Osmerus eperlanus (European smelt): 134029150
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Entry
134029150 CDS
T10927
Symbol
smc4
Name
(RefSeq) structural maintenance of chromosomes protein 4 isoform X1
KO
K06675
structural maintenance of chromosome 4
Organism
oep Osmerus eperlanus (European smelt)
Brite
KEGG Orthology (KO) [BR:
oep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
oep03036
]
134029150 (smc4)
Chromosome and associated proteins [BR:
oep03036
]
Eukaryotic type
Chromosome condensation proteins
Condensin I
134029150 (smc4)
Condensin II
134029150 (smc4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_15
AAA_21
AAA_29
TPR_MLP1_2
Fez1
AAA_23
Motif
Other DBs
NCBI-GeneID:
134029150
NCBI-ProteinID:
XP_062329142
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All DBs
Position
11:17979305..17991866
Genome browser
AA seq
1296 aa
AA seq
DB search
MTSKTSKSSTAKARGKGLQPRDDSEDEFDVPPKERNSNGEEAATSNDPSRGEGAEAVDNR
SFEEILGSIPPPPPPAMTNEPGAPRLMITHIVNQNFKSYAGEQILGPFHKRFSCIIGPNG
SGKSNVIDSMLFVFGYRAQKIRSKKLSVLIHSSDEHQGVHSCTVEVHFQKITDKEGDDYD
VVPNSKFCVSRTANKDNSSAYHINGKKATFKEVGALLRSHGIDLDHNRFLILQGEVEQIA
MMKPRGQTEHDEGMLEYLEDIIGSGRLKEPINILSRRLEHLNEQRGEKLNRVKMVEKEKG
ALEAEKNTAVEFLTLENDIFKQKSQLCQYYVHDFQKKVKVKEEEKQRILEESKDLTERSN
QIATETEKKNQDLKNVEKKQNKLTRYMEGQKEKFTQLDLQDVEVREKLKHTKSKTKKLLK
QLDKNKDMVEEQRGVLVSSENTISEACARREQLEGRKVEEEEKLGAVMESLKGETSGLQR
EKQASEKQLMVLSREVNDTRSRMEVAQSEMDIYLSRHNAALTQLSSARTALATTSSTLQE
RRATVHDLQDKIPLCEKELKKDEAELQRLQREDVGVREEMKGLRQKVEEAKSALSSSRSR
GKVLEALMLQKRSGNIQGIYGRLGDLGAIDGKYDVAISSCCGALDHILVDTIDTAQRCVM
YLKTHNIGFATFIGLDKMKVWEKKMSPISPPEGAARLFDMVRVQDESTRPAFYFALRDTL
VARDLEEATRLAFQRDKRWRVVTLQGQIIEMAGTMTGGGGGVMKGRMGSSITSEVSQVEL
GQMESHLQHQVERGRGCQERKLQLEENIHTLTQQLRDMRNTLEKYTLSLPSLAEQEVQLK
AQIKELEAKEVAAAPDKKHQTQLQKTLDAFKKEYEAATCRAGKVEAEVQRLHTLILDITS
HKLKAQQDRLDQVVRELDACSSTVTKAQVAIKTAGRTLMKAEEAVQRGQGEREEGERLIA
ELTVQLKTLEEQAGDIMKSCQDAEGALPEVQQQYVSVLEEIKALQQQEHALQEESLSVRL
ALQQIDTSCKEYTNKIKHWEKEESRLRLHVVEGQEQQELAGLSPAELEALRGPDAITKHI
SLLEARCAQLRPNLGAIAEYKKKEELFLQRVAELDSITSERDRFKHGVEDVRKQRLNEFM
AGFNIITNKLKENYQMLTLGGDAELELVDSLDPFSEGIMFSVRPPKKSWKKIFNLSGGEK
TLSSLALVFALHHFKPTPLYFMDEIDAALDFKNVSIVACYIYEQTKNAQFIIISLRNNMF
EIADRLIGIYKTHNTTKSVGINPKTIVFQQPEVLTA
NT seq
3891 nt
NT seq
+upstream
nt +downstream
nt
atgacctctaaaacgtctaaaagctctactgcgaaggcgcgagggaagggtttgcagccc
cgggatgactcagaagacgaatttgatgtaccccccaaagaacgcaactcgaatggggaa
gaggctgcgacgtcaaatgatccgtctcgcggggagggagccgaggcagtggataatcga
agttttgaggagattcttggtagcatccctccgcccccgcccccagccatgaccaatgaa
ccgggcgctcctcgcttgatgataacccacatagttaatcagaacttcaaatcctacgcc
ggagagcagattttggggcctttccacaagcgcttctcctgcatcatcggtcctaacggg
agcgggaagtccaacgtgatcgactccatgctgtttgtgttcgggtaccgagctcagaag
atccgctccaagaagctgtcggtgctcatccacagttctgacgagcaccagggggtccac
agctgcacggtggaggtccacttccagaagatcactgacaaggaaggcgatgattatgac
gtcgtccccaacagcaagttctgcgtctccagaacggccaacaaggacaacagctccgcc
taccacatcaacgggaagaaggccaccttcaaggaggtgggagctctgctcagaagccac
ggcatcgacctggaccacaacaggttcctcatcctgcagggcgaggtggagcagatcgcc
atgatgaagccgcgaggccagacagagcatgacgagggcatgctggagtacctggaggac
atcatcggctctggacgcctcaaggagccaatcaacatcctcagccgccgactggagcac
