Osmerus eperlanus (European smelt): 134029353
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Entry
134029353 CDS
T10927
Symbol
dscaml1
Name
(RefSeq) LOW QUALITY PROTEIN: cell adhesion molecule DSCAML1
KO
K06768
Down syndrome cell adhesion molecule-like protein 1
Organism
oep Osmerus eperlanus (European smelt)
Brite
KEGG Orthology (KO) [BR:
oep00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
oep04515
]
134029353 (dscaml1)
Cell adhesion molecules [BR:
oep04515
]
Immunoglobulin superfamily
Other
134029353 (dscaml1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
fn3
Ig_DSCAM-DSCAML_C
Ig_3
I-set
Ig_2
ig
Pur_ac_phosph_N
V-set
ChitinaseA_N
Ig_6
fn3_2
DUF1461
Ig_5
Motif
Other DBs
NCBI-GeneID:
134029353
NCBI-ProteinID:
XP_062329428
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All DBs
Position
11:7408461..7442058
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AA seq
1165 aa
AA seq
DB search
MWRVTLLLLYAVNKVISEDVVSTRLYFVNAVQQRVTFSSSQGVSLPCPAGGAPHATLRWY
LATGDDIYDVPHIRHVHANGTLQLYPFSPSAFNSYIHDNDYFCTAENQAGKIRSPSIRFK
AVFREPYTVRVADQRSMRGNVAVFKCLIPSAVQEYVSVVSWEKDTVSILPVPSEPPQNVR
AISVTSDEAVITWVEPPRVTLHGVLKGYRVVFWSLFPDGEWGEMQNITTSREQVELRGLE
KFTNYSXQVLAFTQAGDGVRSNVLYIQTREDYPGPPAGIKAVPSSASSVVVSWLPPHKPN
GIIRKYNIYCSSPGSGQPAPSEYEANPELLFYRITHLNRGQQYLIWSAAVTTAGRGNISE
KVTVEPAGKAPAKILSFGGTHTTPWMKEVRLPCSSVGEPNPTIKWTKDSEDAAIPVTLDG
QRLILANGTLVLRSVKAEDSGYYTCTATNTLGFDTIIVNLLVQVPPDQPRLTVSTTSTSS
ITLAWIPGDNGGSSIRGFVLQYSVDNTEEWRDVFISSSERSFRLDSLRCGTWYKVKLAAK
NSVGAGRISEIIEAKTHGREPQFNKDQPVFTHINSSHARLNLQGWASGGCPITSVLLEFR
PKGTWAWQSVRTNATVDVFLAELREATWYEMKMKACNSAGCGNQSSQFATLDYDGSTIPP
IKSPLEKNDDVKKLFSIGCPVILVTVGVALLFIIRKKRKEKRLKRLRDAKSLAEMLISKN
NRSFDTPVKGPPQGPRLHIDIPRVQLLIEDKEGIKQIGEDKATIPVTDTEFNQSGNPQSF
CTGVSVHHPALIQNTGPLIDMSDIRPGTNPVSRKSVKSAHSTRNRYSSQWTLTKCQSSTP
ARTLTSDWRTVGSQHGITVTESDSYSASLSQDTDKGRNSMVSTESASSTYEELARAYEHA
KLEEHLQHAKFEITECFISDSSSDHMTTGTNDNADSMTSMSTPSEPGICRFTASPPKPQD
YDRGKNVAVPIPHRAKSDYCNLPLYMKSDPFFRKQSDHHEPCPVVPPRETSVRSLAQRAY
HSQGRHQPLDPAKQSQNQPQQQALTLGHAGLASLSSSGASGSGGAAAAAGGGGASGGSST
SSSLLQRTLTMPGSSSSSAQNAAAAAAATASSTAGGGAVGGGTPGGVSSKVGGSRDSLME
SSSSGLGRLQKGGAGGAYSKSYTLV
NT seq
3498 nt
NT seq
+upstream
nt +downstream
nt
atgtggcgggtaactctgctcctcctgtatgctgtaaataaagtgatcagtgaggatgtg
gtctccaccaggctgtactttgtgaacgccgttcagcagagagtgaccttctccagctcc
cagggggtgtccctgccctgccccgcgggcggtgccccccatgccaccctgcgctggtac
ctggccaccggagacgacatctatgacgtgcctcacattcgccacgtgcacgccaacggc
accctccagctgtaccccttttcgccgtcggcgttcaacagttacatccatgacaacgac
tacttctgcacggcagagaaccaggcggggaagatacgcagccccagcatacgattcaaa
gcagtgttcagggagccctacacggtgcgcgtggctgaccagcgctccatgcgggggaac
gtggcggtcttcaagtgcctcatcccgtctgctgtgcaggagtacgtcagcgtggtgtcc
tgggagaaggacacggtctccatcctgccagtcccgagcgagcccccccaaaacgtgcgg
gccatctcggtgacgtcggacgaggccgtcatcacgtgggtggagcctccgcgggtgacg
ctgcatggcgtgctgaagggctaccgcgtcgtcttctggtcgctgttccccgacggagag
tggggggagatgcagaacatcaccaccagcagggagcaggtggagctgcgcggcctggag
