctcccagcttggctactcg
tgtttctacatccacgccaagatgagacaggagcaccgcaaccgtgtgttccacgacttt
agaaatggcctgtgccgaaacctcgtctgcactgatctctttaccagaggcattgacatt
caagctgtgaatgttgtcatcaactttgacttccccaagctgggagagacgtatcttcac
cgcatcggcagatccggccgttttggacacctgggtttggccatcaacctgatcacctac
gacgaccgcttcaacctgaagggcatcgaagagcagctggggactgagataaagcccatc
cccggaagcatcgacaagagcctgtacgtggcagagtaccacagcgagagcggggaggac
ggcaagctgtga
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