Osmerus eperlanus (European smelt): 134031043
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Entry
134031043 CDS
T10927
Symbol
sox9a
Name
(RefSeq) transcription factor SOX-9a
KO
K18435
transcription factor SOX9 (SOX group E)
Organism
oep Osmerus eperlanus (European smelt)
Brite
KEGG Orthology (KO) [BR:
oep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oep03000
]
134031043 (sox9a)
Transcription factors [BR:
oep03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
134031043 (sox9a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
Sox_N
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
134031043
NCBI-ProteinID:
XP_062330499
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All DBs
Position
12:complement(9569855..9573677)
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AA seq
491 aa
AA seq
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MNLLDPYLKMTEEQDKCLSDVPSPSMSEDSAGSPCPSGSGSDTENTRPSENGLLGPDSHL
GEFKKDEEDKFPVCIREAVSQVLKGYDWTLVPMPVRVNGSNKNKPHVKRPMNAFMVWAQA
ARRKLADQYPHLHNAELSKTLGKLWRLLNEGEKRPFVEEAERLRVQHKKDHPDYKYQPRR
RKSVKNGQGESEDGCEQTHISPNAIFKALQQADSPASSMGEVHSPGEHSGSQGPPTPPTT
PKTDIQTGKLDLKREGRPLPDSTGRQLNIDFRDVDIGELSSDVISHIETFDVNEFDQYLP
PNGHPGGLVSYTGGYGLGGAAVSQPTGGAASWLAKSQGQGQQSQLSLTTLGSSSGDQGAP
TQRPPSTSGSTPTHIKTEQLSPSHYSEQQQCSPQHAAYGSFSLQHYSSASSPYPSITRAQ
YEYSDHQGGATSYYSHAAGQGSGLYSTFSYMSPSQRPMYTPIADPTGVPSIPQNSPQQWD
QQPVYTQLTRP
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atgaatctactcgacccatacctgaaaatgacagaggaacaagacaaatgtctctctgac
gtcccgagtccgagcatgtccgaggactctgccggatctccctgcccgtccggttctggc
tccgatactgagaacactagaccgtcagaaaacggcttgctgggtccggacagccacctt
ggcgagttcaagaaggacgaggaggacaaattcccggtgtgcatacgcgaggcggtgtcc
caggtgctgaagggttacgactggactctcgtgcccatgccagtccgcgtaaacggatct
aataaaaacaagccccacgtgaagagaccgatgaacgcgtttatggtttgggcacaagca
gcgcggaggaagttggcggatcagtacccacatctccacaacgcggagctgagcaagacc
ctggggaaactctggagactactcaacgagggagaaaagcgtccgttcgtggaagaggcg
gagcgcctgcgggttcagcacaagaaagaccatccggactacaagtaccagccccggcga
agaaagtcggtaaaaaacggtcagggcgagtcggaggacggttgcgagcagactcacata
tcgcccaacgccatcttcaaagccctccagcaggctgactcccccgcctcaagcatggga
gaggtgcactcccctggcgaacactcagggtcccagggcccccccacccctcccaccacc
ccgaagaccgacatccagacgggcaagctggacctgaaacgtgagggacgcccgttacct
gacagcaccggccgccagctcaacatcgacttccgggacgtggacatcggcgagctgagc
agcgacgtcatctcccacatcgagacgtttgacgtcaacgagttcgaccagtacctcccc
cccaatggccacccgggggggctggtctcctacacgggcggctacggcctcggcggtgcc
gcggtcagccagccgacagggggcgccgcctcctggctggcgaagagccagggccagggc
cagcagagccagctctccctgaccaccctggggagcagcagcggggaccagggcgccccg
acccagaggccccccagcaccagcggcagcacccccacacacatcaagacggagcagctt
agccccagccactacagcgagcagcagcaatgctccccccagcacgcggcctacggctcc
ttcagcctgcagcactacagctccgcctcctccccctacccctccatcacccgggcgcag
tacgagtactccgaccaccagggcggcgccacctcctactacagccacgcagccggccag
ggctctgggctgtactccaccttcagctacatgagtcccagccagaggcccatgtacacc
cccatcgctgaccccacaggggtcccctccatcccccagaacagcccacagcaatgggac
cagcagccggtgtacacacagctgaccaggccttaa
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