Osmerus eperlanus (European smelt): 134031040
Help
Entry
134031040 CDS
T10927
Symbol
stub1
Name
(RefSeq) E3 ubiquitin-protein ligase CHIP
KO
K09561
STIP1 homology and U-box containing protein 1 [EC:
2.3.2.27
]
Organism
oep Osmerus eperlanus (European smelt)
Pathway
oep04120
Ubiquitin mediated proteolysis
oep04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
oep00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
134031040 (stub1)
04120 Ubiquitin mediated proteolysis
134031040 (stub1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
oep03110
]
134031040 (stub1)
04131 Membrane trafficking [BR:
oep04131
]
134031040 (stub1)
04121 Ubiquitin system [BR:
oep04121
]
134031040 (stub1)
Enzymes [BR:
oep01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
134031040 (stub1)
Chaperones and folding catalysts [BR:
oep03110
]
Other chaperones and cochaperones
Others
134031040 (stub1)
Membrane trafficking [BR:
oep04131
]
Autophagy
Aggrephagy
Other aggrephagy associated proteins
134031040 (stub1)
Ubiquitin system [BR:
oep04121
]
Ubiquitin ligases (E3)
U-box type E3
134031040 (stub1)
Multi subunit type E3
STUB1-CHIC2 complex
134031040 (stub1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
U-box
CHIP_TPR_N
TPR_1
TPR_2
ANAPC3
TPR_8
TPR_11
TPR_16
TPR_12
TPR_17
TPR_BSK1_C
TPR_19
ARM_TT21_C
TPR_7
TPR_9
TPR_CcmH_CycH
RdRP_head
SRP_TPR_like
Coatomer_E
Motif
Other DBs
NCBI-GeneID:
134031040
NCBI-ProteinID:
XP_062330493
LinkDB
All DBs
Position
12:complement(15987524..15991994)
Genome browser
AA seq
282 aa
AA seq
DB search
MAGSPEKSSTAQELKEQGNRLFLCRKYQEAATCYSKAINRNPSVAVYYTNRALCHVKLQQ
HDKALSDCKHALELDSQSVKAHFFLGQCHLELENYDEAIGNLQRAYNLAKEQRLNFGDDI
PSALRMAKKKRWNSIEDKRINQENELHAYLTKLILAEKERELEDKQEEDNQNGSNAVKIK
SKHDRFLKDMEELFSQVDEKRKKREIPDYLCGKISFELMREPCITPSGITYDRKDIEEHL
QRVGHFDPVTRSPLTQDQLIPNLAMKEVIDAFIQENGWVEDY
NT seq
849 nt
NT seq
+upstream
nt +downstream
nt
atggcgggcagcccagaaaagagttccacggcgcaggagctaaaagaacagggtaaccgg
cttttcctttgccgcaaataccaagaggcggccacctgctacagtaaagccatcaaccgt
aatccttcagtggcagtgtactacactaaccgggctctgtgccacgtcaagctacagcag
catgacaaggcactgtcggactgtaagcacgccctggagctggacagccagtcggtcaag
gcacacttcttcctgggccagtgtcacctggagctggagaactacgacgaggccatcggc
aacctgcagagagcctacaacctggcgaaagagcagaggctgaacttcggagacgacatc
cccagcgcactgcgcatggccaagaagaaacgctggaacagcatcgaagacaaacggatc
aaccaggagaacgaactgcacgcctatctcaccaaactcatcctggccgagaaagagagg
gaactggaagacaaacaggaggaggacaatcaaaatggaagcaacgctgtcaagatcaaa
tcgaaacatgataggtttcttaaggacatggaagagctcttctctcaggtggacgaaaag
agaaaaaagcgtgagattcctgactacctttgtgggaagatcagcttcgagctgatgagg
gagccgtgcataacccctagtggcatcacctacgaccgcaaagacatcgaggagcatcta
cagcgagtgggacatttcgacccggtgactcggagtcctctgacccaggaccagctgatc
cctaacctggccatgaaggaggtgatcgatgccttcatccaggagaacggctgggtggag
gactactga
DBGET
integrated database retrieval system
