Osmerus eperlanus (European smelt): 134029488
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Entry
134029488 CDS
T10927
Symbol
nectin1b
Name
(RefSeq) nectin cell adhesion molecule 1b isoform X1
KO
K06081
poliovirus receptor-related protein 1
Organism
oep Osmerus eperlanus (European smelt)
Pathway
oep03266
Virion - Herpesvirus
oep04514
Cell adhesion molecule (CAM) interaction
oep04517
IgSF CAM signaling
oep04520
Adherens junction
oep05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
oep00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03266 Virion - Herpesvirus
134029488 (nectin1b)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
134029488 (nectin1b)
04517 IgSF CAM signaling
134029488 (nectin1b)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
134029488 (nectin1b)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
134029488 (nectin1b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
oep04515
]
134029488 (nectin1b)
04090 CD molecules [BR:
oep04090
]
134029488 (nectin1b)
Cell adhesion molecules [BR:
oep04515
]
Immunoglobulin superfamily
Nectin family
134029488 (nectin1b)
CD molecules [BR:
oep04090
]
Proteins
134029488 (nectin1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
C2-set_2
Ig_3
Ig_2
V-set
I-set
ig
Ig_PVRIG
Glyoxalase_3
Insulin_TMD
Motif
Other DBs
NCBI-GeneID:
134029488
NCBI-ProteinID:
XP_062329581
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All DBs
Position
11:complement(11831335..11931162)
Genome browser
AA seq
523 aa
AA seq
DB search
MAMSTTLWILLLAFNIQEGNGQMVQMDSIKSGFVGSQVELRCIFVNSNPPVKISQVTWQK
FLNGTKQNVAIANPALGVSVLPPFKERVSFKQAAVRHRTPSLEDTTIVFSSLRLSDEAAY
ICEYTTFPAGNRENMVNLTVFARPVTRMTLTTPTIVARAQKRKMTVATCLSANGKPPSVI
KWETRLKGEATFQETRNPNGTVTVRSNYVVVPSRETHKQKLTCIVTYRSERITDSVVLNV
QYEPEVKIEGFDGNWYLNRQDVQLTCNADANPPVTVYQWKLLNGSLPNTVEIKNNSLFFK
GPVTYDLAGTYVCDATNGIGTRTGSVEVNITEKPMARGPPGGVIGILGGVVAAGLIIGVA
VTVFLVYRRQQKTRTETDNDLTDLPPAHKPAPPPPKKKNSDMKGHLTSDDIQVVHLDKDE
EMQKLPLQPPYYDMAPSESTPFTDKPNCGGRHEELSNPAEYVSCHRVFNEGHCPESQAAQ
AYPPVTFLPQNPYKQHPSNDPMYTNVPPHSPRPTFTFPKEQSV
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atggcgatgtctacaactctttggatactcctactggcttttaacatccaagagggcaat
gggcagatggtacagatggactccattaagtcaggcttcgtcggctctcaggtggagctg
cgctgcatcttcgtcaacagtaacccgccggtgaagatctcccaggtcacctggcagaaa
ttcctcaacggcaccaagcagaacgtggccattgccaaccctgccctgggagtgtctgtc
ctgccgcctttcaaggagcgggtcagctttaaacaggccgccgtgcgacaccgcacaccc
tctctggaggacaccaccatcgtgttcagcagcctgcggctgtctgacgaggctgcatac
atctgcgagtatactaccttccctgctggcaaccgcgagaacatggtcaacctcactgtg
ttcgctcgacctgtgacacgtatgacactgaccacgcctaccatcgtggcccgagcccag
aagcgaaagatgacagtggccacctgtctgtcagccaatggcaaacctccgagtgtgatc
aagtgggagacgaggttgaagggagaagccaccttccaggagacccggaaccctaacggc
accgtgacggtgcgaagcaactatgtggtggtgcccagccgtgagacccacaagcagaaa
ctcacctgcatcgtcacttaccgcagcgagaggatcacagacagcgtggtgctgaacgtg
cagtatgaaccagaggtgaagattgagggctttgacgggaactggtacctgaaccgccag
gatgtccagctgacctgcaacgctgatgccaacccacccgttaccgtgtaccagtggaaa
cttttgaatggctccttgcccaacactgttgagatcaagaacaactccctatttttcaaa
gggcctgtgacctatgacctggctggcacgtatgtctgtgacgccaccaatggcattggg
acccgtactggcagcgtggaagtcaacatcacagagaagcctatggcacggggtccccca
ggcggcgtcattggaatcctgggaggtgtagttgccgcaggactcatcattggagtggct
gttacagttttcttggtctaccgacgacagcagaagaccaggaccgagacagataatgac
ctgaccgacctcccgccagcccacaagccggcccctcccccacccaaaaagaagaacagt
gacatgaagggccatttaacatctgatgacatccaggtggttcatctggacaaggatgag
gaaatgcagaagcttcctcttcagcctccttattacgacatggcgccctctgagtccacc
cccttcactgataagccgaactgtggggggcgccacgaagaactatcaaacccggctgaa
tatgtgagctgtcatcgcgtcttcaacgagggacattgtccagagtcgcaggccgctcag
gcctaccctcctgttactttcttaccccaaaacccttacaagcagcatccatccaatgac
ccaatgtacaccaacgtcccacctcactctcctcgccccacctttacattccccaaggag
cagtctgtgtga
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