Osmerus eperlanus (European smelt): 134029614
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Entry
134029614 CDS
T10927
Name
(RefSeq) arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 1-like isoform X1
KO
K18439
Arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 1
Organism
oep Osmerus eperlanus (European smelt)
Pathway
oep04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
oep00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
134029614
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oep04131
]
134029614
Membrane trafficking [BR:
oep04131
]
Endocytosis
Arf GTPases and associated proteins
Arf associated proteins
134029614
Endosome - Golgi transport
Arf GTPase associated proteins
134029614
Others
Rho GTPase associated proteins
Rho GTPase-activating proteins
134029614
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGAP
PH
ArfGap
RA
SAM_1
PH_11
SAM_2
PH_6
PH_8
PH_3
PH_9
Motif
Other DBs
NCBI-GeneID:
134029614
NCBI-ProteinID:
XP_062329835
LinkDB
All DBs
Position
11:4967054..4997679
Genome browser
AA seq
1613 aa
AA seq
DB search
MSNSEACVSVREWLSVLRLEQYYQAFQVAGLLTFKDCSALTPDLLERMDITLPGHQRRIL
ASLNKTLHTPPDTHTPQRQTHTHAPPERDLHAVPGEEGDHGEKERPAASRNQPSPKARER
IVPAPRQRHGRDKPVPKERPVSRTREQERDGDRERQGCRAETSGELKKPVPKERTKDHSV
HVDPNSPNAHPPLPDGPQDPPLPPIPPRSTPNCPPQRFTPTPTPTPPSPQLSSIPASIAL
PTRTLLHPSPDTPSLQTRPNSLALFLPPPQPKQRGKGRRKSPPISPSASTSSSSSLISSS
SSSFSSSSLEQSEDRGAPPLPPKSSAAGAGPNGPPPIPRRTPVRPNESTPQSDSPVGETP
EGPTPRVPPRSKTPCAADSAPLHARAASPLDVQSALPVRRVPEPSTPEIRSESIDSSEYY
EDVDPGYVPQSVNIVSREMFLPVPGQGKGRYNSLCSDDEQLDYDNEPITNNRNSWVDYGI
STLQGSVYLPSNGCLAPPPQEAPAHLSVIKMGWLDKNPPQGSLYYQRRWVKLDVDHLRYF
DNDKEVYSKRIISTSAITGVTNVGELKFEVVTHNRNFLFRAETELERKEWVSVLQDCVRG
RQTSSCSTPASPLTPEQQGYLELRGLRSKLYTVVSGEKVFLYKNMEDYRLGVGISSIEMN
VGNVKETDRRSFDLTTPYRIFSFIAESEQLKDQWVEAMRDSIGEALSNSEVAEQIWAEPS
NGYCADCGATKPEWASINLCVVVCKRCAGEHRGLGPSISKVRSLKMDRKVWTEELIQVFL
LLGNERVNGFWAANVPPSEALSPSSCTEERHRFIGNKYRHGKYRKYHPLYGNQRELNNAL
CINVQCSDVLETLSLLFCGADVNCSPDQADWPSPLSLAQAHAQTLQAEFLSRNLNTELPR
LEVIGLMEAVHYSAPSSVSCNGFLFKTGSMARPITERKAKEEFSRRWCTLNDGCFSYYES
DKNSTPNGMLKSTEIVCLASNTPDKHGYEHTFELYSDSERLYLFGTDDPESHREWVKSIT
KTFIPANAEPLLRLGFERIGRLRYKDGLNLQSPRVGWFALVGSSLHAYLEDGEGEEIHLR
KLQELSIQQENEVLVLVERGRTLYMEGERKLDFVGWCGAIQRAASSSGDSLGQQQLTETD
IPVLVDRCIDYITQCGLTSEGIYRKSGVNSRVAALCETFRQDARRVHLREGENQVDDVAT
TLKRFFREAEEGLFTSQDHQAWLSTPALQDDSVKISQYQLLLNRLPRVNKATLRALVNHL
YCVQRFAELNQMNLHNLAIVFGPTLFQTDGKDYTAGRVIEDLIQHYTQIFDVDEQQLKRQ
LDEITVIIKVRENLNAKVSASGSGDFICTVYLEEKKETAEQHVKIPGSMTAAELTCEILD
RRKITVREKDYWSCWEVSEKEETERPLHHLERVLPILHSLGTDSHLLIKKHVSMEAMLIY
LASKVDVSKHGMVKFREERSILGLGLSSGSFHDRYFILTTGSFRMYKEVRSNRPERDWNV
