Osmerus eperlanus (European smelt): 134029331
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Entry
134029331 CDS
T10927
Symbol
brip1
Name
(RefSeq) Fanconi anemia group J protein isoform X1
KO
K15362
fanconi anemia group J protein [EC:
5.6.2.3
]
Organism
oep Osmerus eperlanus (European smelt)
Pathway
oep03440
Homologous recombination
oep03460
Fanconi anemia pathway
Brite
Enzymes [BR:
oep01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
134029331 (brip1)
DNA repair and recombination proteins [BR:
oep03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
134029331 (brip1)
FA (Fanconi anemia) pathway
Downstream FA components
134029331 (brip1)
BRITE hierarchy
Other DBs
NCBI-GeneID:
134029331
NCBI-ProteinID:
XP_062329401
LinkDB
All DBs
Position
11
AA seq
1579 aa
AA seq
DB search
MPPPTVEYTIGGVKIQFPCKAYPSQLAMMNSIVRGLNHSQHCLLESPTGSGKSLALLCSA
LAWQQAHLAKLEEGANTQEGKSQAEAKKTDVNTPCQCACHSKATWVPTTPKPAMVDLTVI
DTNMGGLNTSPSADKEFKPKSQSLASRLSEKLQSSSDKDDDFQPDRKRIRTPLVDQKGRK
RRCLEKGVVFIDDESEEERPGVSGKTWSMELSAQAQSMDLPSACCSPAACSLCPCASPKG
GLTGPGGKSSKDKEKDGKKKVPKIFFGTRTHKQITQISHELKRTLYSRVPMTILSSRDHT
CVHPEVVPHSNRNERCKELLESKNGYSCRYYHGVHKMREQSTLQGVHGLHQAWDIEDLVR
LGGRLRSCSYYAARELMQDALIIFCPYNYLLDPLIRESLEINLKGQIVVLDEAHNIEDCA
RESASYALSEAQLLVVREELDGMVNHNIRRSHHEPLRAFCCSLINWIKESCSLLAEREYE
MSCKVWHGKEVLGIFHVMGITADTFDLLQKHLAAALEKEERVGVVNGKEDVVEIPTISSV
SSSILKSLFMVLDYLYRGNSRFAEDYRVALQQTYVWTTQPDVPDAQGFFARPQRRGRRQG
GAQRTKTLVHTLSFWCLNPAVAFSDLSECVRTIVLTSGTLSPMGSFSSELGVKFSIQLEA
SHVISKSQVWVGTIGSGPQGRKLCATFQHAETYAFQDEVGALLLQVCQAVGRGVLCFLPS
YKMLDKLRDRWTNTGLWDKLQERKTVITEPRGGAKGDFDQLLQTYYDAIKCCGERDGALL
LAVCRGKVSEGLDFTDDNARAVVTIGIPFPNIKDLQVELKMKYNDQHCKARGLLPGSRWY
EIQAYRALNQALGRCIRHKNDWGALILVDDRFRNNPNKYITGLSKWVRQLVKHHDTFNGA
MQSLTNFSQCQQEAVEGHAGSPSLNGPVSSPASLCLMTLEQPQSDSMVGSLLGAPVPQAC
PEGPKVCHQTNSSRVLSEVSEPPVVPGCSDDADGRAAEQSPAMPFTPQSSYAKTPTRPLY
DLFTSTPTRNRFKKPIFQARDSGRGANQFAKSTLTENKENQQDVTCQIEERQQPSQGQGV
CEETNRTEALQSCQGLELSPLQVPLTCEPRQTAVDEDPFLQEGEEDEEDETIFFTPELFE
DDEDEGSPQKERGPLSLPKTGCGAGLEGMVVDNHPIFNRTDQVSENILALDDQAKLQVQE
QIQGSVKVQGQEQKNQGQNRQGNSRTRKLSRSRQKDPSTLCSAENCAKSCGDGQFQSGKH
TLTKTQAQARCHQRGKARVRIGLLTNPSRVVPAQTTNKVTNVGTTKERSANVTCLQTEEA
GGEKTVSSANNLISPLLGGMGQDSSCKTGVFCKQYQLALRPTWRRTVKKEQSDLGTTENI
NRVQFDIVTPEQEGINIQRSCNRKRKRANMASERRKRAYDQTPCTTGLFCTKCSLELLPV
AEGVLRSAKCELERLPILGDHISCDVDAKVRCRCTPPSPTQPCDSAALLMVQDLQALQSL
RNSLQPFCKNSTAYNAIWDPAECSVTRLLHCIGCASQDPSSASVMAFEIHHPRDPALDQI
WLAPAAVQFCSLIQTHNPV
NT seq
4740 nt
NT seq
+upstream
