Osmerus eperlanus (European smelt): 134031003
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Entry
134031003 CDS
T10927
Symbol
sec31b
Name
(RefSeq) protein transport protein Sec31A isoform X1
KO
K14005
protein transport protein SEC31
Organism
oep Osmerus eperlanus (European smelt)
Pathway
oep04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
oep00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
134031003 (sec31b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oep04131
]
134031003 (sec31b)
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
oep02044
]
134031003 (sec31b)
Membrane trafficking [BR:
oep04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
134031003 (sec31b)
Secretion system [BR:
oep02044
]
Sec (secretion) system
Eukaryotic Sec-SRP protein
134031003 (sec31b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
Beta-prop_RIG_2nd
Beta-prop_EML_2
WD40_Prp19
Beta-prop_CAF1B_HIR1
WD40_WDHD1_1st
WD40
Beta-prop_TEP1_2nd
Beta-prop_EML
EIF3I
WDR55
Beta-prop_EIPR1
TPR_Sec16
Beta-prop_WDR35_TULP_N
WD40_MABP1-WDR62_2nd
Beta-prop_DCAF4
Beta-prop_HPS5
Beta-prop_IFT140_1st
MukF_M
Prp18
Motif
Other DBs
NCBI-GeneID:
134031003
NCBI-ProteinID:
XP_062330445
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Position
12:complement(6544719..6555762)
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AA seq
1212 aa
AA seq
DB search
MKLKEIQRTAHQSWSPASHHPISLALGTSAQQLDASFNTTAALEIFELDFADPSLEMKLK
GSLPSSNRLHSLIWVDFETGEDGTGGRLIGGSENGTVTVYSPGAIVTPGAEAVIGQSDKH
TGPVRALDFNPFQSNLLASGANDSEIYIWDLNNFNNPMTPGTKSQVMLPPEDVSVVSWNR
QVQHILASANPSGKAVVWDLRKNEPIIKISDHSNRMHCSGMLWHPEVATQLVLASEDDRL
PVIQMWDLRFATSPLKVLENHTRGILSISWSQADPELLLSSAKDNRILCWNPNTGEVIYE
LPTTNQWCFDVQWCPRNPALLSAASFDGRISVYSVMGGSLEAQQQSTAHMISSSFDTMDP
FGTGQALPPLQVPQPATQTTIVPPLKKPPKWVRRPVGASFAFGGKLITFGSAKPPQVQSP
QVLPRQVFVSQVTTETEFLQRSRELQVALQSGSFSSYCQAKIHSTISDSDKDLWKFLLVN
FEDEARVKFLRLLGFSKDELDRKISTCLGKSLQPNGHGVDASDLAEKMQQLSAQRSDETS
GAGSGSMTSGSASPSDFFSQIPQKKTVFQIPVSADTDGLISQALLVGNFAGAVDLCLNDG
RYAEAILLAISGGEDLLKKTQQRYLDKQRSSISMLISSVVTQNWADIVHSCDLDNWKEAL
AALLTYAHPEEFAHLCDTLGVRLEAQATEKHRLQACLCYICSGNIEKLVECWVMQRDCSS
PLVLEDLVEKVMILRKSIELLRNSEVAVKSPVLADKLTQYAGLLASQGSLATAMSYLPES
PDQAGIMMMRDRLFHAQGEVAVGPRPPVPYNRVNVGATKPSAASPPQPQPQEAPSTGGSQ
PHSSNVFSPQVAVANTGLPPSQMGLPPSSHVLPPGGPRSSLRPAYPQHPSTAPGFPPQQS
FQPQPMSSSGPSIFSPSGPQMPGASLSGPPLPQLSSPAPGGLSTMPPSSHPSRPMPPGPQ
PRGHVPMFPGAPHNQAHPPPTGSLYQPMGLGYPPGGPGTPATKSFSAPSVPPPPTGFFPW
LNSHFDDEGSQDGWNDPPAVRGAPRKKVPDNYTPPAPITAPVMGFPMEATQPHEGPQVPP
GAPQEPNVQLLQQLPAEKVEQREIPAEHVVLKSTFDSLVQRCQLAAGDPQTKRKLEDASK
RLGYLYDKLREQTLSHNILGGLHEISRCVASQNYQRGLEVHTQVVSSSNFSDISAFMPIL
KVVMTIAIKLGV
NT seq
3639 nt
NT seq
+upstream
nt +downstream
nt
atgaagctgaaggaaattcagaggactgcccaccagtcatggagtcctgcctctcaccat
cccatttctctggccttgggcacgtcagcacaacagttggatgcctcattcaacactact
gctgccctagaaatatttgagttggattttgcagacccctctctggaaatgaaactcaaa
ggttcccttccttcatctaatagattacacagtctcatctgggtggattttgaaacggga
gaagatgggacaggaggaaggctcattggaggcagtgagaatggcacagtaacagtttac
agcccgggggccatagtaacccctggagcagaagcagtgataggacagtctgacaagcac
actggccccgtcagagcactagacttcaacccttttcagagtaaccttcttgcatcgggg
gcaaatgattcagagatctatatctgggacctgaataacttcaacaatccaatgacaccg
ggaacaaagtctcaggtaatgttgcctcctgaagatgtgagtgtcgtgtcctggaataga
