Osmerus eperlanus (European smelt): 134032199
Help
Entry
134032199 CDS
T10927
Symbol
si:ch211-114c17.1
Name
(RefSeq) pre-mRNA-processing factor 39 isoform X1
KO
K13217
pre-mRNA-processing factor 39
Organism
oep Osmerus eperlanus (European smelt)
Brite
KEGG Orthology (KO) [BR:
oep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
oep03041
]
134032199 (si:ch211-114c17.1)
Spliceosome [BR:
oep03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
134032199 (si:ch211-114c17.1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_PRP39_N
HAT_PRP39_C
Suf
HAT_Syf1_CNRKL1_N
TPR_14
HAT_Syf1_CNRKL1_C
TPR_19
TPR_12
TPR_16
HrpB1_HrpK
TPR_11
Motif
Other DBs
NCBI-GeneID:
134032199
NCBI-ProteinID:
XP_062332055
LinkDB
All DBs
Position
13:complement(11297289..11303125)
Genome browser
AA seq
721 aa
AA seq
DB search
MAAEGSEDFSNNGELGDPSAPEVSETFESATDMAVDSEENAGSELPEVAAAPDPNAYTMP
PAEEDDEGELPVDFDRLWKAAHDNPQDFSSWTDLLQYCEQESHMTASRRALVAFLARYPL
CYGYWKKYADLERRAGYTTKAEESLVFQVCVQGLQAIPLSVDLWIHYINLLLGTLDMNQP
ESPKRIRSAFEEALVAAGLDFHSDRLWDLYVEWEKEQGDMKAATGVYDRALKTPTQLYSS
HYEKFKVHLNTNEPKEVLSPEEYEELCVEYRQALKAERAAARAEGGEEEEERPPGEEEPA
SLDGKDSEEMMQKMRELALARREKVFQLMEGEVRKRWNFEDAIKRPYFHVKPLDRAQLRA
WHSYLDWELTQVDLGQGETETEDPEFLEALRDSGVVAGGDRRIRVLFERCLIACALYEEF
WTKYVKYLEPQSLEEARSLFIRACEVHLAHKHTIHLQWATFEERHGNLDEARRVLVALEA
AMPGLAVVRLRRVGLERRAGRTDESEALLRDAVAQSKETPSLHAFYSIKLARYLLKLLKN
PGKARGVLQEALEISPDNSKLHLNLLELEVSGDPRGSPEGVQECVTRALAAPLSPRTKIL
FSQRGLQYAEDYGNSVQSVLSIYEEHQKLLKELGKKRGAENGDGEEPEKMSKSDDGSAEP
AQAPPTMPHVPITTPPPPMMGGDMSGQGGYGAYNSWYQQPQYGGYGYQNPWNYNQGYYPP
S
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
atggcggcagaaggttcggaagacttcagcaacaacggggaactcggggatccttcagct
ccggaggtctcagagactttcgagtctgcaacagatatggctgttgattcagaggagaac
gcaggcagtgagctacccgaggtggcggcagccccagatccgaatgcatacaccatgccc
ccggccgaggaggacgatgaaggggagttgccagtggactttgaccgcctgtggaaagcg
gcccacgacaatccacaggatttctcaagctggaccgacctgttgcagtactgcgagcaa
gagagtcacatgactgcttctcggcgagctcttgtagcatttctggcccgctatccacta
tgctatggttactggaagaagtatgctgacctggagcgccgggctggatacaccaccaaa
gcagaggagtctctggtgttccaggtgtgtgtgcagggattgcaggccatccctctgagt
gtagatctgtggatccactacatcaacctgctcctgggcaccctggatatgaaccagcca
gagtcccccaagcgtatccgcagtgcatttgaggaggcgcttgtggccgctgggctagat
ttccactccgatcgcctgtgggacctctatgtggagtgggagaaggagcagggggacatg
aaggctgccacgggggtctacgaccgggcgctcaagacccctacgcagctctacagcagc
cactacgagaaattcaaggtccacctgaacaccaacgagcccaaggaggtgctgtcacca
gaggagtatgaggagctgtgtgttgagtacaggcaggccctgaaagccgagagggccgcc
gcccgggccgaggggggagaggaggaggaagaaaggcccccgggggaggaggagcccgcg
tccctcgacggcaaagactccgaggagatgatgcagaagatgcgagagctggccttggct
cgcagagagaaggtcttccagctgatggagggggaggtcaggaagcgctggaactttgaa
gatgcgatcaagcgtccctatttccacgtcaagcctctggaccgggcccagctgcgggcc
tggcactcctacctggactgggagctgacccaggtggatctgggccagggggagacggag
accgaggaccccgagttcctggaggccctgagggacagcggggtggttgccgggggcgac
cgaaggattcgcgtcctcttcgagcgctgcctcatcgcatgcgccctctatgaagagttc
tggactaagtacgtcaagtacctggagcctcagagtttggaggaagccaggagtttgttc
atacgagcatgtgaggtccacctggcccacaaacacaccatccacctgcagtgggccaca
tttgaggagaggcatggaaacctggacgaggccaggagagtgctggtggctctggaggcc
gccatgcctggcctggccgtggtccgcctgcgtagggtggggctggagaggcgggctggc
cgcaccgatgaatcggaggcactgctaagggatgcagtggcccagtccaaagaaacgccg
tccctccatgctttctactccattaagctggcccgctacctgctcaagctgctgaagaac
ccgggaaaggcccgtggagtcctgcaggaggctctggagatcagcccggataacagtaag
ctgcacctgaacctgctggagctggaggtgtcaggggacccccgtggctcgcctgagggg
gtgcaggagtgtgtgacacgggcactggccgcacccctctcgccccggaccaagatcctc
ttctcccagagaggcttgcagtacgctgaggactatgggaactctgtgcagagtgtgctg
agtatctatgaggagcaccagaagctgctgaaggagctgggcaagaagagaggagcggag
aacggtgatggcgaggaacccgagaagatgagcaaatcagacgacggctctgcagagcct
gcccaggcccctcccaccatgcctcacgttcccataaccacgccccctccccccatgatg
ggcggggacatgagtggtcagggaggttatggggcgtacaacagctggtaccagcaacca
caatatggaggttacggttaccagaacccatggaactacaatcagggctactatcctccc
agctag
DBGET
integrated database retrieval system
