Osmerus eperlanus (European smelt): 134029365
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Entry
134029365 CDS
T10927
Symbol
brca2
Name
(RefSeq) breast cancer type 2 susceptibility protein
KO
K08775
breast cancer 2 susceptibility protein
Organism
oep Osmerus eperlanus (European smelt)
Pathway
oep03440
Homologous recombination
oep03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
oep00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
134029365 (brca2)
03460 Fanconi anemia pathway
134029365 (brca2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
oep04121
]
134029365 (brca2)
03036 Chromosome and associated proteins [BR:
oep03036
]
134029365 (brca2)
03400 DNA repair and recombination proteins [BR:
oep03400
]
134029365 (brca2)
Ubiquitin system [BR:
oep04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
134029365 (brca2)
Chromosome and associated proteins [BR:
oep03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
134029365 (brca2)
DNA repair and recombination proteins [BR:
oep03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA complex
134029365 (brca2)
FA (Fanconi anemia) pathway
Downstream FA components
134029365 (brca2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCA-2_helical
BRCA2
BRCA-2_OB3
BRCA-2_OB1
BRCA2DBD_OB2
Tower
BRCA2_TR2
Motif
Other DBs
NCBI-GeneID:
134029365
NCBI-ProteinID:
XP_062329445
LinkDB
All DBs
Position
11:complement(12795123..12805340)
Genome browser
AA seq
2501 aa
AA seq
DB search
MWDDISFKEIKIGKLLCITYIFLLFRFSRSRNSPGKTQEQESFELLSTPKPSVRNYVRHI
TESLGAQMDSNVSWTSSLNTPPTLSPTIILSKNKDSAVPVSLSADREIIFVRKLFPSLSN
TAGPELPSENTATSVQPSNLSPEGRIWRQTLPDAIKDGVVRSTVASVLDGSEDVLSVFFS
NSSSALRRVKVKERIKRKQSSSTKGQDPLTVGTDQSSEMAEDEHSKDITVSSRITTKTGD
MGITQWTPISLSDISDCDLDTLSHDVTQTGQVEPSPVPAKPQTGGAVSCQPVGSQLIESG
VKGSLDCSFTRKTRKFVYCIQNPQPPAQGNYSQKTDASNGNVLRGDRGHILNMRGQRTEE
LNKNPPDENRQQEQGCVTVPPAPAKDQHLEMSQLCRVFAQDFSQMVDSSKADNNKMDPLQ
HGFSASACLSAVRRRKRQQSSKRESSGTNESVQHQRGDYQNDDRLICVSPSSNLTNLTVQ
DSGYASTSITQINRSSNQPPCSGFKTGNNKTISVTPQALQKAKSVFEDLKESLSLNITDA
STSVSQVNQDMYPCNESSLCTEVSFVKPLNSVKKSQNTVCGTQSPLTASQHADVTELCSL
LEDADSQFEFTQFRSAKSSSRVPESVAPHQLSEKELDPEFLTGIDFDDSFNSEKQFVKMA
NPSNISENKVQMHTSSFDMDKSDVKSSPKVAVGFITAEENHVRVSVQCLSKARALFADLD
ESCEATRDACFDSSVIASAKLIEPLPLKQQLDEASNVEHLEPVDGDTADSIDLMCIEEDI
LSNSTDNHKTIAGCSSLTAVHLSDKVDVPDESVEPGKTPPYVLHSHKSHSGFQMSSGKGV
