Osmerus eperlanus (European smelt): 134029368 Help Entry 134029368         CDS       T10927                                  Name (RefSeq) protocadherin Fat 4   KO K16669   protocadherin Fat 4 Organism oep  Osmerus eperlanus (European smelt) Brite Cell adhesion molecules [BR:oep04515]  Cadherins   Cadherin related    134029368 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Cadherin Laminin_G_2 Laminin_G_1 EGF Cadherin_4 Ig_Shg EGF_2 DUF3313 hEGF Motif Other DBs NCBI-GeneID:  134029368 NCBI-ProteinID:  XP_062329447 LinkDB All DBs Position 11:12901232..12912224 Genome browser AA seq 2889 aa AA seqDB search MPDTSLQDTRQKWSSNGTMQPNALSRPWYAIAGTVVGNVKAVHHERFTPFLYSVLEDDGE GLFLVSPHSGEFLLSRALDYEAQRHYVLTVTVQSGDLDVSSVRVYFNVVDVNDNPPVFRE AIYSVSLPEDTTVGTCFLALNVSDKDDGINGETDVEVTTGDKQGTFLVNPDGVLCLNSEL DRERRSTYNLTIQARDRAQPPTTCHTSTALVHVQVDDVNDNAPHFVSGKSVNIPEDTPPH TVVMVIQAVDSDIGSNGDVFYTLVDSAGGVFSISSTSGSLYLQESLDREQVDTLAITLAA TDKGSPQLTTFLNLTVHVEDTNDHDPAFTQSSYFLTVGEDASWGTNLLQVKAQDPDQGSN GEVRYQLNQGGPFVVDSFRGVVSVMDRLDRESESSYMLFVIAMDQGVPPRSARAVVNVTL LDVNDFTPLFAPATLTLHVLENGGDPSQLIHQIQAVDEDLEENSLPPLTGTATVHVIVDD MNDNKPVFSDVFTTIVPEDAPLGTVFAMITASDWDDGVYGLIRYSVDEENRFFSIDESSG ELFTTGVLDREAVAFYRLTVIARDTHPTHPLSSSTLVTVLIGDVNDHWPQFLYSPYVANM PADSAPVQAVDGDSGINAQLQFSLYGINADQFTIHPLSGAVFTSNSLTATEDITVNVHVE DGGEHPKFDTTTITIRLRNTSDFPVVNVDADRLFLSEDEPAGTVITVASAESSRRGPVSL YLISGNLDNAFQLHPSNGELTLKNPLDYETTKDYVLLVEGRDSGSPPFSSYAEIHINISD CNDNVPEFTQREYRCEVFENAPPTWLCDVLAIDVDSGSYGSVLYSIIDGNTDGAFTIDSE NGILSTTVSLDRESVPEYNLTIESVDQDNILYKDIAFVLIVVLDTNDHAPRFSQIFFTTI SEDAPIGYTAMQIISTDEDVGPNAVITYSIINQSDDIPFQIDVTSGCIKVEQYLDRETQD HYVLQVNANDSAWSISTDVSIDITDINDNRPVFSQSLYSVTLAETKDWDVFVVQVVATDE DTAPNSYILYFIEPASEEFWVNATTGGIYTKQPMSLQHSANIFIFTVLADDCGGVPPHSN TTVVVTFVPYNHFPPVFLPLTPLLVIPFDVVVGTELVQLSTMDLDMYPSNMSVKFSSAGG NASEFFVVQSDSGMTEIHFEITGKNLFAPQFLESHDTFSVPENLPVGSVIGKVHAIDKDD GVNGIVTYSIISGPKDVPFSIGQHSGLITLVQGVDYEKKTMYYLHISARDGGWRPENGTI SITVNITDVNDNPPVFTASEYLASVPENSAVGTLVFQMEARDADSGTNAYITYSLVAGNT DKFAVNPKKGTITTLDMFDFEMEQSFDLTVKASNTGGRHLFSLAHVTILVSGINEFIPVF LRNELNFTVSDSVPVGTTVGRVTATDSDQGFDGKVFYLLFGQSKKTGFDADEQTGEIYTT QDLRKLGFNHAGLRILAKNYGVITGVDIDEAFIQINIIDTNDPPEFTFTVSTAEVSEDTI VGTSIMTVSALDQDAILEWNTFSYSIISGNANSSFSVDPFSGVITVHSPLDRELWPVYNL TIAAIDYGSPPATGTANVVLDIGDINDNAPRVAFTEASVRENQPHGTIVATLNTSDADLA PNQGPFTYWLAQPSLDNSFSLTSDGVLFTTRPVDRELTPEFYVVVAVRDSGTPPLSSTTT LQVKILDENDNPSVPRNVYIEVKYYGSSFSGGLIGHVQPEDQDETSVYNCSIRNGHLNMF SIPFSTCELWSSPYKGEATYNITIEASDELHPPVNNSVYVNYKGFTNASMISSILFYVSS SSVEEFLSHKYLKFVKALDSLFNLQASKTHVFGMKLVGNEILLLAAVKSYNGQYLSAEVA