Osmerus eperlanus (European smelt): 134030787
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Entry
134030787 CDS
T10927
Name
(RefSeq) integrin alpha-M-like isoform X1
KO
K06461
integrin alpha M
Organism
oep Osmerus eperlanus (European smelt)
Pathway
oep04145
Phagosome
oep04514
Cell adhesion molecule (CAM) interaction
oep04517
IgSF CAM signaling
oep04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
oep00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
134030787
04517 IgSF CAM signaling
134030787
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
134030787
09142 Cell motility
04810 Regulation of actin cytoskeleton
134030787
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oep04131
]
134030787
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
oep04147
]
134030787
04515 Cell adhesion molecules [BR:
oep04515
]
134030787
04090 CD molecules [BR:
oep04090
]
134030787
00536 Glycosaminoglycan binding proteins [BR:
oep00536
]
134030787
Membrane trafficking [BR:
oep04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
134030787
Exosome [BR:
oep04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
134030787
Cell adhesion molecules [BR:
oep04515
]
Integrins
Integrin alpha subunits
134030787
CD molecules [BR:
oep04090
]
Proteins
134030787
Glycosaminoglycan binding proteins [BR:
oep00536
]
Heparan sulfate / Heparin
Adhesion molecules of cell surface
134030787
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA
ITGAX-like_Ig_3
FG-GAP
Integrin_A_Ig_2
VWA_2
Integrin_A_Ig_1
FG-GAP_3
Motif
Other DBs
NCBI-GeneID:
134030787
NCBI-ProteinID:
XP_062330073
LinkDB
All DBs
Position
12:17704158..17724991
Genome browser
AA seq
1138 aa
AA seq
DB search
MAWTFSLLLFLAAVLQGCLAFNMESVAWKYLSRPAAGFGYQVVIRDSSSLLTSAPLEQDG
DRRGKVYRCSINSCSEISIPVPSHAVNMSLGLTMTKNPTSQTTMVCGPTIPRECDAITTY
NGLCLEINGRDSPGPPLPASLEECPGKTDIAFLLDGSASVNTIDFAKMKVFVKDLIRTLV
GKDTKFAVAQYSFTCTIHFNFRNFLPQIWERQIDMINQKGGGTNTASAIQKVVDEVFSVS
GGSSDGASKILIVITDGESQDGGNLPSATYAANIKSIVRFAIGVGSAFNKQSAKDELDTI
ASLPSQTHVFQVSSFEALNQISRTLQNSIFNIEGSQAAGASLEMEMAQEGFSAAYIPEGG
YHIGTVGAFQWKGGYQSYVKIDHQPTFQNMKGESDSYLGYSMSTARTRFGTFTVVGAPRA
AHRGQVMVVSPGRTDQTLQFTGQIGAYFGAVVCAMDVDGDSYSDLVLVSSPMYTQRDREG
MIFICTLTEKKGVSFPGGRENMLQGEAGERSRFGMSLAPLPDLNNDGFNDLAVGAPLEDD
GQGSVYIFHGQRGGINNLYSQRIAGSEVHSGMKFFGLSISQSSLDLSGDTLPDMAVGSKG
AVILLRSKPIVTVNVEVSFNPTRISTNHSDCVTPLPHTATVCFTMTPHTQGQTARAQVNY
TLTLDARRKAPNFRAYFQLKQRQDTNMVILDLKETCNKHNFFVEACPEDSLNLVHNEVSF
SFEGLPSSDSLSPSLLQGSTTTSNHPLDFEINCGSDNNCIDNLKVDFNFTGSSELRVGID
DVLSLTVSMESREENSYNSRVVLRYPAGLSYRHFTPVQGRVECNSLDSESEGTTGRSECT
INKPIFKTNSKAVFTISYGIDRNSQFDPRVNFSANATSGNVHAAGSDLFIHRDIRVQYSI
YVLLSRVEDSTSYINFTAEKNDLQKPVLQSFQVLNFARDFNLTVIIKVPMQLGETDIWVD
SRGMQIPGCKRGKDEEPTVRDFVDKLKRKSPLDCAVARCGVFTCSVFVRRDDSLVYSISG
NISSGWIQQIGLMSGQFSLTSTATLDYDRDQYIYDSQDSKNNPPIQKVETYVEVFPEVDL
TKEIVGGSLGGLVLLALISAALYKAGFFKSQYKQMLENSGDPEGADPEYENTVLEENN
NT seq
3417 nt
NT seq
+upstream
nt +downstream
nt
atggcatggacgttctccctcttactgttcttggcggcagtgctgcaaggctgtttggct
ttcaacatggagtctgtggcttggaagtaccttagcaggccggccgctgggtttggatac
caggtggtgattagagacagcagcagcctgctcaccagcgccccattagagcaggatgga
gacaggagaggaaaggtttacaggtgttcgatcaactcctgttctgagatatctatacca
gtgcccagtcacgcagtcaacatgtctctgggtttgacaatgacaaagaatccaacatcc