TVSAKAIQEACVIFKDYEVLESVACVSPARFKPCEEVPATCSGRFERKNCGFNAAGATRA
HVSGKPLLKPEALFSGSGTLGMNSAVKTLKDHQWDSDGGFKKPCTKPATVSAETLLSERA
LAHNVNSLQRGCGFSTASGKRVAVSDGALQKAKALLSEFNEDGTEKKEARISHTSPTKTL
TENLGGFKTASGKGVALSAKALEHTKDFFKDFDANTDASKLADTNEKSVEKRNTHMNAGK
SNCGFTTAGGKKVHVSEKSLLRTKALLMESPRKDCGDINLTKPACRERASGSAGDHTHPS
PSDNDADANQLPNTVSDSLDELGKGFSFSTASGTTICVSDTSLLKAKSLLNECERDVATS
DRLDSANTLSLKLPQKPLCNTANGKAVPVSEKALQEVKSVSWETSHIKYDTIAQSPAECS
FGFSTASGKGVHVSEKALKAAFDKFRETENNIVQCEPISEKSDYKTLLPAHDQLEPVTAR
KPENRDTVLTRDGREHGEGSSLLNLESLGFSGCTDTQQEYFAQEAMDSTKALLEDEHLSG
QSSRSFAFHKNPLEKNPACSEQAEYRSRATGKRTGEDADVKEQPPLKRRLLAEFDRTLDC
NKRSITPVKSCSDGMLKDRRVFKYNVSLQPNITRPFRDPKSHVGLTLNKAESQNRRPEPT
PADIKPSTARGAVFVPPFRKNIKTETHRSNFQQDKGGTPVVLVPQFGKPTSRKTDKDPQP
PNNNTTHHLFKILAKTSEPSPALETKDNQSPEMETNYSDKVNKMKIDPQSHEKINQPSGD
DEQDVSYTARQDTITEGSTSDQASPGSHEVDLQSLQLALDMQIMRLRKKKRQNIRPVPGS
LFLAKTSGVPRVALREAVRGRCPVQHTQKQLYGYGVHQQVRQISSENAEPFCFHCQHFFK
REALAAGVQLADGGWLIPRKDGRAGKVEFYRALCDSPGVDPQLISEAWVYNHYRWIVWKQ
AAMERCFPEVMGGLCLTPEQVLLQLKYRYDVEVDHSRRPALRKIMERDDTVAKTLVLCVC
GVVSRGQNRPSRAEASSPQVAGSKADPRFGVIWLTDGWYAIKAQMDAPLTAMLAKGRLVV
GGKLVIQGAQLVGPQTACSPLEAPESLMLKIWANGTRPARWDAKLGFLCDPRPLLFPLSS
LYGDGGPVGCVDLVVLRSYPVQWMERKPDGGFVFRTGRAEEKEARRHSDGKHKAMEVLFA
KVQAQFEKEDNGKKTRGRRGSLRRQDIEDLQDGEELHEAVQNDPAYLEASLSEQQRKVLT
SYRSSLGERRQAQLQESFRRALEADGGHGPNREVTPVWKLCVADSRDQRGTSVCMLSIWR
PSMDLQSFLREGCRYRAHHLSTSEGRKRSGGGSVQLTTTKRTQFQGMQASQDWLAGNYHA
RVAVSFHDLRNPEFQPFCGEVDIVGYVISITSSQGFSQVVYMVDGKLDFVKVHSYSSLVQ
LGLEDLVKPRALLAVSNLQLRTLSSPIPGLHASDLALFTSNPKDSHLQEAFTQLRALVQG
QELFFLSAEERLSNLIPSDPSSFSSPALQPRTPAWKTQDGGIHKTPQQPIRGFGSMTPIN
SSLPPPISSSGKLDPKSLKRKRGLDSLCRIPSPPPIYPLGTMTTPCVNKTFNPPRRSDTP
AQTPAPRPAPPEVEDEWVNDEELAMIDTQALYSGLGEEVTR
NT seq
7506 nt
NT seq
+upstream
nt +downstream
nt
atgtgggatgacatttctttcaaagaaattaaaattgggaaactattgtgcattacatat
atttttttattgtttcgtttcagcaggtcaagaaatagtccaggtaaaacccaggagcaa
gaaagttttgagttgctgagcactccgaaaccatctgtgagaaactatgtcaggcacata
acagaaagccttggtgcacagatggactccaatgtgtcgtggacaagttcacttaatacc
ccacctaccctatcacccaccattatcttgtctaaaaacaaggacagtgccgttcctgta
agtctgtctgcggaccgggagatcatttttgtgcggaagctcttcccctcactctcaaat
actgcaggtccagagttgccatcagaaaacactgcaacttcagttcaacccagtaatctt
tcaccagagggcaggatctggaggcagacattgccagatgctatcaaggacggagttgtt
cgcagcacagtggctagtgttttggatggaagcgaagatgtcctctccgtattcttcagt
aatagcagctctgctttacgaagggttaaagttaaggaaagaattaaaaggaagcagtcc