SGISALHRKLLESQSNVTILRITSDPCLFNPCQNGGTCNKDIHISQDVALLESSALAFVS PQMEIFNCSCLAGFTGPLCESDMYECDGTSCDNEGTSSHVGECLKVNCQNGGSCFNRPEG FHCYCKDGYEGKLCERSVDNCASSPCSEGTCINSVTGYSCNCPFGVSGTRCQEHSLGFEE LSFMEFPPLDPHNNIILLELASVQQDSLLLVNPGSPLSVEFLALELLGGRARFSYNLGSG LVRLETKKQVADGHFHSITARRIGNIGSLEVDSCSDIEANGFCFSQNEGISSQRTLDGAS NMSLGGVRSIESILQIPTHIQSHDFVGCLRNVKVNGIPLVPSKALATYNILQSCPRDAVS PCDSSPCKNGGACQDMWSHYLCYCRNSYTGASCATVVSEEHVLRLNGNGYIAYGIRESYR RNVQLRDLLNTHSTKEKIRRVFSEIEVKIKTINNDGVLVFVLGRIRHTVLRIVDGQLQYI SIDSRSGHLSEVTVNPPVADGIWHVLHLYREGHNTIITIDEQLSMNTTNGTLDLTPVNVE KMVLGAVPPGTARELQPGFSGCVAYFRVTGYILPVGGTSEMVEAWPSSTLTQPTCVSQAS CVPSHCTDTNSASMRPCLSVSCETGRDCGELVRSNMSCICLHNASAVECDVCPSLLQSRH GCFSELQQSKPLWILAVVVPVTCLLLLLCLFITLRRQKASSGCQESCHGDSPLRREQGAE NQAFSHSDNTLVKDVSGPPDVIGADSQRLGVGCYSEACLQSLQSGVLEYYEIDSNYSHSD MASLRLSWHGHTHNTHCDRTEPRWTGFCQPVLSGPLPSQESRDKPLDMWQKSQLNLNLYV PQNTRQDVDGDGLLNLLDCESGEVEKLHFFERFPEFMSPPLGLSVEEVRRLNSPLEEMKP NKSGQPKDIHAPGTSARVTDSLSDTVTHGSFTVSEFESETEFLPSSSKGIVCEWTYSSRE PDIFPVHDTFQSNALSRTEAVCGGVQQWETLLNMSLQFETYAHVFEDIAGLPFELKHDCN MQSDQEEII NT seq 8670 nt NT seq  +upstreamnt  +downstreamnt atgcctgacacaagcctgcaagatactcgccagaagtggtccagtaatggtaccatgcag ccgaatgctctgtctcggccctggtatgctatagcaggaactgtggtgggaaacgtaaag gcagtacaccatgagagattcactcccttcctctactctgtgctagaggacgacggggaa ggcctctttctcgtcagcccacactctggggagttcttactgtcccgtgcccttgactat gaagcacagagacactatgtcctcacagtcactgtgcagtcaggggacctggatgtctcc agtgtcagggtgtacttcaatgtggtggatgttaatgacaaccctcctgtcttcagagag gccatctattctgtctcattgcctgaggacacaactgtgggaacttgcttccttgccctc aatgtgtctgataaagatgatggtataaatggagagacagatgtggaggttactaccgga gacaaacagggcacattccttgtgaaccctgatggtgtcttatgtctgaattcagagtta gatagagagaggagatcaacctataatctaacaatccaagccagagaccgtgcccagcct ccaactacatgtcacaccagcacagcacttgttcatgttcaggtagatgatgtgaatgac aacgctccacactttgtgtcaggcaagagtgtcaatatccctgaagatactccacctcat acagttgtaatggtcattcaagctgtggattcggacataggatccaatggggatgttttt tacactttagtggactctgctggtggtgtgttcagcatcagcagcaccagtggaagtctg tacctacaggagtctttagaccgagaacaggttgataccctggccatcacgttggcagct acagataaaggatcaccccagttgaccaccttcttgaacctcaccgtgcatgttgaggat actaatgaccatgacccagcgtttacccagagctcctatttcctgacggtaggggaggat gcttcctggggaaccaacctgctgcaggtcaaggctcaggacccagaccaggggtcaaat ggagaggtccgctatcagctgaaccagggtggaccgtttgtggtggactcctttcgaggt gttgtgtctgtgatggacagactagacagggaatcagaatcctcttacatgctattcgta atagccatggaccagggtgtgcctcccaggtcagccagggctgtagtgaatgtcactcta ctggatgtaaatgacttcacccctctcttcgctccagcaacactgactcttcatgtgctg gagaatggaggggatccctcccagctcattcatcagatacaagctgtggacgaggacctg