caggttcaacacatcctggcctcagccaaccccagtggcaaagcagttgtctgggacctg
aggaagaatgagcccattatcaagatcagtgaccacagtaacaggatgcactgctcaggc
atgctctggcacccagaggtggccacacagttggttctggcctctgaggacgaccggctg
ccagtcattcagatgtgggaccttcgctttgccacgtcacctctcaaagtcctggagaac
cacacaaggggaattctctccatatcctggagccaagctgacccagagctgctgctcagt
agcgctaaagacaatcggatcttgtgctggaacccaaacactggcgaagtcatttatgag
ttgcccacaaccaaccagtggtgcttcgacgtgcagtggtgccccaggaacccagccctg
ctgtctgcggcctccttcgacggcaggatcagtgtctactccgtgatgggaggaagcctg
gaggctcagcagcagagcaccgcccatatgatctcatcctcattcgacaccatggatccc
tttgggaccggacaggctctgccccctctacaggtcccacagcctgcaacccagaccacc
atcgttcccccgctgaaaaagcccccaaagtgggtgcgcaggccagtgggggcttcattt
gcttttggtgggaagctcattaccttcggcagcgccaagcctcctcaggtccagagtcct
caggtcctccccaggcaggtgttcgtcagccaggtcaccacggagacagagttcctgcag
cgctcccgggagctccaggtggcgctgcagtctggatccttctccagctattgccaggct
aagatccacagcaccatctccgactctgataaagacttgtggaaattcctcctggtgaac
tttgaagatgaggcacgggttaagtttctgagacttttgggtttcagcaaagatgagttg
gacagaaagatttcaacctgcttgggaaagagcctgcagccgaatggccacggtgtggat
gccagtgacctggctgagaaaatgcagcaactctctgcgcagaggtcagatgagaccagt
ggtgccggcagtggcagcatgacctccggttcagcttccccgtctgacttctttagtcag
ataccacagaagaaaaccgtcttccaaatccctgtttcggccgacacggacgggctgatc
agccaggctcttctggtggggaactttgcgggagccgtggatctgtgtcttaacgacggt
cgctatgcagaagccatcctgctcgccattagtggaggagaagatctgctcaagaaaacc
cagcagagatatttggacaagcagaggagcagtatctcaatgctgatctcgtcggtggtg
acccagaactgggctgacatcgtccatagctgtgatctggacaactggaaagaggccctc
gccgctctcctgacctacgctcacccggaagagtttgcccatctgtgtgacacgcttgga
gtacgtctggaagctcaggcgacggagaaacaccggctgcaagcctgcctgtgctacatc
tgctctggaaacattgagaagttagtggagtgctgggtcatgcagagagactgctcctct
cccctcgtcttggaggatcttgtggagaaggtgatgatcctgcgcaagtccatcgagctc
ctgcggaacagcgaggtagcggtgaagagcccggtcctggccgacaagctcactcagtac
gccggcctcctggcctcgcaaggcagcctggccaccgccatgtcctacctgccagagagc
cccgaccaggcaggaatcatgatgatgagagataggctgttccatgcccagggcgaggtg
gccgttggtccccggccgcctgtcccctacaacagagtcaacgtgggagcgaccaagcct
tctgctgcttcccccccacaaccacaaccacaggaagccccgagcacgggaggcagccag
ccccacagttcaaatgttttctccccgcaagttgccgtggccaacaccggactacctccc
tcccagatggggttgcccccctcctctcatgtcctgccccccggtgggccccggtcgagc
ctgcgacccgcctacccccagcatccttccaccgctccaggcttccctcctcaacagtca
ttccagccacagcccatgtcaagcagtggaccctccatcttctccccttcaggccctcag
atgccgggggccagcctgtccggaccccctctgccccagctatcctccccagcccctggg
ggcctctccaccatgcccccctcctcgcacccttccagacccatgccacctggcccccag
cctagaggccatgtgcccatgtttccgggggcccctcacaaccaggcccatccaccccca
acaggcagcttgtaccagcccatggggctagggtaccccccaggcggccccggaactcca
gccaccaagtcattctctgccccgtcggtaccccctcctcccacaggcttctttccttgg
ctgaattcccattttgacgatgaaggatctcaggatggctggaatgatccgcctgcagtc
cgtggtgctccaaggaagaaggttcctgataactacacccctcccgcccccatcacagcc
cctgtgatgggcttcccaatggaggccacccaaccccacgagggcccccaggtcccacca
ggagccccccaggagcccaacgtgcagcttctccaacagctgccagcagagaaggttgag
caaagggagatcccggctgagcacgtggtcctcaaaagcacctttgacagccttgtgcaa
cgctgccaactagctgctggagacccacaaacgaaaagaaaacttgaagacgcgtccaaa
cgccttggttatctctatgacaaactaagagaacaaacgctctctcacaatatccttggt
gggttacacgagattagccgctgtgtggccagccaaaactaccagcgcggtctggaggtc
cacacccaagtggtcagcagcagcaacttcagcgatatctccgccttcatgcccatcctc
aaagtggtcatgaccatagccatcaagctgggggtctga
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