Osmerus eperlanus (European smelt): 134031112
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Entry
134031112 CDS
T10927
Symbol
tdrd1
Name
(RefSeq) tudor domain-containing protein 1 isoform X1
KO
K18405
tudor domain-containing protein 1/4/6/7
Organism
oep Osmerus eperlanus (European smelt)
Brite
Chromosome and associated proteins [BR:
oep03036
]
Eukaryotic type
Gene silencing
piRNA pathway
134031112 (tdrd1)
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TUDOR
SMN_Tudor
zf-MYND
Motif
Other DBs
NCBI-GeneID:
134031112
NCBI-ProteinID:
XP_062330598
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All DBs
Position
12:10114084..10123131
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AA seq
1159 aa
AA seq
DB search
MKRTFPQSMVMPNMPLRRPSTSQGDAPVSPKTFTPPIGTPERPLVTLNGDGGGAESVVRS
LSDSLPPMTVKLCNYCSQQGNLLCTRCKRTWYCSLACQKANWNAHRHLCMPSTPESPTSD
PKETPLSPVGNGSNTNSKVNNCDVAGPRRVYLQNLHKNDLSKGAEVQATVVELRSPGRFF
IHVQSPETMESLKTISGELQKYSVSPLRSTYVPDQREVCAVKFSLDQNWYRGMVQSVASD
QKTASILYIDFGNEENVTMDMIKPLAASLELMPPCAVECRVAGIEPVTDSWTEECIIAVK
QLVAGKSLTVTVVDVQESDSVHSVDVLLSPIGKNLSTLLVAQGYAAKVTNKQCSEQDIVS
ASLENFRSQSGGKNENTDARSPDPLTQGLGDSFTAVVTHLQSPDDIICQKLENASVIQEL
QLKLRERCCQAPPASANFRPAPGTVCCALFSEDNQWYRATVLAYSSEERVCVGYIDFGNS
EEVDLGRLLPLSPELLVLPMQAIPCALAGVRPVAEAWSEDGVQMLRRTVCNRFLRVEILG
ESEGRALVTMVDEASDPQANVAEVLVATGYALPADPSPPRDAEAEAAPGVEALEWSCVEL
PCEGQKVAMLVSVIESPGEFYCNVYSTKEFQVLAELRLELTQYCEANNTPFTPTVGVPCC
AMFSGDGVWYRGMVQEVCEGKARVFFVDYGNSGEVELPHLRVITPHLLRHPFQAIRCYLA
GVEPPGFQWSSESLRRFQALCIGHQLLGRVLSITEQGYGIELERGGQNIRATLFSEQLAR
VSGQQLTPASKETTASTGPPTAMPTNQKEHHLEMPKLAIQKEAPAQVPMPKEAASFPVDW
RTEELPTHETFQPRIAAVVSPSLFYLFNPNQVDREQLQQVMRDLSVYCSSQPPPSQGTPP
PGAACCAQFSADKSWYRAVVLETRDMEATVLYADYGNSETVALSCILPIPKELLQLPFQI
CRCALQGKENFPVVWPAEVLELFRVLLSDGVLASKQTYDGRCNLLSVTLSNEHGQGHLNS
MILEGLQNTKAQAKTVSPTPHHTLTATTTHKPDQITPTPKPHPAPTAATTQNAAGYMETA
AVILETPGPRHSGESAKPASAPVNEHTRQVKREPKDPQSATCSKSTNGLPCCCLQIKTQI
DNLEGLILSLMKQLGGLPN
NT seq
3480 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgcacgtttccccaatcaatggtgatgcccaacatgccactgaggaggccttcc
accagccagggcgatgccccggtctctcccaagactttcaccccgcccatcggaacacca
gagcggcctctagtgactttgaacggtgatggcggtggtgccgaatctgttgttcgttct
ttgagtgattccttgccacccatgactgtgaagctgtgcaactactgcagccagcaagga
aaccttctctgtacacgctgcaagagaacctggtactgctcattggcatgtcagaaagcc
aactggaacgctcacagacacttgtgcatgccaagtacgccagaaagccctactagtgac
ccaaaagaaactccactgtcaccagtaggaaatggatccaacacaaactcaaaggtgaac
aactgtgatgtggctggtccccggagagtctacctccagaatctgcacaagaacgacctc
agcaaaggagctgaagtacaggcaactgtggtggagctccgaagccctggcaggtttttc
atccacgtgcagagccctgagaccatggagtctcttaaaaccatttctggagaactacag
aaatacagcgtcagtcctctgaggtccacctatgtgcctgatcaaagagaggtctgcgct
gtcaaattctccttggatcagaactggtacagaggtatggtccagtctgtggcttcagac
cagaagactgccagtattctctatattgactttggcaacgaggagaatgtgacaatggac