gaggaaaacagcttgccacctttaacagggacagccactgtgcatgtcattgtggatgat atgaacgacaacaagcctgtgttttcagacgtattcaccactatagtgcccgaggatgcc cctctgggtactgtgtttgccatgatcacagcctcggactgggatgatggagtctatgga ctaataaggtattctgtagatgaagagaacagattcttctccattgatgagagttctgga gagctgttcaccactggtgtgctggacagggaagccgtggccttttacagactgaccgtg attgccagggacacacaccccacgcatcctctgtccagctcaacgctggtcactgtgctc atcggagatgtgaatgaccactggcctcagttcctctacagcccatatgtggcaaacatg cctgcagactccgctccagtgcaagcagtagacggagactcagggataaatgcccagctg cagttttcgttgtatggcataaatgctgatcagttcaccatccatccactcagtggtgct gtgttcacgtcaaacagcttaacagcaactgaagacatcacagtcaatgtccatgtggaa gacgggggagaacatcccaagtttgataccacaactataaccatcaggttacggaacacg tctgacttccctgtggtgaacgtggatgctgatcgactttttctctctgaggatgagcct gcggggacagttattactgtggcgtcagcagaaagttccagaaggggcccagtatccctc tacctcatctctggaaaccttgacaatgcgtttcagctccacccctcaaatggcgagcta acactgaagaacccgttggattacgagaccaccaaggattacgtgctcctggtagaaggc agagattcaggctcgccaccgttctcctcatacgcagagatacacataaacatcagtgac tgtaacgacaatgtccctgagttcacccagagagagtacaggtgtgaggtgtttgaaaac gctccaccaacatggctctgcgatgtcctggccattgacgttgactctggaagttacggg tcagtgctgtacagcatcattgatgggaacactgatggagctttcactatagattcagaa aatggcatactaagcacaacagtgagtttagacagagagtcagttcctgaatataatctg acaattgaatctgtagatcaagataacattctttataaagatatcgcctttgtgctaatt gttgttttggacacaaatgaccacgcgccacgattttctcagattttctttactacgata tctgaagatgccccaattgggtacaccgccatgcagataatctcaacggatgaggacgtt ggtcccaatgcagtgattacctactcaataatcaaccaaagtgatgacatcccttttcaa attgatgtaaccagtggctgtataaaggttgagcagtatttagaccgagagacgcaggat cactatgttctacaggtcaatgcaaacgattcagcttggagtatcagtacagacgtttcc atcgacataacagacatcaatgacaacagacctgtgttttctcaaagtctttactctgtt actctcgctgagaccaaagactgggacgtgtttgtcgtgcaagtcgtcgccacagacgaa gacacagcacccaatagttacatattgtacttcattgaaccagctagtgaggagttctgg gtgaatgcaaccacaggagggatttataccaaacaaccaatgtctttacagcactccgca aacattttcatctttactgtgttagcagatgactgtggcggcgttcctccccatagcaac accactgtggtggtgacctttgttccctataatcacttcccccccgtgttcctgcctctt acacctttgctcgtcataccctttgatgtggtcgtaggcacagagctggtccagctgtca acaatggatctggatatgtatcccagtaacatgtctgtcaagttcagctcagctggagga aacgcttcggagttctttgtggttcagtctgacagcgggatgactgaaattcattttgaa atcactggcaagaatctatttgccccacagtttctggagtcacatgacaccttttctgtc ccagagaacttaccagtgggttcagtcattgggaaagtccatgccattgataaagatgat ggagttaacggtattgtcacatattctatcatctctgggcctaaagatgtacctttctca atagggcaacattctgggctgatcactttggtacagggggtcgactatgaaaagaagaca atgtattatcttcatatcagtgccagggatgggggatggagacctgaaaatggaacaata agcattacagtgaacatcactgatgtcaacgacaaccctcctgtcttcactgcctcagaa