Osmerus eperlanus (European smelt): 134031627
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Entry
134031627 CDS
T10927
Symbol
epas1a
Name
(RefSeq) hypoxia-inducible factor 1-alpha
KO
K08268
hypoxia-inducible factor 1 alpha
Organism
oep Osmerus eperlanus (European smelt)
Pathway
oep04137
Mitophagy - animal
oep04140
Autophagy - animal
oep04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
oep00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
134031627 (epas1a)
04137 Mitophagy - animal
134031627 (epas1a)
04148 Efferocytosis
134031627 (epas1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oep03000
]
134031627 (epas1a)
Transcription factors [BR:
oep03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
134031627 (epas1a)
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Gene cluster
GFIT
Motif
Pfam:
PAS_11
PAS_3
bHLH_HIF1A
PAS
PAS_4
PAS_9
HLH
Prion_octapep
Motif
Other DBs
NCBI-GeneID:
134031627
NCBI-ProteinID:
XP_062331319
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Position
12:complement(2469483..2480943)
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AA seq
715 aa
AA seq
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MTADKDKRRALSKEAARVRRRAESEVFCDLKRLLPLPATVRTPLDKPSIIRLTISYLRTH
TLLTGSGVSQVSQSRVEEQRRGLGETTGDRQTGGSWGSPPGRGWGETDLYLQVLGGFFII
VTTEGHMIYLSENVSQHMGLTQVELMGHSMFEFSHPCDHEDIKDKLCSASDEWWPSRRRN
FLMRMKSTITHSGRITNLKSACWKVLHCQGCVKVCVFPSPLTCLLILCQPLPLSHTLVHT
HSFTSQHSMDLRFLHCDQRVGELLGYCPEELLGHSVYELCHTMDQHSLSRSHRNLCSKGQ
TVSGLYRLLVKRGGYVWAESHSAVISSPRLSKTNYSSHQPPCVLSVTYILSGVEEPSLLL
SLDQALYLETGVESGPTAPADLETGVESGPTAPADLETGVESGPGAADLETGVESGPAAA
DLETGVESGPGAADLETGVKSGPAAPADLETGVESGPTAPADLETGVESGPTAPADLETG
VESGPTAPADLETGVESGPTAPADLETGVESGPTAPADLETGVESGPTAPADLETGVESG
PAAADLETGVESGPAAPADLETGIESGPAAPADLETGVESGPAAPADLETGVESGPAAPA
DLETGVESGPAAPADLETGVESGPAAPADLETGVESGPAAPADLETGVESGPGAADLETG
VESGPGAADLETGVESGPAAADLETGVESGPAAPAAADLSHTGISSLGEQRYSRS
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atgaccgcagacaaagataaaaggagggcgctgagcaaggaggcggcgagggtccggcgc
agggcggagtctgaggtgttctgtgacctcaagcgcctcttgcccctccctgccacagtc
cgcacccccctggacaaaccctcaatcatacggctcaccatcagctacctacgcacacac
accttactgacaggtagtggtgtgtcccaggtgagtcagagcagagtggaggagcagaga
cgagggctgggagagaccacaggtgatagacagacaggggggtcatggggcagcccacct
ggacggggctggggggagacagatctctacttgcaggtcctggggggcttcttcatcatc
gtgacaaccgagggacacatgatctacctgtctgagaatgttagccagcacatgggcctg
acacaggttgagttgatgggacacagcatgtttgagttcagccacccatgtgaccatgag
gacatcaaagacaagctctgctcagcctcagatgaatggtggccaagtcgacggaggaac
ttcctcatgaggatgaagagcaccatcacacacagtgggagaatcaccaacctcaagtca
gcgtgctggaaggttcttcactgtcaggggtgtgtgaaggtgtgtgtgttcccctccccg
cttacctgcctactcatcctctgccagcctctgcctctctcacacacactcgtccacaca
cactctttcaccagccagcacagcatggacttgagattcctccactgcgaccagagggtt
ggagagctgttggggtattgtccagaagagcttttgggtcactcagtgtatgagctgtgt
cacactatggatcaacatagtctgagcaggagccacaggaacttgtgttctaaaggccag
acagtcagtggtctgtacagactgctggtgaagaggggagggtatgtgtgggcggagagc
cacagtgctgtcatctccagtccccgcctctccaaaacaaactacagctcccatcagccc
ccctgtgtcctgtcggtcacctacatcctcagtggagtggaggagccatccttgttgctg
tctctggaccaggctctctacctggagacaggtgtagagtctgggcccactgcccctgca
gacctggagacaggtgtagagtctgggcccactgcccctgcagacctggagacaggtgta
gagtctgggcccggtgctgcagacctggagacaggtgtagagtctgggcccgctgctgca
gacctggagacaggtgtagagtctgggcccggtgctgcagacctggagacaggtgtaaag
tctgggcctgctgcccctgcagacctggagacaggtgtagagtctgggcccactgcccct
gcagacctggagacaggtgtagagtctgggcccactgcccctgcagacctggagacaggt
gtagagtctgggcccactgcccctgcagacctggagacaggtgtagagtctgggcccact
gcccctgcagacctggagacaggtgtagagtctgggcccactgcccctgcagacctggag
acaggtgtagagtctgggcccactgcccctgcagacctggagacaggtgtagagtctggg
cccgctgctgcagacctggagacaggtgtagagtctgggcccgctgcccctgcagacctg
gagacaggtatagagtctgggcccgctgcccctgcagacctggagacaggtgtagagtct
gggcccgctgcccctgcagacctggagacaggtgtagagtctgggcccgctgcccctgca
gacctggagacaggtgtagagtctgggcccgctgcccctgcagacctggagacaggtgta
gagtctgggcccgctgcccctgcagacctggagacaggtgtagagtctgggcccgctgcc
cctgcagacctggagacaggtgtagagtctgggcccggtgctgcagacctggagacaggt
gtagagtctgggcccggtgctgcagacctggagacaggtgtagagtctgggcccgctgct
gcagacctggagacaggtgtagagtctgggcccgctgcccctgctgctgctgatctttcc
cacactgggatcagcagcctgggagaacagaggtactcacgctcttga
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