Osmerus eperlanus (European smelt): 134031574
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Entry
134031574 CDS
T10927
Symbol
mms19
Name
(RefSeq) MMS19 nucleotide excision repair protein homolog
KO
K15075
DNA repair/transcription protein MET18/MMS19
Organism
oep Osmerus eperlanus (European smelt)
Brite
KEGG Orthology (KO) [BR:
oep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
oep03036
]
134031574 (mms19)
03400 DNA repair and recombination proteins [BR:
oep03400
]
134031574 (mms19)
Chromosome and associated proteins [BR:
oep03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
134031574 (mms19)
DNA repair and recombination proteins [BR:
oep03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
Other NER factors
134031574 (mms19)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MMS19_C
MMS19_N
TOR1L1_N
HEAT_GCN1
TPR_DNAAF5
TPR_IMB1
Adaptin_N
Motif
Other DBs
NCBI-GeneID:
134031574
NCBI-ProteinID:
XP_062331257
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All DBs
Position
12:complement(13484688..13494034)
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AA seq
1042 aa
AA seq
DB search
MQFEPPPPRLFMMAADSALLVGLVEEFVSGQQDSKAADTATGIKAGKFTILQLVEALGLS
LTSSQPQTRARAVQLLSQVLQECYADLSEQEVEVLIAFYENRLKDHYVITPHALQGLKAL
TKCTVLPPGSAVSMLKSLFQDVHVQSLMLAERAHVYNMLINLMGSREEELKGLGADFVFG
FVQSMDGERDPRNLLLAFQIARNIIHRNYDMGKFTEELFEVTSCYFPIDFSPPPNDPHGI
TKEELILTLRAVLTGTPSFAEFLLPLIIEKLDSDVQSAKLDSLQTLSACASVYEYKDLAE
FLPGLWASLRREVFQTASERVESTGLSALSALTSCLSRSVLNSDSEDSLNVFLDQVIKDC
EHHLSEPDLKLVWPSAKLLQAASSASYRASYRVAAAVMPSLIEQYNNRTQCAHRRTLLEV
LQGFVQPSKIGQSNMEDESVLSDFRASLCSVVFSALTESNAGLQVTATRVLTALAQHTGL
LQQADVEQAVAHLTRLVLEEADATVSVAVLDCAGSLAKLHPAAFITNMVPHLKDQIFTEP
MALGDGSTLFQEPSQHAVRQRCVSALAAVSSQPSVVQESTPVLLQVLSSAHTGCGCFSSE
EVVSVCHSLQSIAEQAQDTEETSHIFHDIIIPRLLGLALQAALQGEGHAGPRSPLVEESI
ISAMVPVISTTCARLQPTLASQTASRAVSLFLDGDVSFLPDKAFPDHIQLLKKQSQYWSQ
SQMVCLLMACVCSLPRSVEVPQMDRLLAELEELSCSNSHPLSYTSAAKCYAGLVNKAPPG
DSLESLIERTMKRVCSELDSPSSPQLTQALTLLLWVAKALLLRYHPLSTTLTDKLFSLLS
DSELGTSAADGFSLLMSDSVDVLNRGCHADVRIMYRQRFFTENSAKLVQGFNSAPPEKKS
CYLKALSHIVNNLPRQVQLSELPALLPLLLEALSCPDQGVQLSTLSCLQPVLLDPPSALI
TQLEALVSRLLALTSSPAMKVRIASLRCVHAVSRFPEHEVMPFRTRVLRALAAPLGDNKR
LVRSEAVKARGEWFLLGSPGGR
NT seq
3129 nt
NT seq
+upstream
nt +downstream
nt
atgcagtttgaaccaccaccaccaaggctgttcatgatggctgcggacagtgccttgtta
gtgggcttggtagaagaatttgtatcgggacaacaggacagcaaggcagcagacacagcc
acagggatcaaagctgggaagttcacaatactacagttggtggaagcattgggactaagt
ctgaccagctcccagccccagacacgagcacgagcagtccagctcctctcccaggtcctg
caggagtgctatgcagacctctcagagcaggaagtggaggttcttatagccttctacgag
aatagactgaaggaccactatgtcatcacaccgcatgccctacagggactgaaagcactg
accaaatgtacagtgctgcctcccgggtctgcagtgtctatgctgaagtccctgtttcag
gacgttcatgtgcagtctctgatgctggctgagagagctcatgtctacaacatgcttatc
