Osmerus eperlanus (European smelt): 134031669
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Entry
134031669 CDS
T10927
Name
(RefSeq) LOW QUALITY PROTEIN: interferon-induced protein with tetratricopeptide repeats 5-like
KO
K24850
interferon-induced protein with tetratricopeptide repeats 5
Organism
oep Osmerus eperlanus (European smelt)
Brite
KEGG Orthology (KO) [BR:
oep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
oep03016
]
134031669
Transfer RNA biogenesis [BR:
oep03016
]
Eukaryotic type
tRNA degradation factors
Other tRNA degradation factors
134031669
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_12
TPR_2
TPR_CcmH_CycH
TPR_19
TPR_14
TPR_1
TPR_11
TPR_8
TPR_16
RMD1-3
CFAP70_TPR_C
TPR_7
TPR-S
TPR_15
TPR_MalT
ANAPC3
ARM_TT21_N
TPR_Psidin_N
ARM_TT21
CFAP70_mid_TPR
SHNi-TPR
Motif
Other DBs
NCBI-GeneID:
134031669
NCBI-ProteinID:
XP_062331358
LinkDB
All DBs
Position
12:11786292..11789963
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AA seq
744 aa
AA seq
DB search
MAIGSLXSNMEAKLKALQCHFTWGIDEADIADLKNLFRELLNFKRLCHARYHPICFNILA
FVSHLEGDSGVALGFLKKAEKVLRERKDDTELLVTYGNYAWVHYHAGNRDEVTVYLEKLE
EIYKAHPKVSMNPCDLPIIHGEKGWSFLRLGVTFYQRARDSFQKAVEGIPDSVSFNVGYA
FVLCRLEGMGRQRGAGGGEEAGDAIKQLKKALVLDPDNKDVKALLALKLQNQSTGRQEAT
RLVKQALRLAPDVPQVTRYVAKSLSKDSDLKTKLRQLECHFTWDLKKDHIDIRNLQIRLQ
NNIKQDLGRDAGVSRSYIFLAYVKYLQGYPEEAMEHMREAENLTRKKHRDCEKQLIVAYG
DLAWLHYHNGDYTKSQGYLEKLKQIKEKFPVRSGCLHSEVYGEKGWTFLKFSRKNYHQAL
EYFQRALELQPEESEWNIGYAIALHRTEEKQSSPQDSLAIKQLRRALETRPENGELLALL
AIQLSLYREFKEADELVEKALDMSPDDSNVMRYVSKYLRQRGDVDQSIDLLKRALDHTGQ
SAFIHHQMALCYKSKKIKMLTQQGSYRAKKGEVKRLRCLVIEHLRKATSLKSFFICAMAE
LALHYGEDGQHTRAEDLFKTTLETSIEKQEPAQIVHTFYAQFLQYQAKCEPRAIEHYTMG
LQLDKDSREGKVCAARLRKIAEARVARDPCDGEACGLLGLVYKIQEENSQAVEWYKKALE
LDMENEDYLSVLFELHINLQEQTV
NT seq
2235 nt
NT seq
+upstream
nt +downstream
nt
atggcgataggatctctctaatccaatatggaagctaaactgaaagctctccagtgtcat
tttacatggggcattgacgaggctgacattgcagacctgaaaaatctcttcagagaactc
ttaaactttaaaagattatgccatgcccgctaccaccccatatgtttcaacatcttagca
tttgtgagccacctagagggagacagtggtgttgcactagggtttcttaaaaaggcagag
aaggtgctgagagagaggaaggatgatactgagctgctggtaacctatggtaactatgcc
tgggttcactaccacgctgggaacagggatgaggtgacggtctaccttgagaagctggaa
gagatttacaaggcccatcccaaggtctctatgaacccctgtgatcttcccatcatccac
ggagagaagggctggagcttcttgaggctaggggtcaccttctaccagagggccagggac
agcttccagaaagctgtagaggggattccagatagcgtatccttcaatgtgggctatgct
ttcgtgctgtgccggttggagggcatggggaggcagagaggagcagggggaggagaggag
gctggggatgcgatcaaacagctgaagaaggccctagtcctggatcctgacaataaggac
gtgaaggccctcttggctctgaagctgcagaaccaaagcacaggcagacaggaggccacc
aggctggtgaagcaggcccttcgtctggctccagacgtgccccaggtcacccgctacgtg
gccaagagtctcagtaaagacagtgatcttaaaactaaactacgccagctggaatgtcac
ttcacctgggacctgaagaaagatcacattgatattagaaacctccagatcagactacag
aacaacattaaacaagatctgggcagagatgcaggtgtttctcgctcatacatctttctg
gcgtatgtgaagtatctccagggttaccctgaggaggccatggagcacatgcgtgaggct
gagaacctgaccagaaagaaacacagagactgtgagaagcagcttattgttgcctatggc
gacctggcctggcttcactaccacaatggagattacacaaagagccagggatacctggag
aaactgaagcagatcaaggagaagttccctgtgagatcgggatgccttcactctgaggtg
tatggggagaaaggctggactttcctcaagttctcacggaagaactaccaccaggccctc
gagtacttccagagggccttggaactacagccagaggaaagtgaatggaacataggctat
gctattgccctgcatcgtacagaggagaagcaatccagtccccaagactccctggctatc
aaacagctgagacgagctttagagaccagaccagaaaatggggagctgctggccctgctg
gccatacaactgtccctctacagggagtttaaagaggcagatgagctggtggaaaaagcc
ctagacatgtcacctgacgactcaaatgtaatgcgctacgtgagtaagtatctcaggcag
cgcggtgatgttgaccagtccattgacctgttaaaacgagcccttgatcacacaggccaa
tctgctttcatccaccatcagatggctctctgctacaagagcaagaagattaagatgcta
acacaacaaggaagttatcgtgcaaaaaagggtgaggtcaaacggctgaggtgtctggtc
attgaacaccttaggaaggccacttctctgaaatctttcttcatctgtgctatggctgaa
ctggctctgcactacggggaggatggtcaacataccagggcagaagatttgttcaagacc
accctggaaacaagcattgagaagcaggagcctgcccagattgtccacaccttctacgct
cagttcctgcagtaccaggccaagtgtgagccgcgagccatcgagcattacaccatgggc
ctgcagttggacaaggactccagggaggggaaggtatgtgcggctaggctgaggaagatt
gcagaggcgagggtggccagggacccttgtgatggagaagcgtgtgggctgttggggctg
gtatacaagatacaggaggagaacagccaggccgtggagtggtacaagaaggccctggag
cttgacatggagaatgaagactacctctctgttctctttgagctacatattaacttacag
gaacaaactgtctga
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