ctcaacgagcagagaggagagaagctgaacagggtgaagatggtggagaaggagaagggc
gccctggaagcagagaagaacactgctgtggagttcctcaccctggagaacgacatcttc
aagcagaagagccagctctgccagtactacgtccatgacttccagaagaaggtgaaggtg
aaggaggaggagaagcagaggattctggaggagagcaaggacctcacggagaggagcaac
cagatcgccacagagacggagaagaagaaccaggatctgaagaacgtggagaagaagcag
aacaagctgaccaggtacatggagggtcagaaggagaagttcacccagctggacctgcag
gatgtggaggtgcgcgagaagctcaaacacaccaagagcaagaccaagaagctgctcaaa
cagctggacaagaacaaggacatggtggaggagcagcgcggcgtgctagtaagcagtgag
aacaccatctcagaggcgtgtgcccgccgggagcagctggagggcaggaaggtggaggag
gaggagaagctgggggctgtgatggagagcctgaagggggagacgagcggcctgcagcgg
gagaagcaggccagtgagaagcagctgatggtgctgagcagggaggtgaacgacacgcgc
tctcggatggaggtggcccagtcagagatggacatatacctgagccgccacaacgccgcc
ctgacgcagctcagctcggccaggacggccctcgccaccacctccagcaccctgcaggag
agacgtgccacagtccacgacctgcaggacaaaatccccctgtgtgagaaggagctgaag
aaggacgaggcggagctccagcggctgcagagggaagatgtgggtgtcagggaggagatg
aaggggctgaggcagaaggtggaggaggccaagtctgccctgtcctcaagccgcagccgg
ggcaaggtgctggaggctctcatgctgcagaagaggagcggcaacatccagggcatctac
gggcgcctgggtgatttgggggcgattgatgggaagtacgatgtggccatctcctcctgc
tgtggcgctctggaccacatcctggtggacaccatcgacacggcccagaggtgcgtcatg
tacctgaagacacacaacatcggcttcgccaccttcatcggcctggacaagatgaaggtg
tgggagaagaagatgtctcccatctccccccccgagggcgcggcccgcctgttcgacatg
gtgcgcgtgcaggacgagagcacacggccggccttctattttgccctgcgggacacgctg
gtggcccgggacctggaggaggccacgcgtctggccttccagagggacaagcgctggagg
gtcgtcaccctgcagggacagatcatagagatggctggcaccatgacgggaggaggagga
ggagtgatgaagggcaggatgggctcctccatcacctctgaggtgtcccaggtggagctg
gggcagatggagagccacctgcagcatcaggtggagcgtgggcggggctgccaggagagg
aagctgcagctggaggagaacatccacaccctcacccagcagctccgagacatgaggaac
accctggagaagtacaccctcagcctgccgagcctggcagagcaggaggtccagctgaag
gctcagattaaggagctggaggccaaggaggtggcagctgctccagacaaaaagcaccag
acgcagctgcagaagaccctggacgccttcaagaaagaatacgaggcagccacctgcagg
gcagggaaggtggaggcagaggtgcagcgcctgcacaccctgatcctggacatcaccagc
cacaagctgaaggcccagcaggaccgtctggaccaggtggtcagagagctggacgcctgc
tcctccaccgtcaccaaggcccaggtggccatcaagactgctgggcggaccctgatgaag
gcggaggaggcggtgcagcgggggcagggggagcgggaggagggcgagaggctcatcgct
gagctcacagtgcagttgaagactctggaggaacaggctggagacatcatgaagtcctgc
caggatgcagagggggcgctaccagaggtgcagcagcagtacgtgagcgtgctggaggag
atcaaggcccttcagcagcaggagcacgcgctgcaggaggagagcctcagcgtcaggctg
gccctgcagcagatagacacctcctgcaaggagtacaccaacaagatcaagcactgggag
aaggaggagtccaggctgcgcctccacgtggtggagggccaggagcagcaggagctggct
gggctgagccctgcggagctggaggccctcaggggccctgacgccatcaccaagcacatc
tccctgctggaggcacgctgcgcccagctcagacccaacctgggggccatcgcagagtac
aagaagaaggaggagctgttcctgcagcgcgtggctgagctggacagcatcacctctgag
agggaccgcttcaagcacggtgtggaggacgtccgcaagcagaggctcaacgagttcatg
gccggcttcaacatcatcaccaacaaactgaaggagaactaccagatgctgaccctaggg
ggcgacgcagagctggaactggtggacagcctggaccccttctctgagggcatcatgttc
agtgtgcgtcctcctaagaagagctggaagaagatcttcaacctgtctggaggagagaag
accctgagctctctggcgctggtgtttgctctgcaccacttcaagcccacgcccctctac
ttcatggacgagatcgacgccgcactcgacttcaagaacgtctccatcgtggcttgctac
atctatgagcaaaccaagaacgcccagttcatcatcatctccctaaggaacaacatgttt
gagatcgccgaccgcctcatcggcatctacaaaactcacaacaccaccaagagcgttggc
ataaaccccaaaaccatcgtgttccagcagcctgaggtgctgactgcctga
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