Osmerus eperlanus (European smelt): 134031485
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Entry
134031485 CDS
T10927
Name
(RefSeq) rho GTPase-activating protein 23-like isoform X1
KO
K20315
Rho GTPase-activating protein 21/23
Organism
oep Osmerus eperlanus (European smelt)
Brite
KEGG Orthology (KO) [BR:
oep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oep04131
]
134031485
Membrane trafficking [BR:
oep04131
]
Endosome - Golgi transport
Others
Others
134031485
Others
Rho GTPase associated proteins
Rho GTPase-activating proteins
134031485
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGAP
PH
PDZ_6
PH_9
PDZ
PDZ_2
PH_11
Motif
Other DBs
NCBI-GeneID:
134031485
NCBI-ProteinID:
XP_062331101
LinkDB
All DBs
Position
12:206240..288554
Genome browser
AA seq
1635 aa
AA seq
DB search
MLRGDVPAPPGWNWCFPCSVGVDCSDPEPRCIWLAVLQRVSQDNTPHSYPPASSLVSHHQ
SVPRRTIPSSGLARAKGLRDGMVSSNENVHPQLLGEVEGVSRQGPRTVVLQKSQQGFGFT
LRHFILYPPSLQTHKDEENGNGTGKASLRPGLEPMDTIFVKSVRDRGPAQQAGLCTGDRL
VKVNGESVLGKTYSQVITLIQNSGNVLELSIMPKDEDVMQLVSAYSQDANLQGIKPYSGR
PQNLPEPPPLCYSRSKPTPPIALPTHIPLDNWHCRPVSQAFPLDNCSSTSTLTSGWPGGP
EEHKQKNGVQFVSAQNPSYGHNRGRSLSTLSALDFHFANHNAAIASATLPHVLPRKSSLP
ASRAQADARCHQALSDWYYSQAEAADMSPRHRSISQDRLAELGLALGSASSADQRSWRVS
QETIQCHQQAAAPSHNSYWLEGWGMVGPGSRSCSEGLLAAHAEYEHSYGRSVDTLAQAAA
LVSPHGDQTSAWLSQTGQPDTRAVEVKKQQGLGNQQKNLKTTVTSSMVISATVSAVGRQH
QQMAEPQTRRMEGKESVDYKSYSPLCPPKAGHFLQQDHSFREPTYGSHFNWSPCNQTSPS
DSELGLVVVPRPQSTPALFSTEDDKLTLEQDREALSPLAFNQEIIFRQKPPSGCRIPIHT
LQHPHYAVSVDSAEPPAALSSPVSGGSRPGDSLRKANGNLPPDNSLASIPFIDEATSPNA
DSACHVPACSLVSSSAQCPSVLASVPTLLTSNMVSPILSNSSPVRLRTRDCSSIKGRRSS
YLLAITTERSKSCDEGLNSFWEEGRVFSRLPKRVKSFFTDGSLESLRVAEEVRSKRHSTS
ELGTITFSNVRKEGWLHYKQILTEKGKKVGGGMRPWKRVFSVLRSHSLFLYKDKREAVLH
GAGAGPSHTEDEHPPISIRGCLIDIAYSETKRKHTLRLTTQDFCEYLLQAEDRDDMLGWI
RVIRENSKTDNEELGFSRQALISKKLNDYRKQSPTGNKPDASPKTHRRMPPFLLTKTDNT
SSHRYSKTDEIKTHWGINIMKKAKKTGNPKVFGVRLEDCQPAHNNTFVPLIVEMCCGMVE
TMGLEYTGIYRVPGNNAMVSSLQEQLNKGMEIITTEERWQDLNVISSLLKSFFRKLPEPL
FTDAKYSNFIDANRLEDAEDRLKTMRKLIHDLPRHYHHTLRFLVGHLKTVADYSDKNKME
PRNLALVFGPTLVRTSEDNMTDMVTHMPDRYKIIETLILHHDWFFNAGALDRDEKAPVDK
RDMLPVPNIDHLLSNIGRTGVLGETSVSTTSDSVKSKVSLDIKKDLSARDFLPSLIFTAT
RKRKKCPSTHQLGSSSGEDSEHEPIKASNYGGEEEKKGKDQEQEHVSEGLNRPRIENNGE
TEVNKGKKRIEEKQSLFRGSGVTVEREKERPARNIVRRDEGGLSTKIPQPCPNSFLYSHC
QSPNIITSTTQMRPQEELTALPLLNVPSLAKACSVFPSWLSHLRLPSLSQASSLQRAPQT
QWDQTLPVRYRKKRGIRVRAVSMNLEMELGKDEDGLKSRRGERVELLRSPVKEQCQHGSP
VEASQRATVHPVTVPDSTLSALAPGPLLTIGPPSLSHSSAGRTDQDPLYPSTIVLRKTTL
EAHKRKAWRRHTVVV
NT seq
4908 nt
NT seq
+upstream
nt +downstream
nt