aagttcaccaactacagcngtcaggtcctggccttcacccaggctggggacggggtccgc
agtaacgtgctctacatccagacccgcgaagactaccctggacccccagctggcatcaaa
gctgtgccctcctctgccagcagtgtggtggtatcctggctcccccctcacaagccaaat
ggtatcatccgcaagtacaatatctactgctccagccctgggtcgggccaaccggccccc
agtgagtacgaagctaacccagagttgctgttctatcggatcactcacctgaaccgtggt
caacagtacctcatatggtctgctgccgtgacgaccgccggccgcggcaacataagcgag
aaggtcactgtggagcctgctgggaaggccccggctaagattctgtcctttggggggacc
cacaccactccctggatgaaggaggtgcgtctgccctgcagctcggtgggagagcccaac
cccaccatcaagtggaccaaagacagtgaggacgccgccatccctgtcactctggatggt
cagcgtctgatcctagccaatgggacgctggtcctgcgctctgtgaaagccgaggattct
gggtactacacgtgcacggccaccaacacgctggggttcgacaccatcatagtcaacctc
ctggtgcaagttcctccggaccagcctcgtctgacggtgtccaccacctccacttcctcc
atcactctggcctggatccctggagacaacggagggagctccatcagaggcttcgtgctc
cagtactcggtggacaacacggaggaatggcgtgacgtgttcatcagctccagcgagcgc
tcgttccgcctggacagtctgcgctgtggcacctggtacaaggtcaagctggccgccaag
aacagcgtgggcgccggacgcatcagtgagatcatcgaggccaagacccacgggcgggag
ccccagttcaacaaggatcagcccgttttcacccacatcaactccagccacgcccgcctc
aacctgcagggctgggccagcggcggctgtccaatcacatccgtgctcctggagttccgg
cccaagggcacgtgggcatggcagagcgtccgcaccaacgccacggtggacgtgttcctg
gcagagctccgtgaggccacctggtacgagatgaagatgaaggcgtgcaacagcgccggc
tgtgggaaccagagctcccagttcgccacgctcgactacgatggcagtacgatcccgcca
atcaaatcccctctggagaagaatgacgacgtgaagaagctgttttccattggctgtccc
gtcattttggtcactgtgggcgtggccttgctcttcatcattcgcaagaagcgcaaagag
aagaggctgaagagactgagagatgccaagagcctggctgaaatgctgatcagtaagaac
aaccggagcttcgacacccctgtgaagggccccccccaggggcccaggctgcacatagac
atccccagagtccaactgctcatcgaagacaaggagggcatcaagcagataggtgaagac
aaggccacaatccctgtgacggacacagagtttaaccaatcagggaacccacagagcttc
tgtacgggtgtgtctgtgcatcaccccgccctcatccagaacacaggacccttgattgac
atgtcggatatcagaccaggaaccaaccctgtctccaggaagagtgtgaagtcggcccac
agcaccaggaaccgttactccagccagtggaccctgaccaagtgccagtcgtccacgccc
gcccgcaccctcacgtcagactggcgcacggtgggcagtcagcatggcatcaccgtcacc
gagagcgacagctacagcgccagcctgtcacaggacacggacaagggtcgtaacagcatg
gtgtcgacggagagcgcctcgtccacctacgaggagctggcgcgggcgtacgagcatgcc
aagctggaggagcacctgcagcacgccaagttcgagatcaccgagtgcttcatctccgac
agttcctccgaccacatgaccacggggaccaacgacaacgccgacagcatgacgtccatg
agcacaccgtcggagccgggcatctgccgcttcaccgcctcgccgcccaagccccaggac
tacgaccgcgggaagaacgtggctgtgcccataccacacagagctaagagtgattactgt
aacctgcccctttacatgaagtccgacccattcttcaggaagcagtcggaccaccacgag
ccgtgccccgtggttccaccccgggagacgtccgttcggagtctggcccagagggcctac
cacagccagggccggcaccagcccctggacccggccaaacagagccagaaccagccccag
cagcaagccctcaccctaggccacgcaggcctggccagcctctcctcctctggagcctct
gggagtggtggagcagcagcagcagcaggaggaggaggtgcgagtggaggatctagcacc
tcctcctcgctcctccagaggactctcaccatgcccggctcctcctcctcctcggcccag
aatgctgccgctgcagctgcggccacggcctcctccactgccggcgggggggccgtgggg
gggggcacccccggaggggtctcctccaaggtgggggggtccagagactctctcatggag
agcagctcctcaggactgggcagacttcagaaggggggggccgggggggcctactctaag
tcctacactctggtgtag
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