KEGG   Osmerus eperlanus (European smelt): 134031384
Entry
134031384         CDS       T10927                                 
Symbol
ift140
Name
(RefSeq) intraflagellar transport protein 140 homolog isoform X1
  KO
K19672  intraflagellar transport protein 140
Organism
oep  Osmerus eperlanus (European smelt)
Brite
KEGG Orthology (KO) [BR:oep00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   03037 Cilium and associated proteins [BR:oep03037]
    134031384 (ift140)
Cilium and associated proteins [BR:oep03037]
 Primary cilia and associated proteins
  Intraflagellar transport (IFT) complex A
   134031384 (ift140)
SSDB
Motif
Pfam: TPR_IF140-IFT172 Beta-prop_IFT140_1st Beta-prop_IFT140_2nd TPR_IF140_C WD40_CDC20-Fz Beta-prop_WDR19_1st Beta-prop_EML_2 WD40_WDHD1_1st ANAPC4_WD40 WD40_Prp19 Beta-prop_HPS5 TPR_IFT80_172 Beta-prop_WDR90_POC16_2nd WDR55 WD40 TPR_COPA_B Beta-prop_WDR75_1st TPR_GEMI5 Beta-prop_CAF1B_HIR1 Beta-prop_WDR35_TULP_N Beta-prop_TEP1_2nd tRNA_int_end_N2 Consortin_N Ctf4_C
Other DBs
NCBI-GeneID: 134031384
NCBI-ProteinID: XP_062330982
LinkDB
Position
12:complement(16029651..16058132)
AA seq 1477 aa
MAVYFDHRIEAPESSGAPSQVAWHSTQPVLAVASNSPTTGGNIDLYLQQGECVSSCHVDR
PFQPTVLAWHPTKPVLALGWETGEVLLLPHPSGEQTSLPTTHTACITLLEWSSSGSRLVT
GDQMGVLAVWKMDARGRLQGGHFVKHEYSKPLTYCIFRPAPPGEDVAMMARAAVSGDESA
LDMFTWRKAGKGVPLKMGPQEGLLFYVSTADGKVHCVDERGRSSSVLSVEGSIQKLFYLE
RRDVLGVVTETLMLSQYTLGPEGGAQELMKVKLSGKSGQTTDIVWTDNGLLITATGEQTI
RLWDLERDDNYVLSLDERLGFEKGELLNCVSYCPGKEILAAGTNRGRIALWKMLVQPNAR
NDSRTQWKLQTPTELEGSISQLQWGSSLSLLAASSESSVQILCEHVMSAHFSQQVAAVQL
TPSQLSLTLFSTTTQLTLRSDMHIRGVCVTKNAVTVWNGKQVTVHEMAGDVLRNTGSFQC
ESQVLAVHDENIYSVEPNRVQVRTPQGTVKQLLAFSEAEGNPVLLSVCQAYLVVGTDTAH
IKVFDLTRREAKAHCSAKNLGEQIPNLGALRSVKCNANGNQVSILVTQVNGRPDNKVYFY
DVEMDTVTYFDFFTGRPPSGISLAEDMERHHSQASELSGRCPVTHCWDESEPRLFVCETA
PVNSSSRHDDTDEVDVLVVTLFCTQEHGLLLQDSFPRSASLQALLALDVPYYYFTCKLLF
RRGAVFLPEPGERDPEVQEVPSSPPSSTSPAQAQALTPPAPQAPHMVSRRALRDFVGLEG
CEKATRDAMLSFSFYLTIGDMDEAFKSIKLIKSEAVWENMARMCVKNRRLDVARVCLGNM
GNARAARALREAESEPELEARVAVLAVQLGMLEDAEKLYKSCQRYDLLNKFYQASGQWQQ
AVETAETQDRIHLRTTYYSYAKYLEAVGDKNTALVYYEKSDTHRFEVPRMLLDDAQSLEI
YVNKTKDKSIYKWWAQYLESQSDMESALRYYEHAQDYLSLVRVHCYLGNIQKASEIANET
GNRAASYHLARQYESQDEIKQSVHFYTRAQAYNNAIRLCKENGVDDQLMNLALLSNPEDM
MEAACYYEEKGTHMDRAVMLYHKAGHFSKALELAFATQQFTALQLIAEDLNENSDPALLA
RCSDFFIKHAQYEKAVELLVAAKKFHEALQLCLDQSLTITEDLAESMTVSRDSKDMSEEA
RKDLLERIADCCMRQGNYHLATKKYTQAGNKIKAMRALLKSGDTEKIVFFAGVSRQKEIY