tacctggcttctgttccagagaactcagctgtaggaaccctggttttccagatggaggct agagatgcagattcaggaacaaacgcatacataacctattcactcgttgccggcaacact gataagtttgctgtcaaccccaagaagggaacaatcactaccctagacatgtttgatttt gaaatggagcagtcatttgatctaacagtcaaagcttctaacacaggagggcgccattta ttcagccttgcacatgttaccatcctggtctcggggatcaatgagttcatacctgtattc ctgagaaatgagttgaacttcacagtgtcagacagtgtgcctgtcggaaccacagtagga agggtcacagccacagattccgaccaaggctttgatggaaaagtattttacttgcttttt ggtcaaagtaaaaagactggctttgatgctgatgaacaaactggagaaatatacaccact caagatctgagaaagttaggcttcaaccatgcaggtctaagaattctggcaaagaactat ggtgtcataactggtgtggacatagatgaggcctttattcagattaacattatagataca aatgaccctccagaatttaccttcacagtctccacagcagaggttagtgaggacaccata gtgggcacctccattatgacagtgagcgccctggaccaggatgccatcctggagtggaat actttctcctacagcattataagtggaaacgcaaactcctctttctctgtcgatcccttc agtggggtaatcactgtccactcacctctggatagagaactgtggcctgtgtataacctg accattgcagccatagactatggctctcctcccgccactgggactgctaatgtagttctg gatatcggtgacatcaatgataacgcacctagggtagcattcacagaggccagtgttaga gagaaccagcctcatggtacaatagtagcaactctgaacacttctgatgctgacctagca cccaaccaaggaccttttacatactggctggcacagcctagcttagacaatagcttctca ctcacgtctgatggagttctcttcacaactaggcccgtggatcgagagctcacgcctgag ttttatgttgttgtagcggtcagagattcagggactcctccactatcctccactacaacg cttcaagtcaaaattctggatgaaaacgacaacccgtctgtgcccaggaatgtatatatc gaggtgaagtattacggaagctccttctcggggggcctgattggtcacgtccaaccagag gaccaggatgagactagtgtgtacaactgcagcatcagaaatggtcacctcaacatgttc tcgattcccttcagcacatgcgagctgtggtcttctccatacaaaggagaagctacatac aacatcaccattgaggccagtgacgagcttcaccctccagtcaacaacagtgtttatgtc aactataaaggattcacgaacgcctctatgattagcagtatattattctatgtatcctca agctcagttgaagagttcttgtctcacaagtatttgaagtttgtgaaagccttggacagt ctttttaacctgcaggcctctaaaactcatgtgtttggcatgaaacttgttggaaatgaa atcctcctgttggcagctgtgaaaagctacaatggccagtatctgagtgctgaggttgct agtggtatctctgctcttcacaggaaactgttagaatcccagagtaatgtcacaatatta cgcatcaccagcgacccttgtctgtttaacccctgtcaaaatgggggcacatgcaacaag gacattcacatcagccaggatgtggccctgctggagagctctgctctggccttcgtctca ccccagatggagatatttaactgttcctgtttagctggcttcactggacctctgtgtgaa tcagacatgtatgagtgtgatgggacttcttgtgataacgaaggcacatcctctcatgtg ggtgaatgcctgaaagtgaattgccaaaatggaggctcctgttttaacagaccagagggg ttccactgttactgtaaggatggctatgaaggaaaactttgtgagaggtctgtcgacaac tgtgcttcctctccttgtagcgagggcacctgcataaactctgtgacaggatactcttgt aattgtccttttggtgtaagtgggacccgctgccaggagcatagtttggggtttgaggag ttgtccttcatggagtttcctcctttagatcctcacaacaacatcatcttgttggagctg gccagtgtgcagcaagactctctgctgctggtcaaccctggcagccctctcagtgtagag