atgttgagaggagatgtcccagccccgccagggtggaactggtgtttcccgtgttcggtg
ggggtggactgcagtgacccagagccacgttgtatctggttggcagtgttacaaagggtt
tcacaagacaacacaccacactcctacccccctgcatcttccctcgtttcccatcatcag
agcgtgcccaggaggaccataccgagtagtggcctggccagggcaaaagggctgagagat
ggtatggtgtcatccaatgagaatgtccatccacagttgctgggtgaggttgagggtgtg
tcaaggcagggccctcggaccgtggtgctccagaagagtcagcagggattcggcttcaca
ctgcgccacttcattctctacccaccgtctctccagacacacaaagatgaggaaaatgga
aatggaactggaaaagccagcctgagacctggtctggagcccatggacaccatctttgtg
aagagtgtgagggacagaggcccagcccaacaggctggcctgtgtacaggggacagactg
gtgaaggttaatggagagagtgttctggggaagacctactctcaggtgataacactaatc
caaaacagtggaaatgttctggaactatccatcatgccaaaagatgaggatgtgatgcag
ttggtgagtgcgtactctcaggatgccaacctacaagggatcaagccatattcaggcagg
ccacagaaccttccagaaccgccacctctctgttactctcgatccaagcccacccctcct
atcgccttacccacccacatcccgctggacaactggcactgccgccctgttagccaagcc
ttccccctggacaactgctctagcacatctacattgacctctggctggcccgggggtcct
gaagagcacaagcagaagaatggcgtccaatttgtctctgcacaaaatccatcttacggt
cataatcgtggtcgttcattatcaacgctaagtgctctggattttcattttgccaaccac
aatgctgccattgcctcagcaacgctgcctcatgtgctgccacgcaaaagcagcctgcca
gcttcacgtgcacaagcagatgccaggtgccatcaggccctgtcggactggtactacagc
caggcagaagcagcagacatgtcccctcgccatcgaagtatatctcaggatcggttagct
gagctggggctggcgcttggctctgcttcctcagctgatcagagaagctggagagtttcc
caagaaactattcaatgtcatcagcaggcagctgccccctcccacaactcctattggctt
gaaggctggggcatggtgggaccgggaagtcgttcctgctcagagggcctgttagcagcg
catgctgaatatgagcacagctacggtcgctcagtggacacactagctcaggctgctgcg
ctggtctccccccatggtgaccaaacctccgcctggctttcacaaactggccaaccagat
acaagagctgttgaggtaaaaaagcagcaaggtttaggaaaccagcagaaaaatttaaaa
actacagtcacatcatcaatggttatttctgccacagtctctgctgttgggcggcagcac
caacagatggctgaaccacaaaccagaagaatggaagggaaagaatcagtagactacaaa
agctacagcccattgtgccctcccaaagctggtcattttttacaacaagaccattctttt
agggagcccacctacggctctcatttcaactggagcccttgtaaccaaaccagtccctcg
gacagcgaattaggattggtggttgtacctcgtccccaatccactcctgctctcttttcg
actgaggatgacaagcttacacttgaacaagacagggaggccctctcaccacttgcattc
aaccaagagatcatcttcaggcagaagccaccgtcgggttgtcggatccccatccacact
ctacaacatcctcattatgctgtcagcgtggactctgctgagcctcccgcagcactgtcc
tctcctgtctctgggggttcaaggccaggggatagtttacgaaaggctaatggtaacctg
cctcctgacaactccctggcttccattcctttcatagatgaggccacaagccctaatgct
gacagtgcctgccatgtgcctgcctgcagtttggtgtcctccagtgcccagtgcccctct
gttctcgcttctgtgcccaccctcctcacttctaatatggtgtcccctatcctctccaac
tcctcccctgtccgactccgcaccagggactgcagcagtatcaagggacgccgttcctcc
tacttgctggccatcacaactgaacgatccaagtcatgtgacgagggtctcaatagcttc
tgggaagaagggcgtgttttctcacgactaccaaaaagggtcaagagctttttcactgat