IMAANYLQSLDWRKDPEIMKNIIGFYTKGRALDLLAGFYEACAQVEIDDYQNYEKALGAL
TEACKCLSKAKGRSQEEQESRMAELQHKINLVKRFVQARRLYEEDAGEAVRLCEALLEEG
DLDAAVRIGDAYGFLVEHHCQKGNFQVAYRKLEELQKMLPSLNISYYVSQGSLEALQRAV
GLPLGRGALADRGDSRDSGGEEDEVEEDETLESHQGD
NT seq 4434 nt   +upstreamnt  +downstreamnt
atggcggtgtactttgatcaccgtattgaggcccctgagtctagcggggccccttcccag
gtagcatggcactccacccagcctgtactggctgtggcatccaacagccccaccaccgga
ggtaacatagacctctatcttcaacagggggagtgtgtgagcagctgccatgtggaccgt
ccctttcagcccacggtgctggcctggcaccccaccaagcctgtgctggcgctgggctgg
gagacgggcgaggtgctgctgctgcctcacccctcaggggagcagacgtccctgcccacc
acacacaccgcctgcatcaccctgctggagtggagcagctctggcagtcgcctggtcact
ggggatcagatgggagttctagcggtctggaagatggacgccagaggacgactgcaggga
ggtcattttgtgaagcacgaatacagcaaacctttaacctactgcatcttcagaccagct
ccaccaggagaggatgtggcgatgatggcgagagcggcggtgagcggggatgagagtgct
ctggacatgttcacctggaggaaggctgggaagggggtccccctcaagatgggcccccag
gagggactgctgttctacgtcagcacggccgatggcaaggtgcactgtgtggacgagcga
ggccggagcagctctgtcctcagtgtggaaggttccatccagaagctcttctatttggag
aggagggatgttctgggggttgtcacggagacactgatgctgtcgcagtacactctggga
cctgaggggggagcccaagagctgatgaaggtcaagctaagtggaaaaagtggtcaaacc
acagacatcgtctggacagacaatggactgcttatcacagcaacaggagagcagacaatc
aggctttgggacctggagagggatgataactacgtcctctctctggatgaacgtctgggc
tttgagaaaggagagctgctcaactgtgtctcctactgtccaggcaaagagatcctagct
gcaggcacaaaccgtgggcgtattgctctgtggaagatgctggtccagcccaatgcacgg
aacgacagcaggacccagtggaaactgcagacgcccactgagctggagggcagcatcagc
cagctgcagtggggttccagcctgagcttgctggctgccagcagtgagagctcagttcag
atcctgtgtgaacatgtgatgtcggcccacttcagccagcaggtggcggcggtgcagctc
accccgtcccagctcagcctgaccctgttcagcacgaccacacagctcaccctgcgctca
gacatgcacatcaggggcgtctgcgtcaccaagaacgccgtcaccgtgtggaacgggaaa
caggtgaccgtccacgagatggccggagatgtcctgcgcaacacagggtctttccagtgt
gagtcccaggtcttggccgtgcacgatgagaacatctactctgtggagcccaacagggtg
caggtccgcacccctcagggaacagtcaagcagctgttggctttctctgaggcggagggc
aaccctgtcctgctcagtgtgtgccaggcctacctggtggttggcacggacaccgcccac
atcaaagtcttcgatctgacccgcagggaagcgaaggctcactgcagtgccaagaacctg
ggggagcagatccccaacctgggggcactgcgctccgtcaagtgtaacgccaacggcaac
caagtcagcattctagtcacacaggtgaatgggagaccagacaacaaggtgtacttctat
gacgtggagatggacactgtcacatactttgactttttcactggcaggccaccaagtggg
atctccctggctgaagacatggagagacatcactcccaggcctcggagctgagtggccgg
tgtcccgtgactcactgctgggacgagagcgagccccgcctgtttgtgtgtgagacggct
cctgtgaacagctcctctcgccatgacgacacagacgaggtggatgtgctggtggtgacg
ctcttctgcacccaggaacatgggctcctcctgcaggactccttccccaggtctgccagc
