KEGG   Osmerus eperlanus (European smelt): 134028915
Entry
134028915         CDS       T10927                                 
Symbol
pafah1b1a
Name
(RefSeq) lissencephaly-1 homolog A
  KO
K16794  platelet-activating factor acetylhydrolase IB subunit alpha
Organism
oep  Osmerus eperlanus (European smelt)
Pathway
oep00565  Ether lipid metabolism
oep01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:oep00001]
 09100 Metabolism
  09103 Lipid metabolism
   00565 Ether lipid metabolism
    134028915 (pafah1b1a)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:oep03036]
    134028915 (pafah1b1a)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:oep04147]
    134028915 (pafah1b1a)
Chromosome and associated proteins [BR:oep03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    134028915 (pafah1b1a)
Exosome [BR:oep04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   134028915 (pafah1b1a)
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz EIF3I Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd WDR55 WD40_MABP1-WDR62_2nd Beta-prop_EML_2 Beta-prop_WDR75_1st Beta-prop_TEP1_C Beta-prop_EIPR1 Beta-prop_WDR90_POC16_2nd ANAPC4_WD40 WD40_MABP1-WDR62_1st Beta-prop_IFT122_1st NBCH_WD40 Beta-prop_SCAP Beta-prop_Vps41 Beta-prop_Nup120_160 Beta-prop_DCAF4 Beta-prop_EML WDR90_beta-prop_4th LisH Beta-prop_SPT8 WD40_RFWD3 LisH_PAC1 Beta-prop_DCAF12 Beta-prop_IFT140_1st Beta-prop_RIG_2nd eIF2A Beta-prop_WDR35_TULP_N Nucleoporin_N Beta-prop_NUP159_NUP214 Pox_A_type_inc Beta-prop_WDR11_2nd LisH_2 ARMC9_LisH DUF2570 LisH_WDR26 SutA-RBD
Other DBs
NCBI-GeneID: 134028915
NCBI-ProteinID: XP_062328806
LinkDB
Position
11:complement(9132013..9161680)
AA seq 410 aa
MVLSQRQRDELNRAIADYLRSNGYEEAYSVFKKEAEIDMNEELDKKYAGLLEKKWTSVIR
LQKKVMELESKLNEAKEEITLGGPVTQKRDPKEWIPRPPEKYALSGHRSPVTRVIFHPVF
SVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDQTGKLLASCSADMTIKLWDFQ
GFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVATGYCVKTFTGHREWVRMV
RPNQDGTLIASCSNDQTVRVWVVASKECKAELREHEHVVECISWAPESAHPTILEATGSE
TKKSGKPGPFLLSGSRDKTIKMWDVSIGMCLMTLVGHDNWVRGMLVHPGGKFIVSCADDK
TLRIWDYKNKRCMKTLSAHEHFVTSLDFHKAAPYVVTGSVDQTVKVWECR
NT seq 1233 nt   +upstreamnt  +downstreamnt
atggtgctgtcacaacggcaacgagacgaactaaatcgagcgatagctgattacctgcgt
tccaacggatatgaagaggcctattcagttttcaagaaggaggcggaaatagacatgaat
gaagaattggataagaagtatgccggccttttggaaaagaaatggacctcagtcatcaga
ttacaaaagaaggtcatggagctggagtcgaagctgaacgaggcgaaggaggagatcacc
ctgggtgggcccgtcactcagaagcgggaccccaaagagtggatcccacgcccgcccgag
aagtatgcgctgagcggccaccgcagcccggtcacccgtgtcatcttccaccccgtgttc
agcgtcatggtctcggcctccgaggacgccaccatcaaggtctgggactacgagacggga
gactttgagcgcacgctgaagggccacacagactcggtgcaggacatctcctttgaccag
actggcaagctgctggcctcctgctccgcagacatgaccatcaagctgtgggacttccaa
ggctttgagtgcatcagaaccatgcatggacatgaccataatgtttcatctgtagccatc
atgcccaacggagatcacatagtgtcagcatcgagggacaaaaccatcaaaatgtgggag
gtggccactggctactgtgtgaagaccttcacgggccacagggagtgggtgcgcatggtg
cggcccaaccaggacggcaccctgatcgccagctgctccaacgaccagacggtgcgcgtg
tgggtggtggcctccaaggagtgcaaggcggagctgcgggagcacgagcacgtggtggag
tgcatctcctgggccccggagagcgcccaccccaccatcctggaggccacagggtcagag
actaagaagagtggcaagcctggcccctttctgctatctggctctagagacaagaccatc
aagatgtgggacgtcagcatcggcatgtgccttatgacactggttggtcatgacaactgg
gtgcgtgggatgctggtccaccccggaggcaagttcatcgtgagctgtgctgacgacaaa
accttaaggatctgggactacaagaacaagcgctgcatgaagactctgagtgcccacgaa
cactttgttacctctctggatttccacaaggctgctccgtatgttgtaaccggaagtgta
gatcaaacagtaaaagtttgggagtgccgctga

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