nt +downstream
nt
atgcctccacccaccgtggaatacaccataggaggggtgaagatacaatttccctgcaag
gcttatccatcccaactggccatgatgaattcaatcgttcgagggttgaaccacagtcag
cactgtcttctggagagccctactgggagtgggaagagcctggccctgctgtgttcggcc
ctggcctggcagcaggcacaccttgctaagcttgaagaaggagccaacacacaggagggg
aaaagccaagctgaggccaaaaaaacagacgttaacacaccctgccagtgtgcgtgccac
agcaaggccacatgggtccccactacgcccaagccagccatggtggacctgactgtcata
gacacaaatatggggggacttaacacatctccttctgcagacaaggagttcaaacccaag
agtcagtcattggcctctcgtctgtctgaaaagctgcaaagctcctcagacaaggacgac
gactttcagcctgacagaaaacgcattcgcaccccattggtcgaccagaagggtcgtaag
aggagatgtctggagaagggggtggtcttcatagacgacgagtcagaggaggagaggcca
ggcgtgtctgggaagacctggtccatggagctgagcgcccaggcccagagcatggacctg
ccctccgcctgctgttctccagcggcctgctctctctgcccatgtgcctcgcccaaagga
gggctaacgggcccaggcggcaagtcttcaaaggacaaagagaaagatggcaaaaagaag
gtgccgaaaatcttctttggcacgcgcacccacaagcagatcacgcagatctcccacgag
ctcaagcgcaccctctactccagggtgcccatgaccatcctgtccagccgagaccacacc
tgcgtccacccagaggtggtgccgcactccaaccgcaacgagcgctgcaaggaactgctc
gagtccaaaaatggctactcgtgccgctactaccacggagtgcacaagatgcgtgagcag
agcacgctgcagggggtccacgggctgcaccaggcgtgggacatcgaggacctggtccgc
ctgggcggccgcctgcgctcctgctcctactacgccgcccgcgagctcatgcaggacgcc
ctcatcatcttctgcccctacaactacctgctggaccccctcatcagggagagtttggag
atcaacctgaaggggcagatcgtggtgctggacgaggcccacaacattgaggactgcgcc
cgcgagagcgccagctacgcgctcagcgaggcccagctgctggttgtccgggaggagctg
gacggcatggtcaaccacaacatccggcgctcccaccacgagcccctgcgagcgttctgc
tgcagcctcatcaactggataaaggagagctgcagtctgctggcagagagggagtatgag
atgtcatgcaaggtgtggcatgggaaggaggtcctggggatcttccatgtcatgggcatc
accgctgacacctttgacttgctgcagaagcacctggcggcagcgctggagaaggaggag
cgtgtgggcgtggtgaacgggaaggaggacgtggtggagatccccaccatcagctccgtg
tcctcctccatcctcaagagcctgttcatggtgctggactacctctacaggggcaacagc
aggtttgcggaggactaccgcgtggccctgcagcagacgtacgtgtggaccacccagcca
gacgtcccagacgcccagggcttcttcgcccggccccagcgcaggggccgacgccaaggg
ggggcccagcgcaccaagaccctggtccacacgctcagcttctggtgcctcaaccccgcc
gtggccttctcagacctgagtgagtgtgtgcgcaccatcgtcctgacctccggcacgctg
tcgcccatgggctccttctcctccgagctgggggtcaagttctccatccagctggaggcc
agccacgtcatcagcaagtcccaggtgtgggtgggcacgattggctcggggccgcagggg
cgcaagctgtgcgccaccttccaacacgcggagacctacgccttccaggacgaggtgggc
gccctgctgctgcaggtgtgccaggctgtgggcaggggcgtgctctgcttcctgccctct
tacaagatgctggacaagctgcgtgatcgctggaccaacacaggcctctgggacaagctg
caggagaggaagactgtgatcacagagcctcgcgggggggccaagggagactttgaccag
ctgctgcagacctactatgacgccatcaagtgctgtggggagagagatggagcactgctc
ctggccgtgtgcaggggcaaggtgagcgaagggcttgacttcacggacgacaacgccagg