KNLKVYLGIKKKLRPPTCWGLTVVYEGDKLEKWYLCCDTQSEMREWYATFLSIQFEGNVW
PTDAVHLRVSRALPLDTRHGNVSLIPLRGSENEMRNSVAAFSQDPLALFRDVR
NT seq
4842 nt
NT seq
+upstream
nt +downstream
nt
atgtctaactcggaggcgtgtgtgtctgtgcgggagtggctgtctgtgttgcggttggag
cagtattaccaggccttccaggtggcgggcctgctaacattcaaggactgctctgccctg
acccctgaccttttggagaggatggacatcacgctgcccgggcaccagagacgcatactt
gctagccttaacaaaacactccacactccccctgacacacacactccgcaaaggcagaca
cacactcacgccccccccgagagggatctccacgccgttcctggggaagagggagatcat
ggagagaaagagagaccagcagcctccagaaaccagcccagccccaaggccagagagaga
atagtacctgcacctagacaaaggcatgggagagacaaaccggttcccaaagagagacca
gtgtcaagaacaagagagcaagagagggatggagacagagagagacaggggtgcagagcg
gagacgagtggagagttgaagaagcctgtccctaaggagaggactaaggatcactctgtt
catgtggaccctaactcccccaacgcgcaccctcccctcccagatggcccccaggacccc
cccctgccccccatcccaccacgaagcacccctaactgcccccctcaacgcttcaccccg
acccctacccccacgcccccctcacctcaactcagtagcattcctgcctcaatagccctc
ccaacccgcactctcttgcatccttcgcctgacaccccctccctccaaacgcgcccaaac
tctctggccctgttccttccccccccccagccaaaacagaggggtaaggggaggagaaaa
tccccccccatttccccctcagcctccacctcctcctcgtcctccctcatctcctcgtcc
tcgtcctccttctcctcttcctctctggagcagtctgaggacaggggagctccacccctc
cctcccaaaagctctgctgcaggggcgggcccaaatggaccaccaccaatcccacgccgg
accccagtccggcccaatgaaagcacacctcaaagcgactctcctgtcggtgagacgcct
gagggccccacgccgcgcgttccgccccgcagcaagacgccgtgcgcggcagacagcgcg
ccactccacgcccgggctgcgtcgccgttggacgtccagtcggctctgccagtgagaaga
gtccctgagccgtccacccctgagatcagatcagaatcaattgacagctctgaatactat
gaagatgtagatcctggatacgtaccccagtctgtcaacatagtgagcagggaaatgttc
ctgccggtgcctggacaagggaaggggcggtacaactccctctgcagtgatgatgagcaa
ctagattacgacaatgagccgatcacaaacaatcgtaactcgtgggtagactacggcatc
agcacccttcaggggagtgtctacctgcccagcaatggatgcctggccccgccccctcag
gaagcccccgcccacctaagtgtcatcaagatgggttggctggacaagaacccaccgcag
gggtctctctactaccagagacgttgggtgaaactggatgtggatcacctcagatacttt
gataatgacaaggaagtgtactccaagaggatcatctccacctctgccatcacaggggtc
accaacgtgggcgagctcaagtttgaggtggtcacgcacaaccgcaactttctcttcagg
gcagagacggagttggagaggaaggagtgggtgtcagtgttgcaggactgtgtccggggt
cgccagaccagctcttgctccacccctgcttcacctttgacccctgagcagcaaggctac
ctggagttgagaggacttcgctccaaactctacacggtggtgtctggggagaaggtcttc
ctttacaagaacatggaggactaccgtctaggtgttggcatcagctccattgagatgaac
gtaggaaacgtcaaagaaacagaccgtcgcagctttgaccttaccacaccctatcgcata
ttcagcttcatcgccgagtcggagcagctgaaggaccaatgggtggaggccatgcgggac
tccattggagaggcgctgtccaatagcgaggtggctgagcagatctgggcggagcctagc
aacggttactgtgccgactgcggagccaccaaacctgagtgggcgtccatcaacctgtgt
gtggtggtctgtaaacgctgtgcaggagagcaccgagggttaggccccagcatctccaag
gtccgcagtctgaagatggacaggaaggtgtggacagaggagctcatacaggtgttcctg
ttgctaggtaacgagcgtgtcaacgggttctgggcggcgaacgtcccgcccagcgaggcc