caaaccaccatggtatgtggcccaaccatccctcgagagtgtgatgccatcaccacctac
aacggcttgtgtttggagataaatggaagagactcccctggtcctcctctccctgcctcc
ctagaggaatgccctgggaagaccgacatcgctttccttttggacggttcagctagcgtc
aacaccatagactttgctaaaatgaaggtttttgtcaaagatctgatccgtacactagtt
gggaaggataccaagtttgctgtggcccagtactcatttacttgcaccattcattttaat
tttcgaaattttctacctcaaatttgggaaagacagattgatatgataaatcaaaagggt
ggaggtaccaatactgcttctgcaatccagaaagttgttgatgaggtattttcagttagt
ggggggtcgagtgatggagcgtcgaagatcctgatcgtgatcacagatggagagtctcag
gatggaggcaacctcccgtcagctacttatgcagctaacatcaaatctattgttcgattt
gctattggggtgggctctgcctttaacaaacaaagcgccaaagacgagttggacacaatc
gcctcacttccttctcagacacatgtgttccaagtgagcagctttgaagcgcttaaccaa
atcagcagaactttgcagaacagcatcttcaatatcgagggctcgcaggctgcaggagcg
tcactggagatggagatggcacaagaaggattcagtgctgcgtacattcctgagggagga
tatcatataggaactgttggagccttccagtggaaaggaggataccagtcctacgtgaaa
atagaccatcagcccaccttccagaacatgaagggagagtctgatagctacctgggttac
tccatgagcactgcgaggacgaggtttggcacgttcacggtggtgggtgctcccagagcg
gctcacaggggccaggtgatggtcgtgtccccggggagaaccgaccagactctacagttt
acaggacagattggggcgtactttggggcggtggtttgtgcgatggacgtggatggtgat
tcctactctgacctggtgctggtgtcgtctcccatgtacacacagagagacagagaggga
atgatattcatctgtacccttactgagaagaaaggagtgtcctttcctggaggacgtgag
aacatgttgcagggggaggcaggagagaggagcaggtttggcatgtcgctcgcccctctg
ccggacctcaataacgacgggttcaacgacctggcggtgggagctcctctggaggatgac
ggccaggggagcgtctacatcttccacgggcagagaggcggcatcaacaacctctactcc
cagagaatcgcagggtctgaggtgcattctgggatgaagttctttggcctgtccatcagc
cagtcgtctctggacctcagtggagacactctcccggacatggccgtgggctccaagggg
gccgtcatcttactcaggtccaaacccatagtgaccgtgaatgttgaagtgtcttttaac
ccgaccagaatctccaccaaccactcagactgtgtgacccctcttcctcacaccgcgaca
gtctgcttcaccatgaccccgcacactcaaggacaaacagctcgagcgcaggttaattac
acgttgacactggacgcaagacgcaaagcgcccaacttccgtgcttactttcagctcaaa
caacgacaggacacaaacatggtcatcctggacctgaaggagacttgcaacaaacacaac
ttcttcgttgaggcttgcccggaggactctctcaacttagtccacaatgaagtttcgttc
agtttcgaaggcttgccttcctcagactctctctctcccagcctgctccagggctccacc
accacctccaatcacccgctggactttgagatcaactgtggatctgataacaactgtatc
gacaacctcaaagtggattttaattttactggttcctctgagctgagggtaggaatcgac
gacgtgctgagtctgaccgtgtcgatggagagcagggaggagaactcctataacagccgg
gtggtccttcgctaccctgccggcctctcctacagacacttcacccccgtccaggggaga
gtggaatgcaactcgttagatagtgaatctgaaggaacgacaggaagaagcgaatgcacc
atcaacaagcccatcttcaagaccaacagcaaggctgtcttcaccatctcctatggaata
gatagaaacagtcagtttgaccccagggtgaacttcagtgccaatgccacaagtggaaac
gttcatgccgcagggagtgacctgttcatacacagagacatcagggtgcagtacagcatt
tatgtgttgctttccagagttgaggattctaccagctacataaacttcactgctgagaaa
aacgatttgcagaaacctgtgttgcagtcattccaggttttaaactttgccagagatttc
aacctcaccgtgataatcaaggtgcccatgcagcttggtgagacagacatctgggttgac
tccagagggatgcagattccaggatgcaaaagaggaaaagatgaggaaccaactgtcaga
gactttgtggacaagttgaagagaaaatcccctctggactgtgcggtggccaggtgtggc
gtgttcacctgcagcgtgttcgtgagaagagacgactcccttgtctacagcatctctgga
aacatcagttcaggatggatacaacagattggcctgatgtccggccagttctctctgacc
agcacggccaccctggactacgacagagaccagtacatctacgactcccaggactccaag
aacaaccctcccatccagaaggtagaaacgtacgtggaggtgtttcctgaggtggacctg
actaaggagatcgtgggcggctccctgggtgggctggtgctgctggcgttgatctcggct
gctctttataaggctgggttttttaagagtcagtacaagcagatgttggagaactcgggt
gatcctgagggagcggaccctgaatatgagaacaccgtgctggaggagaacaactag
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