gggtctctagagagtttgcgagttgcagaggaggtgcggtccaaacgccactccacctct
gagttgggcactatcactttcagtaatgtccgcaaggagggctggctgcactacaaacag
atccttaccgaaaagggaaagaaggtgggtggaggcatgcgtccatggaaacgtgtcttt
tctgtgctacgctcccattcactgttcctctacaaagacaaacgtgaggcggtccttcat
ggggcaggggcaggccccagccacacagaagatgagcatccaccaatcagtattcggggc
tgtttgattgacattgcttatagtgaaactaagcgtaagcacacgctgaggctgaccact
caggacttctgtgagtacctgctgcaagcagaggaccgagatgacatgctgggctggatc
agagtcatccgggagaacagcaagacggacaatgaagaactgggtttctccagacaagct
ctcatcagcaagaaactcaatgattacaggaaacaaagtccaacaggcaataagccagat
gcctctcccaagacccatcgcaggatgccaccttttctcttgaccaagacagacaacaca
tcttcgcaccgttattccaaaactgatgaaattaagacacattgggggattaacatcatg
aagaaggcaaagaagacagggaatcccaaggtgtttggagtgcgactggaggactgtcaa
cctgctcacaacaacacgtttgtccctttgatagtggagatgtgctgtggtatggtggaa
accatgggtttagagtacactggcatctacagggtaccaggcaacaatgccatggtgtcc
agccttcaggagcaactcaataaggggatggagatcatcaccaccgaagagagatggcag
gacttaaatgtcataagtagcctgctgaagtccttcttcaggaaacttccagaacccttg
ttcacagatgccaaatacagtaacttcatcgatgccaatcggctagaagatgcagaggac
agacttaagaccatgaggaaactgatccatgatctaccaaggcactatcaccacaccctc
aggtttttggttggccatctgaaaacagtagctgattattctgacaaaaataagatggag
cctagaaatctggctctagtgtttggtcccactctggttagaacatcagaagataacatg
actgacatggtcacccacatgccagaccggtacaagatcattgagacactcatcttacat
catgactggttcttcaatgctggagcactggatagagatgagaaggccccagtggataag
agagacatgctgcctgttccaaatattgaccacttactttccaacatcggtaggacaggt
gtgcttggggaaacctcagtttccaccaccagcgattcagttaaatcaaaggtctcattg
gacatcaagaaggacctgagtgccagagacttccttccatcactcatctttacagccacc
cggaaacgcaagaaatgtcccagtacccatcaattgggaagcagctctggtgaggactct
gagcacgagccaatcaaagcaagcaactatgggggagaggaagaaaagaagggaaaggac
caagagcaagagcatgtgtctgaaggactgaaccgtcctagaatagaaaataatggggaa
acagaagtgaataagggtaaaaagaggatagaggagaaacaatccctgtttaggggaagt
ggggtgacagtggaaagagagaaagaaagacctgcaagaaatattgtgcgtcgggatgaa
ggggggttatccactaaaataccccagccttgtcctaatagcttcctatactcacactgt
cagtcccccaacatcatcaccagcaccacacaaatgaggccccaagaggagctcactgcc
ctgcccctcttaaatgtcccaagcctggccaaagcatgctcagttttcccctcctggctc
tcccatctcagactgcctagcctcagccaagcttcaagtcttcaaagagcaccgcagacc
cagtgggaccagacactgccagtgcgttataggaaaaaaagaggaataagagtgagggct
gtgtccatgaatttagagatggaacttggcaaggatgaggatggattaaaaagtagaaga
ggagaaagggttgagttactaagatcaccagtgaaagagcagtgtcagcacggcagccca
gtggaggcttctcagcgggccacagtccacccagttacagttcccgacagcacactgtca
gccttggctcctggccctctcttgacgatagggcctccctctctctcccactcttcagct
ggacggacagatcaggatcccctctatccttccaccatagtactacggaaaacaacctta
gaggctcataagaggaaggcatggcgccgtcacacagtggtagtttaa
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