ctgagcccgtccagctgcaccgaggaacgccaccgcttcatcggcaacaagtaccgccac
ggaaagtaccggaagtaccaccccctctatggcaaccagagagagctcaacaacgcgctg
tgtattaacgtccagtgcagtgatgttctggagaccctgagtctgttgttctgtggggcg
gatgtgaactgctctccagaccaggccgactggccctcgcccctctccctcgcccaggcc
cacgctcagacactccaggctgagttcctcagccgcaacctcaacacagagctgcctcgg
ttggaggtgatcgggctgatggaggcggttcattactccgccccctcctccgtctcctgc
aatggcttcctgttcaagaccggctctatggctcggccaatcacggagcgcaaggctaag
gaggagttcagccgtcgctggtgcacactgaacgatggctgcttcagctactacgagagt
gacaagaactccacccccaacggcatgctgaagtccacggagatcgtctgtctcgccagc
aacacgcctgacaaacatgggtacgagcacacgtttgagctctactcggactcggagcgt
ttgtatctgtttggtacagacgacccagagagccacagggagtgggtcaagtccatcacc
aagacatttatcccagccaatgcagagcccttgctgaggctgggctttgagcggattggt
aggctgcggtataaggacgggctgaacctgcagagccctcgggttggctggtttgcgctg
gtcggctcgtcgctccacgcgtacctggaggacggcgagggagaggagatccacctccgc
aagctgcaggagctgtccatccagcaggaaaatgaggtgctggtgctggtggagagaggg
aggaccctgtacatggagggggagaggaagctggactttgtgggctggtgcggggccatc
cagagagcagctagcagcagcggagactctctcggccaacagcaactcactgagacggac
attcctgtcctggtcgaccgttgcatagactacatcacacaatgtggcctgacgtccgag
ggcatctaccgtaagagtggcgtgaactcgcgcgtggcggcgctgtgcgagacgttccgg
caggacgccaggagggtgcatctccgggagggggagaaccaggtggacgacgtggccacc
acgctcaaacgcttcttcagagaggccgaggagggcctgttcacctcccaggaccaccag
gcgtggctcagcacacctgccctccaggatgacagtgtaaagatctctcagtaccagcta
ctgctcaacaggctgcctcgggtcaacaaggccacactacgagcactggtcaaccacctg
tattgtgtgcaacggtttgcagagctgaatcagatgaatcttcataacctggccattgtg
tttgggcctacactgttccagacagatgggaaagactatactgccggccgtgtcatagaa
gacctcatacagcactacacacagatctttgatgttgacgagcagcagctaaagaggcag
ctggatgagatcacggtcatcatcaaggttcgagagaatctgaacgccaaggtctctgca
tctggctctggggacttcatctgcacggtgtacctggaggagaagaaggagaccgccgag
cagcatgtcaagatccctggctccatgacggcggctgagctgacctgtgagatcctggac
agacggaagatcacggtcagagagaaggactactggagctgctgggaagtcagcgagaag
gaggagactgaacgcccgctgcaccatctggagagagtgttgcctatcttacactctctg
ggcacagactctcatctgctgatcaagaaacacgtttccatggaggctatgctcatctac
ctggccagtaaagtggatgtgtccaaacatggaatggtaaagttccgggaggagaggagc
attctgggattgggcctaagctctggaagtttccatgaccgctacttcatcctcactact
ggttcctttaggatgtacaaggaagtgcggagtaaccgtccagagagggactggaatgtg
aagaatctgaaggtgtaccttggcattaagaagaaactgcgtccacccacctgctggggt
ttgacagtggtctacgagggggacaaactggagaagtggtatctctgctgtgacacccag
tcagagatgagagagtggtacgccaccttccttagtatccagtttgagggtaacgtatgg
cctactgatgcggtgcacctgcgtgtgtcccgggcgttgccattggatacgcgtcacggt
aatgtgtcgttgattccgttgcgaggcagcgaaaatgaaatgcggaacagcgtagcagct
ttcagccaagacccgcttgctctttttagagatgtgcgatga
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integrated database retrieval system