agctcaacaaagggacaagaccctttaactgtgggcacggaccaatccagtgagatggca
gaggacgaacacagcaaggacatcacagtgtcctcaaggatcaccacaaaaactggagat
atgggcataactcagtggactccaataagtctatcagatatatcagattgtgatttggat
acattatctcatgatgtgacacagactggccaagtggaacccagccccgtccctgctaaa
ccccagacaggaggagcagtatcctgccagccagtggggtcccagctgattgaatctggg
gttaaaggttcactagactgctctttcaccaggaaaactagaaagtttgtatactgtatc
cagaatccccagcccccagcacaaggaaactattctcagaaaacggatgcatctaatgga
aatgtactcagaggtgacaggggacatattctcaacatgagaggacaaaggactgaagaa
ttgaacaagaacccccctgatgagaatcggcagcaagaacagggatgtgtgactgtcccc
cctgcaccagccaaagaccagcatctggaaatgtcccagctttgtagagtgtttgcacaa
gatttcagtcaaatggtggactctagtaaagcagacaacaacaaaatggatcctcttcaa
cacggtttctctgcctcagcctgcctctcagcagtgagacgaagaaaaagacaacagtcg
tctaaacgagagtcaagtggaacaaatgaatctgtccagcatcaacgcggggattaccaa
aacgacgacagacttatctgtgtgtctccgtccagcaacctcactaatctcacagtacag
gatagtggctatgcctccacctcaataacacaaataaacagatcatcaaatcaaccacca
tgctcgggctttaaaacgggcaacaataagaccatttctgtaacaccacaggcactacag
aaagctaagtctgtatttgaggacttaaaagaaagcttgtcattaaatattactgatgcc
agtacatctgtcagtcaagtcaaccaggacatgtacccttgtaatgaaagcagcttatgc
actgaagtcagttttgtaaaaccactgaatagtgtgaaaaagtctcagaacactgtctgt
ggtactcaaagccctttaacagcctcacagcatgctgatgttaccgagttgtgcagtctt
ttagaagatgcagacagccagtttgaattcacacagtttagatctgcgaagtcgagttct
cgtgttccagaaagtgtggcccctcaccagttatctgagaaagaactggaccctgaattt
cttacaggaatagattttgacgacagctttaactctgaaaaacagtttgtaaagatggca
aaccctagcaatatctctgaaaacaaagttcaaatgcacactagcagctttgatatggac
aagtctgatgtcaaaagtagccctaaagtagccgtaggtttcataacagctgaagaaaat
catgtgcgggtttcagttcagtgtctgagcaaagcgagggccttgtttgcagatttagac
gagagctgtgaggcaacaagagatgcatgttttgacagctctgtgatagcatcagctaag
ctaattgaacccttacctttgaaacagcaacttgacgaagcttctaatgttgaacattta
gagcctgttgatggtgatactgctgacagtattgacttgatgtgcattgaagaggacatc
ctatcaaattcaacagacaaccacaagactattgcaggttgttcaagtttgactgcagtt
cacctatctgataaagtggatgtacctgatgaaagtgttgaacctgggaagactccaccg
tacgtgctacattctcataaatcacacagtggttttcagatgtccagtggtaaaggggtc
actgtctcagccaaagccattcaagaagcctgtgttatcttcaaagactatgaggttcta
gaaagtgtagcgtgtgtttcaccggctcggttcaaaccctgtgaagaagttcctgcgact
tgtagcggcagatttgagagaaagaactgtggctttaatgctgctggtgcgacgagggcg
catgtgtctggtaagcctcttctgaagccggaggctctgttcagtggcagcggtacgctc
ggcatgaacagtgctgtgaagacattaaaggatcatcagtgggacagtgatggtggcttc
aagaagccttgtactaaaccagccacagtctctgcagaaaccttgttatctgaaagggcc
ctggcacataatgtcaattcgttgcaaaggggttgtggattcagcactgcaagtgggaag
