Osmerus eperlanus (European smelt): 134028979
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Entry
134028979 CDS
T10927
Symbol
rbl1
Name
(RefSeq) retinoblastoma-like protein 1
KO
K04681
retinoblastoma-like protein 1
Organism
oep Osmerus eperlanus (European smelt)
Pathway
oep04110
Cell cycle
oep04218
Cellular senescence
oep04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
oep00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
134028979 (rbl1)
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
134028979 (rbl1)
04218 Cellular senescence
134028979 (rbl1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oep03000
]
134028979 (rbl1)
Transcription factors [BR:
oep03000
]
Eukaryotic type
Other transcription factors
Pocket domain Rb
134028979 (rbl1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RB_A
RB_B
DUF3452
TFIIB
SLH
Motif
Other DBs
NCBI-GeneID:
134028979
NCBI-ProteinID:
XP_062328907
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Position
1:25121583..25174621
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AA seq
1099 aa
AA seq
DB search
MRGDESDSDSGRMDESSVRTSLDALCQELNMDEETATEAMQNFAAIWNTYTLEGEVVHWL
ACALYAACRKNCTPTVGQGLMEGNCVSLTRILRTAKLSLLQFFSKMQKWLEMTSLPQDFR
LRVGRLERNFEVSTVIFRKFEPIFMDMFQNPQGEPTRQPRSRKHRRQPCHVSDVFRFCWT
LFVYTKGNFRMIGDDLVNSYHLLLCCLDLVFNNALLCSNSKDLINPLFRGLPGVCSESQA
PGLQGGVMEAGPGMEPPSVMEAGPGMEPPSVMEAGPGMEPPSVMERLCELHDGLVMEAKG
IREHYFKPYITRLYQRGILQGNEEQLTQLLDPPNFTDNNKSVNREYEEYVLTVGDFDERV
FLGTDADEEIGTPRKTGPAPSPAHGQLSARKQVESNLQQHFDKTGSLAPSTPLTGRRYLK
EKEQLVTPVSSATQSVSRLQSMVAGLRPAPSPALINICRSCSRDPLENVQTRIKTLGDAF
KQHYTHDTHLLPGSHMDFAEKRLRLGEILYYKVLENVMLQETRRLHGKDMAVLLEQDMFH
CSLLACCLEVVLFSYSSPRTFPWIISIFKLPAFYFFKVIEVFIRAEEGLSRDMVKHLNSV
EEQVLESRAWTASSALWGALQADGNKVPTVEEVNFPGSFDTGCGSSGPAHLPLVALSPIV
HPRIREFRSALGSARKDVPPSPLSVHDRYSSPAAGSAKRRLFGDEPPPRPPGHLAPPAHS
PLAPPAHSPLASPAKRLSFSPGAMLKIDSPTLLMSSPNSQTLTFPLQGLKTNGGGITLIQ
SGPITAQILLTASPSHPSPAPQPSATRPRRTGSLALFFRKVYHLASVRLRDLCVKLDISP
ELRGKIWTCFEHSLVHCSSLMRDRHLDQILLSAVYIISKITKEPHTFQDIMKCYRSQPQA
SSQVYRSVLLCHKEKPDEHMEVEPTTGVTEKANQENREECPSQSEEERGDLIQFYNTIYV
LKMKSFALRYATLGNDSRMEAPPPLSPFPSVRAQPLSPRRVSQKHTLYVSPHKPPHCPPP
SSAYTYRINGSPSKELSDINRMIRQGGGAQGGVAPPSRKRAFSMEGDYADASPSKRACDS
SEDVLLRRLQDVVSERKHH
NT seq
3300 nt
NT seq
+upstream
nt +downstream
nt
atgcggggggacgagtccgactcggattcggggagaatggacgaaagttccgtccgaacc
agtttggacgcgctctgccaggaacttaatatggacgaggagaccgcgactgaagccatg
caaaacttcgcagccatatggaatacatacaccctggagggagaggtggtccactggctg
gcgtgtgcgctgtacgcagcctgcaggaagaactgcactcccactgtgggtcagggcttg
atggaggggaactgtgtgtctctcacccgcatcctccggactgccaaactcagtctgctg
cagttcttcagtaagatgcagaaatggctggagatgaccagcctgcctcaggacttcagg
ctgcgcgtaggcaggctggagcgcaacttcgaggtttccacggtgatcttcaggaagttt
gagcccatcttcatggacatgttccagaacccccagggagagcccacacgccagccccgc
agcaggaaacacagacggcagccgtgtcatgtgagtgacgtgtttcgcttctgctggact