ctgcaggccctgctggccctggacgtgccctactactacttcacatgcaagctgttgttt
cggaggggtgctgtctttctaccggagcctggtgagagagatccagaggtgcaggaagtc
ccttcctcgcccccctcctccacctccccagcccaggcccaggccctgacccccccggcc
ccccaggccccccacatggtgtccagacgagccctccgggactttgtgggcctggagggc
tgtgagaaggccacccgcgacgccatgctcagcttcagcttctacctgaccatcggggac
atggatgaggccttcaaatccatcaagctcatcaaaagcgaggcggtgtgggagaacatg
gccaggatgtgtgtgaagaaccggcgcctggacgtggcgcgggtgtgcctggggaacatg
ggcaacgccagggcggcgcgggcgctgcgggaggcggagtcagagccggagctggaggcc
agggtggcagtgctcgccgtgcagctgggcatgctggaggatgcagagaaactgtacaag
agctgccagcgctacgacctcctcaacaagttctaccaggcgtctggccagtggcagcag
gcggtggagacggccgagacgcaggaccgcatccacctgcgcaccacctactacagctac
gccaagtacctggaggccgtgggagacaagaacacggcgctcgtctactatgagaagtca
gacactcacaggttcgaggtgccccgcatgctcctggatgacgcgcagtcgctggagatc
tacgtcaacaagaccaaggacaagagcatctataagtggtgggcccagtacctggagagc
caatcagacatggagtcagcgctgcgctactacgagcacgcccaggactacctctctctg
gtccgcgtgcactgctacctggggaacattcagaaggcgtccgagatagccaatgagacg
gggaaccgggcggcgtcgtaccacctggcccgtcagtatgagagtcaggatgagatcaaa
cagtccgtccacttctacacacgagcacaggcctacaacaacgccatccgcctgtgcaag
gagaacggtgtggacgaccagctcatgaacctggccctcctcagtaaccctgaggacatg
atggaggccgcctgctactacgaggagaagggcactcacatggaccgtgccgtcatgctc
taccacaaggctggccacttctccaaggcgctcgagctggccttcgctacccagcagttc
acagccctgcagctcatcgctgaggacctgaatgaaaactctgaccccgccctgctggca
cgctgctccgacttctttatcaaacacgcccagtacgagaaggcagtggagctcctggtg
gctgccaagaagtttcacgaggccctgcagctgtgtttggaccagagcctgaccatcaca
gaggacctggctgagagcatgaccgtgtcacgggactccaaagacatgtccgaggaggcc
cgcaaggacctgctggagaggatagcagactgctgcatgcgccagggaaactaccacctg
gccaccaagaaatacacacaggccggcaacaagataaaggccatgcgggctctgctgaag
tcaggtgacacagagaagattgtcttcttcgccggcgtgtcgcgtcagaaggagatctac
atcatggctgccaactacctgcagtctctggactggcggaaggatccggaaatcatgaag
aacatcatagggttttacactaaaggcagggcccttgacctgctggctggcttctatgaa
gcctgtgcccaggtggagatcgatgactaccagaactatgaaaaggccctgggcgctctg
acggaagcctgcaagtgcctgtccaaagccaagggccgcagccaggaggagcaggagagc
cgcatggctgagctccagcacaagatcaacctggtcaagaggttcgtccaggcacgcagg
ctgtatgaggaggatgctggtgaggcggtgaggctgtgcgaggccctgctggaagaggga
gacctggacgctgcggtcaggataggagacgcctatggcttcctggtggaacaccactgt
cagaagggcaacttccaggtggcctaccgcaaactggaggagctccagaagatgctgccg
tctctgaacatcagctactatgtgagccagggcagcctggaggccctgcagagagcggtg
ggcctacccctggggagaggggcgctggccgaccggggagacagcagggatagtgggggt
gaggaggacgaggtggaggaggatgagaccctggagtcacaccaaggggactga

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