aacctcatgggatccagagaagaagagttgaaaggtttgggggcagactttgtatttgga
ttcgtccaatcaatggatggggaaagggacccacgtaacctcctgctagcctttcagatt
gcccggaatatcatccacaggaattacgatatgggtaaattcacagaggagctgtttgaa
gtgacgtcctgctacttccccattgacttcagccctcctcccaacgacccccatggtatc
accaaggaggagctgattttgaccttgagggcggtgctgaccgggacccccagctttgca
gagttcctgttgcccctgatcatcgagaagctggactcggacgttcagagtgccaaactg
gactccttacagactctgagcgcctgtgcgtctgtgtatgaatataaggatctggcagag
ttcctcccagggctgtgggcctcgctacgcagagaggtgttccagacagccagtgagaga
gtggagtccaccggcctatcggctctcagtgctctgacctcctgtctgtctcgctccgtc
ctcaactctgactcggaagactccctcaatgtctttctggaccaggtcatcaaagattgc
gagcaccacctgagtgagccggacctcaagctggtgtggcccagtgccaagctgctgcag
gctgcctctagcgcctcctacagggccagctacagggtggccgccgccgtcatgccctcc
ctcatcgagcagtacaacaaccgcacccagtgcgctcataggcgcaccctgctagaggtg
ctacagggctttgtccagccgtccaagattggccagtcaaacatggaagatgagagtgta
ctgagtgacttccgtgcgtctctctgcagtgtagtgttctcagcgctgacagagagcaac
gcagggctccaggtcacggccacacgcgtgctcactgcactggcccagcacacaggtctg
ttgcagcaggcggacgtggagcaggctgtagctcacctgaccaggcttgttctggaggaa
gctgatgccacagtcagtgtagctgtgctggactgtgcaggatccttagccaagctacac
cctgctgccttcatcaccaacatggtgcctcatctaaaggaccagatatttacagagccc
atggccctaggtgatggctccactctgttccaggagccatcccagcatgcagtgcgtcag
cggtgtgtctcagcgctggcagcggtgtcgtctcagcccagtgtggtccaggagagcacc
ccagtcctgctgcaggttctaagctccgcacacacaggctgtggctgtttctcgtcagag
gaggtggtgtctgtgtgtcacagtctgcagagcatagcagagcaggcacaggacacagag
gagaccagtcacatcttccatgacatcatcattccgcgcctgctgggactggccttgcaa
gcagccctgcaaggtgaagggcatgctggtcctcgtagtcctctggtggaggagtctatt
atttcagcaatggtccctgtcattagcaccacctgtgccaggctacagcccacactggcc
agtcagactgcgtccagggcagtatctctcttcctggatggggacgtctccttcctgcct
gacaaagcctttcctgaccacatccagctcctcaagaaacagagccagtattggagccag
tcccagatggtgtgtctactcatggcctgtgtctgctctctgcccaggagtgtggaggtg
ccccagatggacagactgctggctgagctggaggagctgagctgtagcaacagtcaccct
ctgtcttacacctctgctgccaagtgctacgcgggcctagtcaacaaagcccccccaggt
gactccctggagtcgttgatagagaggaccatgaagagagtgtgttcagagctggactcc
ccctcctctcctcagctcacccaggctctcactctgctgctgtgggtggccaaggctctg
ctgctgagataccaccctctgtcaaccaccctgacggacaagctcttctccctgctcagt
gactctgagctggggacctcggcggccgacggcttctctctcctcatgagtgactcggtg
gacgttctgaaccgcgggtgccacgcggacgtgcgcatcatgtaccgccagcgcttcttc
accgagaactctgccaagctggtccagggcttcaactctgccccaccagagaagaagtct
tgctatctgaaggctctgtcccacatcgtcaacaacctgcccagacaggtccagctctca
gagcttcctgcgctcctgcccctgctgctggaggccctgtcgtgtcctgaccagggcgtc
cagctgtccaccctgtcctgcctgcagcctgtcctcctcgaccccccctctgccctgatc
acccagctggaggctctggtctcacgcctgctggccctcacctccagcccggccatgaaa
gtgcgtatcgcctcactgcggtgtgtccatgccgtctcccgcttccccgaacacgaggtg
atgccattccgtaccagggtgcttcgtgccctcgctgccccccttggtgacaataagagg
ctggtcagaagcgaggctgtgaaggcccgtggagagtggttcttactgggaagtccaggg
ggcaggtga
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