agagttgctgtgtctgatggagcccttcagaaggcaaaggccctgttgagtgaatttaat
gaggacggaactgaaaagaaagaagcgagaataagtcataccagtccaacaaagactctg
acagagaaccttggagggtttaagacggccagtggaaaaggagtagcattgtcagcgaag
gcccttgaacacaccaaggatttcttcaaggactttgatgctaacacagatgcctctaaa
cttgcagatacaaatgagaagtctgttgaaaaaaggaatactcacatgaatgcagggaaa
agtaattgtggtttcacaacagctgggggcaagaaggtgcatgtctctgaaaagagcctg
ttgaggacaaaagccctcctgatggaatcccctagaaaagattgtggtgatattaacttg
actaaacctgcttgtagggaaagggcctcaggatcagccggagaccacacacatccatca
cccagtgacaatgatgctgatgcaaaccaactacccaacactgtgtcggattctctcgat
gagttaggaaagggtttttcttttagcactgccagtggaacaacaatatgtgtgtcagac
acttccctcctaaaagccaagtctcttctcaatgaatgtgaaagggatgttgcgactagt
gacagattggattcagcaaatactttgtcacttaaattgcctcaaaagcctctttgcaac
acagccaatgggaaggcagtgcctgtttctgagaaggcccttcaggaggttaagtctgtt
tcctgggagaccagtcacattaaatatgacacaatagctcaaagtcctgcagaatgttca
tttggattcagcacagctagtggtaaaggggtgcatgtgtctgaaaaagcacttaaagcc
gcttttgacaaattcagagaaactgaaaacaatattgtacaatgcgagcctattagtgaa
aaaagcgattacaaaacactactgccagctcatgaccagctcgagccagtgacggcgagg
aaaccagagaatcgtgacacggtcctgaccagggatggaagagaacacggagagggttct
tccttgttgaacctggaatctctggggtttagtggctgcacagacacccagcaggagtat
tttgctcaggaggccatggacagcaccaaggctctgttagaggatgaacacctgtcgggc
cagagctctagatcttttgcttttcacaaaaaccctttagagaagaatcctgcctgcagc
gagcaagctgaatatagaagcagagcaactggaaaaaggacaggagaggatgctgatgta
aaagaacagccacccttgaaaagacgactcttggctgagtttgacagaactctggattgt
aacaagcggtcaatcacaccagtcaaaagttgctcagatgggatgctgaaagacaggaga
gtgtttaaatataatgtctctcttcaaccgaatatcacaagaccattcagggatccaaag
agccatgttggcttgactttgaataaggctgagtcacagaacaggaggccagagccaacg
ccagcagacatcaagccctccactgccaggggagctgtctttgttcctccgtttcgtaaa
aatatcaagacagagacacacaggagcaattttcaacaggataaaggtggaacacctgtc
gtgctggttccccagtttggaaaaccaacaagtaggaaaactgataaagacccgcaacct
ccaaacaataacacaacccaccacctcttcaaaatactggctaagaccagtgaaccatcg
cctgcactggaaaccaaagacaaccaaagccctgaaatggaaactaattatagtgacaag
gtaaacaaaatgaaaatagacccacaaagccatgagaagataaaccaacccagtggtgat
gacgaacaagatgtctcttatactgcacgacaggacaccatcacggagggctccacttca
gaccaggcttcccctggtagccacgaagtggatctccagagtttgcagctcgctctggac
atgcagatcatgaggctgaggaagaagaagcgtcagaacatccgtccggtaccagggagc
ctgttcctggccaagacctcgggggtcccccgggtggctctgagggaggccgtcagaggg
aggtgtcctgtccagcacacccagaaacagctgtatggatacggagtgcatcagcaggtg
cgtcagatcagcagcgagaatgccgagccgttttgttttcactgccaacactttttcaaa