atgattaagcccctggctgctagcctggagctcatgccaccttgtgccgtggagtgccgc
gtggcagggatcgagcccgtgacggacagctggacggaggagtgtatcatagcagtgaag
cagctggtcgcagggaagagcctgacggtgactgtggtggatgtccaggagagcgacagc
gtccactctgtggacgtgttattgtctcctattggcaagaatctcagtaccttactcgtg
gcccaaggatatgcggcgaaggtgaccaacaagcagtgctctgaacaggacattgtgagt
gcttccctggagaacttccgtagccagtcgggcggtaagaatgagaacacggatgcccgg
tcacccgacccgctgacccaggggttgggagactccttcactgctgtggtcactcacctg
cagtcccctgacgacatcatctgtcagaagttggagaacgccagtgtgatccaggagctg
cagctgaagctgagggagcgctgctgtcaggctcctccagccagtgccaacttcagaccg
gcccctggcactgtctgctgtgccctgttttcagaggacaaccagtggtacagagccact
gtgctggcctactcgtccgaggagcgagtgtgtgtggggtacattgactttggcaactct
gaggaggtggacctggggcgcctgctgcctctgagcccggagctgctggttctgcccatg
caagccatcccctgcgccctggccggcgtgcggcccgtggcggaggcctggtccgaggac
ggcgtccagatgctgcggcgcaccgtgtgcaaccgcttcctgcgcgtggagatcctggga
gagagcgagggcagggcgctggtcaccatggtggacgaggccagcgacccccaagccaac
gtggccgaggtgctggtcgccaccggctacgccctgcctgctgaccccagccccccccgg
gacgcggaggctgaggccgcccccggggtggaggccctggagtggtcctgtgtggagctt
ccctgcgagggccagaaggtggcgatgttggtcagcgtgatcgagagcccgggagaattc
tactgcaacgtctacagcactaaagagtttcaggttctcgctgagctgaggttggagttg
actcaatactgtgaggcaaacaacacccccttcacgcctacagtgggagtgccctgctgt
gccatgttctctggagacggtgtgtggtaccgaggtatggtgcaggaggtgtgtgagggc
aaggccagagtcttctttgtggactacggcaactccggcgaggtggagctgccccacctc
cgagtcatcacgccacacctcctcagacatcccttccaggccatccgctgttacctcgca
ggtgtggagcccccaggcttccagtggagcagcgagtctctcagacggttccaggccctg
tgcatcggccaccagctgctgggccgagtcctctccattacggagcagggctacggcatc
gagcttgagcgcggcggtcagaacatccgtgccaccctcttctctgaacagctggccaga
gtgtccggtcagcagctcacaccagcttctaaagagaccacagctagcaccggcccaccc
acagccatgcccaccaatcagaaggaacatcacttggagatgcccaaactggccattcag
aaggaggctcctgctcaggttccgatgccaaaggaagcagcttctttccctgtggactgg
aggactgaggagttacccacccatgagaccttccagccccgcattgcagctgtggtcagc
cctagcctgttctatctgttcaaccccaaccaggtggaccgggagcagctgcagcaggtg
atgagggacctgagtgtctactgcagcagccagcccccccccagccagggcactcctccc
cctggagctgcctgctgtgcccagttctctgcagataagagctggtacagagcggtggtg
ctggagacccgggacatggaggccacggtgctctatgcagactacggcaactctgagacg
gtggccctctcctgcatccttcccatccccaaagagctgctgcagctgcccttccagatc
tgccgctgtgccctgcagggtaaggagaactttcccgtcgtgtggcctgcggaggtcctg
gagctgttccgagtcttgctgtccgacggcgtcctcgcctccaagcagacctacgatgga
cgctgcaacctgctgtcggtcaccctgagcaacgagcacggccagggccacctcaacagc
atgatcctggagggcctgcagaacaccaaggctcaagccaagaccgtctcacccacacca
caccacaccctgactgccacgaccacgcacaaaccggatcaaatcacgcccacgccgaaa
ccgcacccagccccgaccgctgcaaccacccagaacgcagctggctacatggagaccgcc
gctgtcatcttggagaccccagggccgagacacagtggggagagtgctaagcctgcttca
gctccagtcaatgaacataccagacaagtgaagcgtgaacccaaggacccgcagagtgcc
acttgttcaaagagcaccaacggattaccatgctgctgtcttcaaataaagacacagatt
gataaccttgaagggctgattctgtctctaatgaagcagttaggaggactgcccaactga
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