Osmerus eperlanus (European smelt): 134029411
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Entry
134029411 CDS
T10927
Symbol
sb:cb81
Name
(RefSeq) mRNA decay activator protein ZFP36L1-like
KO
K18753
butyrate response factor
Organism
oep Osmerus eperlanus (European smelt)
Pathway
oep04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
oep00001
]
09140 Cellular Processes
09143 Cell growth and death
04218 Cellular senescence
134029411 (sb:cb81)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oep03019
]
134029411 (sb:cb81)
Messenger RNA biogenesis [BR:
oep03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
134029411 (sb:cb81)
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Gene cluster
GFIT
Motif
Pfam:
zf-CCCH
zf_CCCH_4
zf-CCCH_4
zf-CCCH_2
zf-CCCH_9
Torus
Motif
Other DBs
NCBI-GeneID:
134029411
NCBI-ProteinID:
XP_062329491
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Position
11:complement(5913610..5916922)
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AA seq
430 aa
AA seq
DB search
MPSNFLTPFLELDEEFCKNFHGLDMTDGLPVNTQRQRVVGFQRRHSLCPVTLPNSKFNNG
SVEPVAEPIGWPLSSGNQPWSREFQQQLPRSSLNHIPFRVDRSVSMIEGNVGSLGSREHQ
LPTPPPLMPPPGLSLSTGFLSTSKCLTPAPTPPLSTRYKTELCRTYEESGTCKYGSKCQF
AHGMDEVRGLSRHPKYKTEPCRTFHTIGFCPYGSRCHFVHNNEEQDSPPGTQHPWARERP
QLLRQSISFAGFSSSSSSSSSSPAFRPQLLTGFQPLQDPMLFSRASSVSPPPSTGSPELL
SPLLPEPAAFRQAYPFSSDLGGDQPGTPRFYALTDSLSSSKCQAVCGGPVVQVAQKCHIQ
LQNHQNHQNHQSQRQAFSFPALPVLHRCSSAESLTDLEGYSSSSSLSGSESPSFEGRRLP
IFSRLSVSDD
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
atgccttccaatttcctgaccccttttctggagctggacgaggagttttgcaagaatttc
cacggtctggacatgacagatggccttccagtcaacacgcagagacagcgcgtcgtgggt
ttccagcgcaggcactcgctgtgtccggtgactctccccaactccaagttcaacaacggc
agcgtggagcccgttgctgagcccattggctggcctctcagctccggaaaccaaccgtgg
agccgggagttccagcaacagctgccgcgttcgtctctcaaccacattccgttccgcgtg
gaccgttctgtcagtatgatcgagggcaacgtcggcagcctgggctcgcgcgaacaccag
ctccccacccccccgcccctgatgcccccgccaggcctgagcctcagcactggctttctg
tccacctccaagtgcctgacccccgcccccacccctccgctctccacgcgctacaagact
gaactgtgccgcacgtatgaggagagcgggacctgcaagtacggctccaagtgccagttc
gcccacggcatggacgaggtgcgcggcctgagccgccaccccaagtacaagacagagccg
tgccgcaccttccacaccatcggcttctgcccctacggctcccgctgccactttgtccac
aacaacgaggagcaggactctcccccgggtacccagcacccctgggccagagagcgcccc
cagctgctccgccagagcatcagctttgccggcttctcttcctcctcttcctcctcctcc
tcctctccggccttccgtccgcagctgctgactgggttccagcccctccaggaccccatg
ctgttctcccgggcctcctccgtgtccccccctccatccacagggagccctgagctcctc
tcccccctcctgcctgagccggcggccttcagacaggcctaccctttctcctcggacctg
gggggggaccagccgggcacgccacgcttctacgccctcactgactccttgtcctcctca
aagtgccaggccgtgtgtggggggccggtggtccaggtggcccagaagtgtcatattcag
ctccagaaccaccagaaccatcagaaccaccagagccagcgccaggccttctccttcccg
gccctgcccgtgctccaccgctgctcctcggccgagtccctcaccgacctggagggctac
agcagttccagcagcctcagcggatccgagtcgcccagcttcgagggacgacgcctgccc
atcttcagccgcctgtccgtctcggacgactga
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