Osmerus eperlanus (European smelt): 134031325
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Entry
134031325 CDS
T10927
Name
(RefSeq) calcium-activated potassium channel subunit alpha-1a-like isoform X1
KO
K04936
potassium large conductance calcium-activated channel subfamily M alpha member 1
Organism
oep Osmerus eperlanus (European smelt)
Pathway
oep04270
Vascular smooth muscle contraction
Brite
KEGG Orthology (KO) [BR:
oep00001
]
09150 Organismal Systems
09153 Circulatory system
04270 Vascular smooth muscle contraction
134031325
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
oep04040
]
134031325
Ion channels [BR:
oep04040
]
Voltage-gated cation channels
Potassium channel, calcium- and sodium-activated (KCa/KNa)
134031325
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Gene cluster
GFIT
Motif
Pfam:
Slo-like_RCK
Slowpoke_C
BK_channel_a
Ion_trans
Ion_trans_2
TrkA_N
Motif
Other DBs
NCBI-GeneID:
134031325
NCBI-ProteinID:
XP_062330892
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Position
12:16367253..16429091
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AA seq
1238 aa
AA seq
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MLAIEDGNKSLDIGSRIMPKNRNNFNPDSSSIHISKMHVNIPFSPDVPCDSNGQRMWWAF
LASSMVTFFGGLFIILLWRTLKYLWTVCCHCNAKKKHVQRVHNPLGDGIKRVGDKVTEVA
ASEVGWMTSVKDWAGVMISAQTLTGRVLVVLVFALSIGALVIYFIDSSDPIESCQNFYKD
FTLQIDMAFNIFFLLYFGLRFIAANDKLWFWLEVNSVVDFFTVPPVFVSVYLNRSWLGLR
FLRALRLIQFSEILQFLNILKTSNSIKLVNLCSIFISTWLTAAGFIHLVENSGDPWENFQ
NSQDLSYWECVYLLMVTMSTVGYGDVYAKTTLGRLFMVFFILGGLAMFASYVPEIIELIG
NRKKYGGSYSAVNGRKHIVVCGHITLESVSNFLKDFLHKDRDDVNVEIVFLHNISPNLEL
EALFKRHFTQVEFYQGSVLNPHDLARVKIESADACLILANKYCADPDAEDASNIMRVISI
KNYHPKIRIITQMLQYHNKAHLLNIPSWNWKEGDDAICLAELKLGFIAQSCLAQGLSTML
ANLFSMRSFIKIEEDTWQKYYLEGVANEMYTEYLSSAFVGLSFPMVCELCYVKLKLLLIA
IEYKSDQRESSTLINPGNHVKMQEGTLGFFIASDAKEVKRALFYCKACHDDITDPKRIKK
CGCKRSKNSYNGYIKSMEEDQQSALSPQKKQQRNGGMRNSPNSSPKMMRHDPLLIPGNEQ
IESMDGNVKKYDSTGMFHWCPSKDIEKVMLTRSEAAMTVLSGHVVVCIFGDVKSALVGLR
NLVMPLRASNFHYHELKPIVFVGSLEYLKREWETLHNFPKISILPGTPLSRADLRAVNIN
LCDMCVILSANQNNIDDASLQDKECILASLNIKSMHFDDSIGVLQANSQGFTPPGMDRAS
PDSSPVHGLARQSSITTGANIPIITELAPLAKPGKVLPVISFSQDKSSGNNLQMITELVN
DSNVQFLDQDDDDDPDTELYLTQPFACGTAFAVSVLDSLMSATYFNDNILTLIRTLVTGG
ATPELEGLLAEENALRGGYSTPQTLANRDRCRVAQLALYDGPFADLGDGGCYGDLFCKAL
KTYNMLCFGIYRLRDAHLNQQSQCTKRYVITNPPYAFELVPSDLIFCLMQFDHNAGQSRT
SLSHSSHSSHSSSKKSSSVHSIPTINRSNRAKSRDSRDKQNATRMNRMGQEKSQYTDEQD
SAHQRTGQIKAAHTTNQVSQFRSMSNLIPPIREVEDEC
NT seq
3717 nt
NT seq
+upstream
nt +downstream
nt
atgctagctattgaggatggcaacaaatccctggacatcggtagcagaataatgccgaaa
aacagaaataatttcaatccggactcgtcctctattcacatatccaagatgcacgtgaac
atccctttttctcctgatgttccttgtgatagcaatggccagcgcatgtggtgggcattt
cttgcctcctctatggtcactttctttggaggtctctttatcattctactgtggagaact
ctcaaatacctgtggacggtctgctgccactgtaacgccaaaaaaaagcatgttcagcga
gtccacaatcccttgggtgacggcatcaagcgagtcggtgacaaagtgacggaggtagct
gccagtgaggtgggatggatgacctctgtgaaagactgggccggggtcatgatatcagca
cagacgctgacaggcagagtcctggtggtgcttgtgtttgctctaagcatcggggccctt
gtaatatacttcatcgattcctcagacccaattgagtcctgtcagaatttctacaaagac
ttcacgttacagatcgacatggcgttcaacattttcttcctgttgtactttggtctacgt
ttcatcgcggccaatgacaagctgtggttctggcttgaggtgaactctgtggtggacttc
