Osmerus eperlanus (European smelt): 134029260
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Entry
134029260 CDS
T10927
Symbol
tsku
Name
(RefSeq) tsukushi isoform X1
KO
K08130
tsukushi
Organism
oep Osmerus eperlanus (European smelt)
Brite
KEGG Orthology (KO) [BR:
oep00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
oep00535
]
134029260 (tsku)
Proteoglycans [BR:
oep00535
]
Extracellular matrix (ECM) proteoglycans
Small leucine-rich proteoglycan (SLRP) family
class IV
134029260 (tsku)
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GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_1
LRR_5
LRR_14
LRRNT
LRR_EndoS
LRR_RPS2
Motif
Other DBs
NCBI-GeneID:
134029260
NCBI-ProteinID:
XP_062329309
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All DBs
Position
11:2830522..2839268
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AA seq
349 aa
AA seq
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MVKTRMTLLWVSMSLLAWVHAGEVKNCHPSCHCEVESFGLFDSFSLTRVDCRGVGPSNIP
IPLDTAHLDLSSNSIGLLSDTMLSGPGYTTLVSLDLSSNLISQVSSKALSRLRYLQTLDL
SHNSLDSLAQGCFSGLPLVDVDLSHNRFRDFDLDVFITRGHGEPMSVDLSHNWLSSVSRG
PHGGALHVQSMTLAENRLRSVPKLVGIPLRDLNLDGNPISCIEEGAFVELKDLVHLSLSG
LSELSDIKPNSFSGLHNLQVLDLSSNINLKTLTPAVFIGLVSLQELNLSNSGVTSLPNNM
LSHLPSIRSITLGPSTHCWRTQKQGQFHRQLGQIQFDHVLTCNIKGIVS
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atggtcaagacgaggatgactcttctgtgggttagcatgtccctgcttgcctgggttcat
gcaggtgaagtaaagaattgccaccccagctgccactgtgaagtggagagctttggtctg
ttcgacagcttcagcctgaccagggtggactgcaggggagtgggaccctccaacatcccc
atccccctggacacagcacatctagacctctcctccaactccataggcctgttgtctgac
accatgctttctggccccggctacactacgctggtcagcctggacctcagtagcaatctc
atcagccaggtcagctccaaggccttgtcccggctgcgctatctccagaccctggacctg
agccacaactctctggacagcctggctcagggctgcttctctggcctgcctctagtggat
gtggaccttagccacaaccgtttccgggactttgacctggatgtgttcatcaccaggggt
cacggcgagccaatgagtgtggatttgtcccacaactggctgagctcggtctccaggggc
ccacatgggggtgcgctgcatgtccagagcatgacactagcggagaaccggctgaggagc
gtccccaagttggttggaattccattgcgggacctgaacctggatggaaatcctatctcc
tgcattgaggagggggcgtttgtggagctgaaggaccttgtacacttgtctctcagtggc
ctcagtgagctctcagacatcaaaccaaacagctttagtggcctgcacaatctccaagtt
ttggacttgtccagcaacatcaatctcaagacactgaccccagcagtgttcattgggctt
gtttccctgcaggagctcaatttgtctaactctggagtaacatctctgccaaacaacatg
ctgagccacttgcctagcattaggagtattactttaggcccaagcacacattgctggaga
actcagaaacaaggacagtttcacaggcagctaggtcaaatccagtttgaccacgtacta
acctgtaacatcaagggcattgtttcttga
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