gctgtggtcaccattggtattcccttcccaaacatcaaagacctgcaggtggagctgaaa
atgaagtataatgatcagcactgcaaagccagggggcttctacctggcagtcgctggtat
gagatccaggcgtaccgagcactgaaccaggctctggggaggtgtatccggcacaagaat
gactggggtgccctgattttggtggatgaccgtttccggaacaaccctaacaagtacatt
acaggtctgtccaagtgggtgcgtcagctggtgaagcaccacgacacctttaacggggcc
atgcagtctctcaccaacttctcccagtgccagcaggaggcagtggagggccacgcagga
agcccaagcctgaatggcccagtctcatcacctgctagcctatgtttaatgactctggaa
cagccgcaatctgacagcatggtgggctctctcctcggagccccagtacctcaggcatgc
ccagaggggcctaaagtgtgccatcagaccaacagctccagggttctctcagaagtttcc
gagcccccggttgtccccgggtgtagtgatgatgcagatggcagagcagcagagcagagt
ccagcgatgcccttcacccctcagagcagttatgccaagacaccaactcgacccttgtat
gacctcttcacatccaccccaactagaaaccgcttcaagaaaccaatctttcaggcaaga
gactctggcaggggtgccaatcagtttgcaaaatcaaccttaacagaaaacaaggagaac
cagcaggatgttacctgtcagatcgaagaaaggcaacaaccttcccagggacaaggtgtt
tgcgaagagactaataggacagaggccctgcaatcctgtcaagggttggaactctcccct
ctgcaggttcctctgacctgtgaaccaagacagactgctgtggatgaagaccctttcctg
caagagggggaggaagacgaggaagacgagactatctttttcactccagagctttttgag
gatgatgaggatgaaggtagccctcagaaagagagagggcccttgtctcttcccaagacg
ggttgtggggcaggtctggaaggcatggttgtggacaaccatcctatctttaaccggaca
gaccaggtgtctgaaaacattttagccctagacgatcaagctaaactgcaagtacaggaa
caaattcaagggtcagtgaaagttcagggacaagagcagaagaatcaggggcagaacagg
cagggaaacagcaggacacgcaaactgtccaggtccagacagaaagatccctccacctta
tgctcagcagaaaattgtgcgaaatcttgtggggatggacagtttcaatctgggaaacat
actctaacaaagactcaggcccaggccaggtgccaccagcgtggaaaagccagggtcaga
atagggctgctcaccaatccctctcgggttgttccagctcagaccacaaataaggtgacc
aatgtcggaacaaccaaggagcggtctgctaatgtgacctgtctgcagactgaggaggca
ggaggagagaagactgtgtcatcagcaaacaacctgatatctccattgctaggtggtatg
ggtcaggacagtagctgcaagactggagtattctgtaaacagtaccagctagctctcaga
ccaacgtggagacgtacagtaaagaaagaacaaagcgatttgggcactactgagaatatt
aacagagtgcagtttgacattgtcacaccggagcaggaaggtataaatatacagaggtca
tgtaatcggaagcggaaaagagctaatatggcatctgaaagaagaaagagagcttatgac
cagacaccttgtactacaggactcttctgtacaaagtgtagcctggagctactgccagtg
gcagagggtgtgctgcgcagtgccaaatgtgagcttgaacgcttgcccattctgggggac
cacatatcctgcgacgtcgatgccaaagttcggtgtcggtgcacaccacccagtcccaca
caaccgtgtgactcggctgccctgctcatggttcaggacctccaagccttgcagagctta
aggaactctctccagcccttttgtaaaaactcaacagcatacaacgccatctgggaccct
gctgaatgctcagttaccaggctcctgcactgcataggctgtgcatctcaagacccctca
tctgcaagtgtaatggcatttgaaatccatcacccacgggatccagcactggaccagatc
tggttggcacctgctgcggttcaattctgctcccttatccaaacccacaatcctgtgtag
DBGET
integrated database retrieval system