ttcacggttcctcctgtgtttgtttctgtctacttgaacaggagctggcttggcttgagg
tttttaagagccttaagattgatacagttctcagaaatattacagtttttgaatatatta
aaaacaagcaactccataaaactggtgaacttgtgttccatcttcataagcacgtggcta
acagcagctggattcatacatttggtggagaactcaggagacccttgggaaaacttccag
aattcccaagacctttcctattgggaatgtgtgtacttactcatggtcaccatgtccact
gtaggctatggagacgtttatgcaaaaaccaccctgggtcgtcttttcatggtcttcttc
atcctcggtggtttggccatgtttgcaagctacgtccctgaaatcatagagttaataggc
aaccgcaagaaatatggtggttcctatagtgcggttaatgggagaaagcacatcgtggtc
tgtggtcacataacacttgagagtgtttcgaacttcctgaaagacttcctacacaaggac
agggatgatgtcaatgtagaaattgtttttctccataatatttcccctaatcttgagctg
gaagccttgttcaagcgccacttcacccaagtggagttttaccaaggatctgttctcaac
ccacacgatctggctagagtcaagattgagtcagctgacgcctgtctgattttagccaac
aaatactgcgccgaccctgatgcagaggatgcgtccaatattatgagggtgatatccatc
aagaactaccacccgaagatcagaatcatcactcagatgttgcagtaccataacaaggcc
caccttttaaacattccaagttggaactggaaggagggagacgatgcgatttgtcttgct
gagctgaagctggggttcatcgctcagagctgcctggcgcagggcctgtctaccatgttg
gccaacctgttctccatgaggtcctttatcaagattgaagaggacacatggcagaagtat
tacctggaaggtgtagccaatgagatgtacacagagtatctgtccagtgcctttgtaggc
ttatcctttcccatggtttgcgaactctgctacgtcaagcttaagctgctgctgatagcc
atcgagtacaagtctgatcaaagagaaagcagcaccctcatcaatcctggcaaccatgtt
aaaatgcaggagggaactttggggttctttattgccagtgatgccaaagaagtgaaaagg
gcactattttactgcaaagcttgccatgatgacatcacagaccctaaaaggattaagaaa
tgtggatgcaagagatctaaaaatagctataacggatatatcaaatcaatggaagaggac
cagcagtcggctctgtcgcctcagaagaaacaacaacgcaacggaggcatgagaaactca
cccaactcctcgcccaaaatgatgaggcatgaccctttactcatcccggggaacgagcag
attgagagcatggacgggaacgtgaagaaatacgactccaccgggatgtttcactggtgc
ccgtccaaagacatcgagaaggtcatgttgacccgcagcgaggcggccatgaccgtgctc
agtggccacgtggtcgtctgcatctttggggacgtgaagtctgcgttggtgggcctgcgg
aacctagtgatgccgctccgagccagcaacttccactaccacgaactgaagcccatcgtg
ttcgtgggctccctggagtacctgaagagggagtgggagaccctccacaacttccccaaa
atctccatcttacccggcacaccgttaagccgggcagatctgagagctgtcaacatcaac
ctttgcgacatgtgtgtcatcctgtcagccaatcagaacaacatcgacgatgcgtctctg
caggacaaagaatgcatcttggcgtcgctcaacatcaagtctatgcattttgacgacagc
atcggggtcttgcaggctaattcccaaggtttcacaccacctggaatggacagggcgtcc
ccagacagcagccctgtgcacgggctggcacgccagagctccatcactacaggagccaac
atccccatcatcactgagctggctccgttagccaaaccaggcaaagtactgcctgtgatt
tcattcagtcaggataaaagcagtgggaacaacttacaaatgataactgagctggtgaac
gactccaacgttcagttcttggaccaggatgacgacgacgacccggacacagagctgtac
ctaacacagcccttcgcctgcgggacggcgttcgccgtcagcgtgctggactctttgatg
agtgcgacatacttcaacgataatatcctcaccttgatccggacgctggtcacaggcggg
gccaccccggagctggaggggctgctggcggaggagaacgcgctgcgaggcgggtacagc
acgccacagaccctggccaacagggacaggtgtcgcgtggcacagctggccttgtacgac
gggccctttgcagacttgggggatggtggctgttatggggatttattttgcaaagcatta
aaaacgtacaacatgttatgctttggaatctaccgattaagagacgcgcatctcaaccag
cagagccagtgcactaagcgctatgtgataactaacccaccctacgcgtttgagctggtg
ccctccgacctgatcttctgcctgatgcagttcgaccacaacgcaggccagtccaggacc
agcctgtctcactcctcccattcctctcattcctccagcaaaaagagctcctcagtccac
tccatccccaccatcaaccgttccaaccgggccaaaagcagggactcgcgagacaaacag
aatgcaacaaggatgaatagaatgggccaagaaaagagccagtatacagatgagcaggac
agcgcccaccagagaaccggccagatcaaggctgctcacaccaccaaccaagtcagtcag
ttcagatccatgagcaacctgatcccacccatcagagaggtggaggatgagtgctga
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