Osmerus eperlanus (European smelt): 134031323
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Entry
134031323 CDS
T10927
Symbol
arid5b
Name
(RefSeq) LOW QUALITY PROTEIN: AT-rich interactive domain-containing protein 5B
KO
K25857
AT-rich interactive domain-containing protein 5
Organism
oep Osmerus eperlanus (European smelt)
Brite
KEGG Orthology (KO) [BR:
oep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oep03000
]
134031323 (arid5b)
Transcription factors [BR:
oep03000
]
Eukaryotic type
Helix-turn-helix
ARID
134031323 (arid5b)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
ARID
Motif
Other DBs
NCBI-GeneID:
134031323
NCBI-ProteinID:
XP_062330887
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All DBs
Position
12:12376542..12440541
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AA seq
1298 aa
AA seq
DB search
MEPNSLMWVGSPCGSHGPYIFYKAFRFHLHSKPRILSLGDFFFVRCKPGDSICVAELQLL
WEERTTKQLLSSSKLYFLPEDTPQGRTVNHGEDEIIAVSEKVIVRLEDLVKWTEWDSSGW
TKGLKAVPLKPSTVLWEQGKNGQREPHLLRYRESTLNSGLNFKDVVKEKAELGEEGDQKR
AVVLSYPQYCRYRSVLARLRERPPSLLTQQVVLALGGIASLTSNTHILYCRDTFEHPTLL
DNESVCDEFAPNLKGRPRKKKPSVSQRRDSLGQGHSGGXKEAGSTEGKASTKTSAPAKSR
ASSSSSSSSSSKRGSSSEEKAQAQALEGGSGDECRAEEQTFLVALYKYMKERKTPIERIP
YLGFKQINLWTMFQAAQKLGGYELITARRQWKHVYDELGGNPGSTSAATCTRRHYERLIL
PYERFTKGEEDKPLPPAKPRKLEAGPQEGGVAKTKAGSTVKRPKEEQSQKSKGDKDAAAI
VLEPSASQDSEDSEKSQEEESQVKTEPQLAPPSLQASGEGRTTSDEDEELHLTVKEEEVT
HNGCGQEKDVPCRSTRWDSDSHQPALSITEDDDVFPVVTPEPVNHSHPAKDMLQREQAEL
GGSCTQGKDDQDGLEDQCHVGMVLPTLKQRPHQPSTVSAPEPPSERAELPPREDSCSSYS
PHLYPHRANPGIMSPLAKKKLLSQVSGSGLPNHNHYASYGPPPPLISKALANGSTEEPAG
QPAMGSAADVGLVHRPSVIQHAQSSKPRGGEERREGLQRDTVAAGETYPCSDLPKHHPHP
YPHPQPQPHPYPYPHPQAQSQPYSHHHHHHHPSAEPYLLREEEDRAPEMPRPGQTPSFLT
DFYSSPHLHSLYRQTEHHLTQGQAQGHGERERLGELGRYREACLPRECETTPGFPPTSQP
HPDSTSAAVAIGYGACMSQQDKMVASSNGERTTATSEDQPTDLSLPKLSPHKHSHAQSHT
HTVPHHHHPHQHPTMHQEVKAPLLFQTSSPQGSGGEYHPRACRVPPMTMTPPTHTPRQAL
AVDPNPRTSERTSERTSERTSERASNGRGGGRGGEDASLGGGYKVDELRGSSLSPILNAK
VSPHNVCTARPLKRMLDELENHAPERKIRAVTPMHSSSSSPYSSATPKDGPSTPTPPLRK
ARSPELDSDLMVLKPGEPVHTHPNVHISGFLDGHKFPLHSAPIFPGLYPGAFVSHVQDMC
EGLGSPLPHGYPPHPLQYLKNQAVLSPIVPPFAIHSFMMQRQLLAQAATSPAHMYRHPMG
ASYGELLHHGLYPMSALNPQPAFNPPQLSSVHPSTKLS
NT seq
3897 nt
NT seq
+upstream
nt +downstream
nt
atggagcccaactcactcatgtgggtcggctcgccttgcggttcacacggaccttacatt
ttctacaaggcttttaggtttcaccttcatagcaaaccaagaatattgtcccttggcgac
tttttcttcgtgagatgtaagccaggggattccatttgtgtagcagaactccagctgctg
tgggaagaaaggacaaccaaacaacttttatccagctccaaactttattttctccctgaa
gataccccccaggggagaactgtcaaccacggagaggatgagatcatcgcagtgtccgag
aaggtgattgtgcggttggaggacctggtgaaatggacggagtgggactcgtcaggatgg
accaaaggactgaaggccgtgcccctcaagcccagtacagtactctgggagcagggcaag
aatggtcagagagaaccccatctgcttcggtaccgagagtcgacactcaacagtggcctc
aacttcaaagatgttgtaaaggagaaggctgaacttggtgaggaaggagaccagaagcga
gctgtggttctgagctacccccagtactgccggtaccgctcggtcctggcccggctccgg
gaacgtcctccgtcgctgctgacccagcaggtggttctggcgctgggaggcatcgcctcg
ctcaccagcaacacgcacattttgtactgcagggatacctttgaacatcccacactgctg
gacaacgagagtgtctgtgatgagttcgctccaaacctgaaggggcggccacggaagaag
aaaccatcagtgtcacagcgacgagactccctggggcagggccactctggggggnncaag
gaggctggcagcactgagggcaaggcctccaccaagacatcagcgccagccaagtctagg