ctgttcgtctacacgaaagggaacttcaggatgataggtgatgacctggtgaactcatat
catctgctgctctgctgtctggacctggtgttcaacaacgctctgctctgctccaacagc
aaagacctcatcaaccctctcttcagagggctgccgggcgtgtgcagcgagagccaggcc
ccaggcctgcaggggggtgtgatggaggctggtcctgggatggagcctcccagcgtgatg
gaggctggtcctgggatggagcctcccagcgtgatggaggctggtcctgggatggagcct
cccagcgtgatggagcggctgtgtgagttacatgacgggctcgtgatggaagccaagggg
atccgggaacattacttcaaaccctacatcacacggctgtaccagagagggatcctgcag
gggaatgaggaacagctgacacagctgctggatccacccaacttcacagacaacaataag
tcggtgaatagggagtatgaggagtacgtattgactgtgggggactttgacgagcgagtg
tttctgggcaccgacgccgatgaagaaatcggaacccctcgcaagaccggccccgccccc
agccccgcccacggacagctgtctgctcgcaagcaggtggagagcaacctgcagcagcac
tttgacaagaccggctctctggcgccctctacccccctgacggggcggcgctacctgaaa
gagaaggagcagctggtgacgcccgtgtcctcagccacgcagagtgtcagcaggctgcag
agcatggtggccggcctgcggcccgcgcccagccccgccctcatcaacatatgcaggtcc
tgctccagagaccctctagagaacgtccagaccagaataaagacgctcggagacgccttc
aaacagcactacacacacgacacacacctgctgcctggatcacacatggactttgcggag
aagcgtctgcgcctgggggagatcctgtactacaaggtcctggagaacgtcatgctgcag
gagacgcgcaggctccacggcaaggacatggctgttctgctggagcaggacatgttccac
tgctctctgctggcctgctgcctggaggtagtgctgttctcctacagctcccccagaacc
ttcccctggatcatcagcatcttcaagctgcctgctttctacttcttcaaggtgattgag
gtgttcatcagggcggaggagggtctgtccagggacatggtgaagcatctgaactctgtg
gaggagcaggtgctggagagcagagcctggaccgcctcctccgccctctggggggcgctg
caggccgacggcaacaaggtccctaccgtggaggaggtaaacttcccgggcagctttgac
acgggctgcggcagttctggccccgcccacctgcccctggtcgccctgtcccccatcgtc
cacccgcgcatacgagagttccgctccgccctgggcagcgcccgcaaagacgtccccccc
tcccctctctccgtccatgaccgctacagctcgcctgcggccggcagcgccaagagacgg
ctgtttggggacgagcccccccccaggcccccggggcacctggccccccctgcccacagc
cccctggccccccctgcccacagccccctggcctcccctgctaagaggctgagcttcagc
cccggggccatgctgaagatagacagccccaccctgctcatgtcctctcccaacagccag
acgctcaccttccccctgcaaggtttaaagaccaacggaggtggaatcacactgatccag
tctggcccaatcacggctcagatcctgctgaccgcctcccccagccacccaagccccgcc
ccccagccaagcgctacgcgtccaagacgcaccgggtccctagcgctgttcttcaggaag
gtgtaccacctggccagtgtgcgtctgagagacctgtgtgtgaagctggacatctccccg
gagctgagggggaagatctggacctgcttcgagcactccctggtccactgctcctccctc
atgagggaccgacacctggaccagatcctgctctccgccgtctacatcatctccaagatc
accaaagagcctcacaccttccaggatatcatgaagtgctaccgtagccaaccacaggcc
agcagtcaggtgtatcgtagtgtactgctttgtcacaaagagaaacctgacgagcacatg
gaagtggaacccacgacaggagtcacagagaaagccaatcaggagaaccgagaggagtgt
cccagccaatcagaggaggagcgtggtgacctcatccagttctataacaccatctacgtt
ctgaagatgaagagcttcgccctgcgctatgccacacttggcaacgactccaggatggag
gcccctccccctctgtctccgttcccgtccgtgcgagcccagcccctctccccccgccgg
gtctcccagaagcacaccctctacgtctccccccacaagcctccccactgcccccccccc
tcctccgcctacacctaccgcatcaacggcagtccctccaaggagctgagtgacattaac
aggatgatccgtcaggggggcggggcccaggggggtgtggccccgcccagcaggaagagg
gcgttctctatggaaggcgactacgcggacgcgtccccctccaagcgagcgtgtgacagc
agcgaggacgtgttgctacgacgactgcaggacgtggtgtctgagaggaagcaccactga
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