cgagaggcgttggcagccggagttcagcttgctgatgggggctggctcatccccaggaag
gatggcagggctgggaaagtggagttctacagagcgctgtgcgacagcccaggtgtggac
ccccagctgatcagcgaggcgtgggtgtataaccactatcgctggatagtctggaagcag
gcggccatggagagatgtttcccggaggtgatggggggtctctgtctgaccccagagcag
gtgctcctgcagcttaaatacagatacgatgttgaagtggaccacagtcgacgaccggct
ctgaggaagatcatggagagagacgacacagtcgccaaaaccctggttctctgtgtgtgt
ggtgttgtgtccaggggacagaaccgcccgagccgggctgaagccagctccccccaggtg
gccggcagcaaggccgacccacgctttggggtcatatggctgacagatgggtggtatgcc
atcaaggcccagatggacgccccgttgacggccatgctggccaagggtcgccttgtcgtg
gggggtaagctggtgatccagggagcccagctggtgggaccccagacggcctgctcccct
ctagaggctcccgagtccctcatgttgaagatttgggccaatggcaccagaccagccaga
tgggatgcgaagctagggtttctgtgtgacccccgacccttgctcttccccctctcgtcc
ctgtatggcgatggaggtcctgtgggctgcgtggacttggtggtgctgagaagctaccct
gtgcagtggatggagaggaaaccagatggaggctttgtgttccgtactggacgcgccgag
gagaaggaggcccgtcgccacagcgacggcaagcacaaagctatggaggtcctcttcgcc
aaggtccaggctcagtttgagaaggaggacaatggtaagaaaacccgaggccgaagagga
tcgttgcgtcgtcaggacattgaggatctgcaggatggagaggagctgcatgaagcagtg
cagaacgacccagcatacctagaggcctctctcagtgagcagcagagaaaggtcctgacc
tcctacaggagctccctgggggagaggaggcaggcccagcttcaggagagcttccgcagg
gccctggaggctgatggcggacacggtcctaacagggaggtcacaccagtatggaagctc
tgcgtggcagactccagagaccagcggggcactagtgtctgcatgctgagtatatggcgt
ccttccatggacctccagtctttcctgagggagggttgtcgataccgggcccaccacctc
tctacatctgaaggcaggaagcgatctggcggaggttcagttcagctaactaccacaaag
agaacacagttccaaggcatgcaggcctcccaggactggctggcagggaattaccatgct
agagtggcagtcagctttcacgatctccgtaatcctgaattccagccattctgtggagag
gtggatattgttggatatgtcatctccatcacttccagtcaaggtttttctcaagtagta
tacatggtagatgggaagctggactttgtgaaggtacactcctacagtagcttggttcag
ctgggtttggaggatcttgtgaagcctcgggccctcctggctgtgagcaacctgcagctg
aggacactgtccagccccatccctggcctgcacgccagcgacctggccctcttcacctcc
aaccctaaggactcccatctacaggaggcattcacacagcttagggcactggtccagggc
caggagctcttcttcctgagtgcagaggagaggctgtcgaacttgatcccatctgatccc
agctccttctcctccccagctctgcagcctagaactccagcctggaagacacaagatgga
gggatacataaaacccctcagcagccaatcagaggctttggatccatgactcccatcaac
agtagccttccaccaccaatcagctcatcaggaaaactagacccaaagagtctgaagaga
aagaggggactggactctctgtgtcgcattccctctccccctccaatatatcccttgggc
accatgaccaccccatgtgttaacaagacattcaacccccccaggaggtctgacacccca
gcccagaccccagctcccagaccagccccaccagaagtggaggatgagtgggtcaacgat
gaagagttggctatgatagacacacaggctttatatagtgggcttggagaagaggtcaca
aggtga
DBGET
integrated database retrieval system