gccagcagtagcagcagcagcagcagcagcagcaagaggggctcgtcctcagaggagaag
gcccaggcccaggccctggagggagggtcaggagacgagtgtcgggctgaggagcagacc
ttcctggtggctctctacaaatatatgaaggagaggaagacccccatcgagaggatccct
tacttgggcttcaaacagatcaatctgtggaccatgtttcaagctgcacagaaactggga
gggtacgagctgataacagcacgccgacagtggaaacatgtttacgatgagttgggtgga
aacccaggcagcaccagcgcagcaacctgtactcgcagacactacgagaggctgatcctg
ccctatgagaggttcactaaaggcgaggaggataagcccctcccaccagccaagccccgc
aagctcgaggcgggcccccaggaagggggcgtggccaagacaaaggcagggtccacagtg
aagcggcccaaggaggaacaatcccagaaatccaagggtgacaaagatgcagcagccata
gtcctggagccctcagcatcgcaggattcagaggactctgagaagtcgcaggaggaggag
tcccaggtgaagacagaaccccagttagccccgccttctctgcaggccagcggcgagggg
cggaccaccagcgatgaagacgaggagctacatctgacagtgaaggaggaggaggtgaca
cacaatgggtgtggccaggaaaaggatgtgccatgccgctcgacccgctgggattccgat
tcccaccagccagctctatcaatcacagaggacgatgatgtatttcctgttgtcactcct
gaaccggtcaaccactcccacccagccaaggacatgttgcagagagagcaggctgagctc
ggaggttcctgtacccaggggaaggatgatcaggatgggctggaggaccagtgccatgtt
ggtatggttctgcctaccttgaagcagagaccccaccagccctccacagtttcagcacca
gagcccccctcagagagagctgagctgccccccagagaggactcctgttccagctacagc
ccacacctttacccccacagagccaaccctggcatcatgtccccactggctaagaagaag
ctgctgtcacaggtcagtgggagtggactgcccaatcacaatcactacgcttcttacggt
ccgcccccaccgttgatcagcaaagccttggccaatggcagcacagaggagccagctggg
cagccagccatgggctcggcggcggatgtggggcttgttcatcgtccgtcagtgatccag
catgcccagagctccaaaccacgtgggggagaggagaggagggaggggctgcagagagac
acagtggcagcaggggagacatacccctgcagtgatctacccaagcatcacccacacccc
taccctcacccccagcctcaacctcacccttacccttacccccaccctcaggctcagtcc
cagccttactcccaccaccaccaccaccaccatccctcagctgaaccctacctgttgagg
gaggaggaggacagggctccagagatgcccaggccaggccagacccccagcttcctcact
gacttctactcctctccacacctccacagcctgtacaggcagactgagcaccacctcacc
cagggacaggcacagggccacggggagagggagaggctgggcgagctggggaggtaccga
gaggcctgcttacccagagagtgtgagaccactcctgggttccccccaacctctcagccc
caccccgactccacctctgccgccgtcgccataggttatggtgcgtgcatgagtcagcag
gacaagatggttgccagtagcaacggggagaggaccacagccacatcagaggaccaaccc
acagacctcagtctccctaaattatcaccccacaaacattctcacgcccaatcccacaca
cacactgtcccccaccaccaccacccacaccagcatcccacaatgcatcaggaggtgaag
gccccccttctattccagaccagcagtcctcaggggtctggtggggagtaccacccccgt
gcatgcagggtgccccccatgaccatgaccccccccacccacacccccagacaggcactg
gctgtagaccccaatcccaggacctcagagaggacctcagagaggacctcagagaggacc
tcagagagggcctccaacggccgaggaggggggagaggaggcgaggatgcgagcctgggc
gggggctacaaggtggacgagctgagagggagcagtctctcccccatcctgaacgccaag
gtcagccctcacaacgtgtgcaccgcccggcccctcaagaggatgctggacgagctggag
aaccacgcccccgagaggaagatccgagccgtcacgcccatgcactcctcctcctcgtcc
ccctactcgtcagccacgcctaaggatgggcccagcacgcccactcctccgctgagaaag
gctcgctctcccgagctggacagtgacttgatggtgctgaaacctggcgagcccgtgcat
actcaccccaacgtgcacatcagcggctttctagatggacacaagttcccgcttcactcc
gcccccatcttccctggactttacccaggggcctttgtgtcccatgtccaggacatgtgt
gaaggcctgggctcccccctgccccacggttaccccccacaccccttgcagtacttgaag
aaccaagcggttctttcccccatagtgccgcccttcgccatccattccttcatgatgcag
agacaactattggcgcaggcggccaccagtcccgcccacatgtaccgccacccaatggga
gcttcgtatggtgagctcctgcatcatggactgtaccccatgtccgcccttaaccctcaa
ccagctttcaaccccccccagctctcttcagtacaccccagcactaaactctcctaa
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