Osmerus eperlanus (European smelt): 134031514
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Entry
134031514 CDS
T10927
Symbol
lrrc4bb
Name
(RefSeq) leucine-rich repeat-containing protein 4B
KO
K16360
netrin-G3 ligand
Organism
oep Osmerus eperlanus (European smelt)
Pathway
oep04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
oep00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
134031514 (lrrc4bb)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
oep04515
]
134031514 (lrrc4bb)
Cell adhesion molecules [BR:
oep04515
]
Immunoglobulin superfamily
NGL family
134031514 (lrrc4bb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
I-set
Ig_3
LRR_1
ig
LRR_14
LRR_9
V-set
Ig_2
LRRNT
DUF7617
Big_6
Ig_6
Motif
Other DBs
NCBI-GeneID:
134031514
NCBI-ProteinID:
XP_062331171
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All DBs
Position
12:complement(15556277..15566871)
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AA seq
743 aa
AA seq
DB search
MRVVMVTSPSSPSPLLWLVQFLLWFHHHGPQLTEAAPPCPSPCTCSNQASRVICTRKSLD
GVPESISENTRYLNLQENTIQVIKSETFKHLRHLEILQLSKNHIRQIEVGAFNGLPNLNT
LELFDNRLTVVPSQAFEYLSKLRELWLRNNPIETLPAFAFNRVPSLRRLDLGELRKLDYI
SEAAFEGLVNLRFLNLGMCGLKDIPNLTPLVRLEELELSGNQLGIVRPGSFQGLVSLRKL
WLMHSRVTVIERNAFDDLKNLEELNLSHNSLHSLPHDLFTPLHVLERVHLNHNPWVCNCD
VLWLSWWLKETVPSNTTCCARCHAPPGLKGRYIGELDQSHFTCYAPVIVEPPTDLNVTEG
MAAELKCRTGTSMTSVNWLTPNGTLMTHGSYRVRISVLHDGTLNFTNVTVQDTGQYTCMV
TNSAGNTTATAVLNVSATDPSNSYSYFTTVTVETVETVQEENSARQYINETFIEFPGPTM
PGGVLGEGRSGVTISPSLSSLSSLSPRATRGTEKAVTVSIMNVPNIPGLDDVMKTTKIII
GCFVAITFMAAVMLVVFYKLRKQHQLHKHHGPARAIEIINVEDEIGAGAGSGISGGSTMN
SGCGGEGTLRIHHPEIVNLPNIGRSDHLNHYYKAHHFNNNVMGLSIGSGEGAGSGGILNN
KNPSQINQQGQEIPISCTQVPISTSGNGINLSSVSPPLPMSLPMPTMGIHGSLKGFMGQN
PNPQMEPLLFKGNSKENVQETQI
NT seq
2232 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgttgtcatggtgaccagcccctcttccccctcccccctcctctggttggtccag
tttttgttgtggttccaccaccatggacctcagctgacagaggctgcgcccccatgccct
agcccctgtacctgctccaatcaggccagccgtgtcatttgtacaagaaagagtttagat
ggggtaccagaaagcatttctgagaacacgagatacctcaacctacaagagaacacaatt
caggtgataaagtctgaaacctttaagcacctgaggcatttggaaatcctgcagctctcc
aagaaccatatccgacagatagaggtgggggcattcaatggcctccccaacctcaacacg
ctggagctctttgacaaccgtctcacagtggtgccatcccaggcctttgagtatctcagc
aagctaagggagctatggctacggaacaaccccatcgagaccctgccagccttcgccttt
aaccgcgttccttcgttgcgccgccttgatctcggagagctgcgcaagctggactacatc
tccgaggccgccttcgagggattggtcaacttgcgtttcctgaacctgggcatgtgcggg
ctgaaggacatccccaacctcacccccttggttcgactggaggagctggagctgtccgga
aaccagctgggaatcgtgcgacccggctccttccagggtctggtgtccctccgcaagctg
tggctcatgcactccagggtgacggtgatcgagcgcaacgccttcgacgacctcaagaat
ctggaggagctcaacctgtcccacaactccctgcacagcctgccacacgacctcttcacc
cccttgcacgtgttggagagggtccacctcaaccacaacccctgggtgtgcaactgcgac
gtgctgtggctcagttggtggctgaaggagacggtgcccagcaacaccacctgctgcgcc
cgctgccacgcccctccgggcttgaagggccgctacatcggcgagctggaccagagccac
ttcacctgctacgcccccgtcatcgtggagccgcccaccgacctcaacgtcaccgagggc
atggcggccgagctgaaatgtcgcaccgggacctcgatgacctctgtcaattggctcacc
ccgaacggtaccctcatgacacacgggtcataccgagtccgcatctcggttctgcatgac
ggaaccctgaacttcaccaacgtgaccgtccaggacaccggccaatacacctgcatggtg
accaactccgccggtaacaccacggcaaccgccgtcctcaacgtgtccgccactgatccc
agcaacagctacagctacttcactaccgtcaccgtggaaaccgtggaaacggtacaggag
gaaaattcagccagacagtacatcaacgagactttcatcgaatttccaggtcctacaatg
ccaggaggggtactgggcgagggtaggtctggtgtcaccatatcgccctccctctcctca
ctctcctccttgtctccacgagccactagaggcaccgagaaagcagtgactgtgtccatt
atgaacgttccaaacatacctggcctggatgatgtcatgaagaccaccaagatcatcatc
ggctgcttcgtggccatcacgttcatggcagccgtgatgctggtggtcttctacaagctg
aggaagcagcatcagctgcacaaacaccacggccccgcccgagccatcgagatcatcaat
gtggaggatgagattggagccggggcaggaagtggaatctcagggggttctactatgaat
tccggctgcgggggagaaggaaccttgaggatacatcacccggagatagtcaaccttcct
aacatcggtcgatcggatcatctcaaccactactataaagcccatcatttcaacaacaac
gtaatgggtctgagtattggatccggggaaggagctggatcggggggtatccttaacaat
aagaatccatctcaaatcaaccagcaaggtcaagaaatccccatctcttgtactcaagtg
cccatctccacatctggcaatggcatcaacctcagttctgtgtctccacccctgccaatg
tccctcccgatgcccactatgggaatacatggatctctcaagggtttcatgggccagaac
cccaatccacaaatggagcctcttcttttcaaaggaaactcaaaggaaaacgttcaagag
actcaaatctaa
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