KEGG   Osmerus eperlanus (European smelt): 134032124
Entry
134032124         CDS       T10927                                 
Symbol
rlim
Name
(RefSeq) E3 ubiquitin-protein ligase RLIM
  KO
K16271  E3 ubiquitin-protein ligase RLIM [EC:2.3.2.27]
Organism
oep  Osmerus eperlanus (European smelt)
Brite
KEGG Orthology (KO) [BR:oep00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:oep04121]
    134032124 (rlim)
Enzymes [BR:oep01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     134032124 (rlim)
Ubiquitin system [BR:oep04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    134032124 (rlim)
SSDB
Motif
Pfam: zf-RING_2 zf-rbx1 zf-RING_11 zf-C3HC4_2 zf-C3HC4 zf-ANAPC11 zf-RING_5 zf-C3HC4_3 zf-RING_UBOX Prok-RING_4 zf-RING-like zf-RING_16 zf-RING_4
Other DBs
NCBI-GeneID: 134032124
NCBI-ProteinID: XP_062331942
LinkDB
Position
13:complement(3330537..3336523)
AA seq 698 aa
MEGSDSSEQGGSDQSESQRRRQLDRLDREEAFYQFVNNLSEEDYRLMRDNNLLGTPGEIT
EEELLSRLQQIKDGPEQLDSNSTSLESGEGTGDPPEASEDSSNGDTLLDWLNTVRRTGNT
TRSGHRGNQSWRAVSRTNPNSGDFRFSLEINVNRNLAEQQARAEAGEAQETVEMPGVVVE
AEPTETPMETEESVVEPVLEHVVEELTVTVEPEPELGALPVPEAEADAGFVPVPLVEEAP
YVVPEVVVAASVPCSPPASPLVVTPLPLPPSPPVQAPAPSNLHTEEPLRRGQRRARSRSP
EQRRTRARTARSRSPLTLELLDSHPRQAPNTHSPDTFPASPPEGSSRTRQHVLSRQSTAE
YDPQPARAGLGAGTGAPEITSPPPPEGEATGGEAGATNRRPPTIMLDLQVRRVRPGEYRQ
RDSIANRTRSRSQNSNNTFLYESERGGFRRTFSRSERAGVRTYVSTIRIPIRRISDAGLG
EATSMALQSMIRQIMTGFGELSYFMDSDSDSSDSNRGANPPADLAEALGNPDAAVAAAAA
VVAEPAVVASIPVGLGTPEARTEERDVEEGLGSGSSARGGGGGSRARPRAPISLEEPSSL
PFLRLAHFFLLNDDDEDQPRGLTKEQIDNLSTRNFGESDALKTCSVCITEYTEGNKLRKL
PCSHEYHVHCIDRWLSENSTCPICRRAVLVSTNRESVV
NT seq 2097 nt   +upstreamnt  +downstreamnt
atggaaggttccgacagctccgagcaaggaggcagcgaccagtcagagtcgcagcgccgg
aggcagttggataggctggacagagaagaagccttctaccagtttgtgaacaacctgagt
gaggaagattatagactcatgagagacaacaacctactggggaccccaggtgaaatcaca
gaggaggagctgctgagtaggcttcagcagatcaaggatggtccagagcagcttgacagc
aacagcactagtcttgagagtggagaaggcacaggggatccgcccgaagcttctgaggat
tcgtccaatggcgacaccctcctagactggctaaacacagtccgaaggacgggaaacacc
acgcgaagcggtcaccgtgggaaccagtcatggcgggcagtcagccgaaccaacccgaac
agcggggacttccgtttcagtctagagatcaacgtaaaccgtaaccttgcggaacagcaa
gccagagccgaagctggcgaagcccaggagactgtagagatgcctggagttgtagttgag
gccgagcccaccgaaacgccaatggaaactgaggagtctgtggtggagcctgtgttggag
catgtggtggaggagctgacagtgacagttgagcctgagccagagctgggggctttacca
gtgcctgaggcggaggcagatgctggttttgtacctgtcccgctggtggaagaagcccct
tatgtagtaccagaggttgtagtagctgcatcagtgccctgcagcccacctgctagcccg
ctggttgtaaccccacttcccctcccaccatcacctcctgtccaggccccagccccttcc
aaccttcacacagaggagccccttcgccggggccagaggagagcccgcagccgcagccct
gagcagcgtaggaccagggctcgcacggccaggagtcgctcccccctcaccctggagctc
ctggactcccacccccggcaagcccctaacactcacagccccgacacctttcctgcatcc
cctccggaggggagctccaggactcgacagcatgtgctgtccaggcagagcacagccgaa
tacgaccctcagccagctagggccggacttggagctggaaccggagccccagagataacc
agtcccccaccaccagagggagaggccacaggcggggaagcaggggcaactaacaggcgg
ccccccaccatcatgctggatcttcaggtgcgtcgggtgcgtccaggagagtaccgtcag
agggacagtattgccaaccgcactcggtctcgctcccagaactccaacaatacatttctg
tacgagagcgagcgtggagggttccgcagaaccttctcacggtccgaacgtgccggtgta
cggacatatgtcagcaccatccgcatccccatacggcggatctcagatgcaggtctgggc
gaggccacctccatggcgctccagtcaatgatccgtcagatcatgacgggtttcggagag
ctcagttacttcatggactctgactcggattcctcagattcgaaccgtggtgccaaccca
ccggcggacctagcagaagcccttggtaacccggacgctgctgttgctgctgcagctgct
gtggtggcagagcctgctgtggtggcaagcatacctgttggccttgggacccccgaggca
aggacagaagagagggatgtagaagaggggctggggtctgggtcctcagccagaggtggg
ggcggaggcagccgggcccggccccgggctcccattagtctggaggagcccagctccctc
cccttcctccgccttgcccacttctttcttctgaatgacgacgatgaggaccagccgcgg
gggctgaccaaagagcagattgacaacctgtccacgcgcaactttggtgagagcgacgcg
ctcaagacctgcagtgtgtgtatcacagaatacactgaaggaaacaagctaaggaagctg
ccctgctcacacgaataccatgtccattgcattgaccgctggctatcagagaactccact
tgtcccatttgtcgcagggcagtcctggtatccaccaatcgggaaagtgtggtgtag

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