ttcctggctctggagctactcgggggtagagcacggttctcctacaacctgggctcaggc ctagtgaggctggagaccaagaagcaggtggctgacggacattttcacagcatcactgcc aggcgtatcggcaatataggctctttggaagtggacagctgctcagacattgaagccaat ggattctgtttctcccaaaatgaaggcattagctcacaaaggactctggatggggccagt aacatgtcattgggtggagtcaggtctatagagtcaatactgcagatccctactcacatc cagtctcatgactttgttggatgcctcagaaatgtaaaagtgaacggaatacctctggtg ccctccaaggccctggcaacatataacatcctccagagctgtccacgagatgccgtttcc ccctgtgacagcagtccctgtaagaatggaggtgcttgtcaagacatgtggtctcactac ctctgttactgtagaaacagctacactggagccagttgtgccacagtcgtttcagaagag catgttttgcgactgaatggaaatggctacatcgcgtatggtattcgggagagttacagg agaaatgttcagctaagagacctgctaaacacacacagtacgaaggaaaaaatccgacga gtcttttcagagattgaagtcaagatcaagactattaataatgatggagtgttggtgttt gtacttggaagaatacgacataccgtgctaaggatagtggatggacagctccagtacata tccatagacagcaggtcaggacacctgtcagaggtcactgtaaaccctcctgtggcagat gggatttggcatgtccttcacctgtacagagaaggacacaacaccatcatcaccattgat gaacagctgtctatgaacaccaccaatggaacacttgacctgactcctgtcaatgtggag aagatggtgctgggggcagttccacccgggactgcaagagagctgcagccagggttttct ggatgtgtggcatacttccgagtcactggctacattttacctgtcggtggaaccagcgag atggtggaggcctggcccagttcaactttgacccagcccacttgtgtgtctcaggccagc tgtgttccctcacactgtacggacacaaatagcgctagcatgaggccttgcctttcagtg tcgtgtgagacaggtagagactgcggggagcttgtaaggagcaacatgtcctgcatctgt ttacacaatgccagcgctgtggagtgtgatgtctgcccttcgctgctccagagccgtcat ggctgtttttctgagctccagcagagcaagcctctgtggatcctagccgtggttgtccct gtgacctgcctcctgctcctcttgtgcctcttcatcaccctgaggcggcagaaagccagc agtgggtgtcaggagagctgccatggcgacagcccactaaggagagagcagggggcagag aaccaagcgttctctcacagtgacaacactcttgtgaaggatgtcagtggaccacctgat gttattggggctgacagtcagaggctgggtgtggggtgctatagtgaagcttgcctccaa agcctccagtctggtgttctggagtactacgagatagacagcaactacagccattcagac atggcgtctctcagactcagctggcatggacacacacacaacacacactgtgacaggaca gagccaagatggacagggttctgtcaaccagtcctatcaggacccctgccaagccaagag agcagggacaaaccactggacatgtggcaaaaatcacagctaaatttgaatctttatgtc ccccaaaatacaagacaagatgtggacggggatgggctgctgaaccttctagattgtgag tctggagaggtggaaaagcttcactttttcgaaaggttcccagagttcatgtcaccccct ctgggactgtcagtggaggaagtcaggaggctgaactctcctctggaggaaatgaaacct aacaagtcaggtcaaccgaaggatatacatgctccaggaacgtctgccagagtgacggac agcctctctgataccgtcacacatggctccttcacagtctcagagttcgagtctgaaact gagtttcttcccagtagttctaagggtattgtgtgtgaatggacatacagctccagagag cctgacatatttcctgttcatgacaccttccaatcaaatgctcttagcaggacagaggct gtatgtgggggtgttcaacagtgggaaaccctactgaacatgagcctgcagtttgagacc tatgctcacgtgtttgaggacattgcaggtttgccttttgaactaaagcatgattgtaac atgcagagtgaccaggaagaaatcatatga

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