Osmerus eperlanus (European smelt): 134032268
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Entry
134032268 CDS
T10927
Symbol
neil3
Name
(RefSeq) endonuclease 8-like 3 isoform X1
KO
K10569
endonuclease VIII-like 3 [EC:3.2.2.-
4.2.99.18
]
Organism
oep Osmerus eperlanus (European smelt)
Pathway
oep03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
oep00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
134032268 (neil3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
oep03400
]
134032268 (neil3)
Enzymes [BR:
oep01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
134032268 (neil3)
DNA repair and recombination proteins [BR:
oep03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
134032268 (neil3)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Zn_ribbon_GRF
H2TH
Fapy_DNA_glyco
Zn_ribbon_RanBP
zf-FPG_IleRS
DUF2002
Motif
Other DBs
NCBI-GeneID:
134032268
NCBI-ProteinID:
XP_062332167
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Position
13:complement(16457312..16461931)
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AA seq
575 aa
AA seq
DB search
MVEGPGCTLNGEKIRSRVQQGQKVQEFRSPTTKQRYDPNKGSFQILTGCKYTGVATLGKE
LFLYFGQRALRVHFGMNGSMRINPAKTQGRKSLSPMLEIHLTRDVIFLFDSTAEIRLTED
CEHRLRAMQTLDVCSPQFSSCRAEEVVRGQRDRMLCDVLLDQTVLPGVGNIIKNEALFDS
GLNPAVKINQLTDEQVHHLVKMTRDFTLLFYKCRKSGSPLHKHYKVYKRPQCGQCRNTIT
VCRLGDNGRMTYFCSRCQSADPGEVDLSKLPARNSLLDWAYRASVEASDAVAKREEEEWA
CELCTLVNQPAVRTCEACLTPRTRVPTDERSVEEAFFTRDLIKYPCNAFSKPREELKVNR
KAAFGSTTLVFTDLCKKPNQADSPFSPASSHLNSLAGERGLNKHNVCQGTTSPNYASGGW
QNKSTELSKRESLASSSQPSKKMRIDHSPFPGSKAHNGARRVSSSQTKAPNEETQGVPTI
PCCTSHQCPCVLRVVNKEGENKGRQFYNCSLPRDKRCNFFEWADLHFPLCNHGKRCLRRT
VLKLGPNNGRNFYVCSFLMGKQCDYFLWASSVTTS
NT seq
1728 nt
NT seq
+upstream
nt +downstream
nt
atggttgaggggccgggttgcacgctgaacggagagaagattcgttcgagggtccagcaa
ggacagaaagttcaagaattccgaagtccgacgacgaaacagagatatgacccaaataaa
ggctcgttccagatcctcactgggtgtaaatacactggagttgctaccctgggaaaggaa
ctgttcttatacttcggccaaagagcgttgagagttcactttggtatgaatggttcaatg
cgtataaaccctgccaagactcagggcaggaaaagccttagtccgatgctggagatccac
ctcaccagagacgtaatcttcctcttcgactccacagctgaaatcaggctgacagaggac
tgtgagcacagactccgggccatgcagaccctggatgtgtgctcaccccagttcagttcc
tgccgtgcagaggaggtggttcgaggacagagagacaggatgctctgtgatgtgctcctg
gaccagaccgtcctgcccggggtggggaacatcattaaaaacgaggccttgtttgactcg
ggccttaaccctgcggtaaagatcaaccagctgacggatgaacaggtccaccatctagtg
aagatgacacgtgacttcaccctcctgttctataagtgccgcaaatcgggctctcctctc
cacaaacactacaaagtctacaagcgtcctcagtgtggccagtgccgaaacaccatcaca
gtctgtcgccttggcgacaacggcaggatgacgtacttctgttcgcgctgtcagagcgcc
gacccgggagaggtcgacctgagcaaacttcccgcaaggaacagcttactggactgggct
taccgggcgtctgtggaagccagcgatgccgtggccaagagagaggaggaggagtgggcc
tgtgagctgtgcaccctggtgaaccagccagcggtgaggacctgtgaggcctgcctcact
cctaggactcgggttcctacagacgagcgcagcgttgaggaggctttcttcaccagagat
ttaatcaagtacccttgcaatgccttttcaaaaccacgagaggagctcaaagtcaaccgc
aaggctgcgtttggaagcaccacccttgtttttaccgacttgtgcaaaaagccaaaccaa
gcggactctcctttttccccagccagcagtcatctgaattccttggcgggggagagaggt
ttaaataaacacaacgtctgccaagggacaacaagtcccaattatgcctctggtggctgg
cagaataaaagcacagagctctccaaaagggaatcgttggcctcctccagtcaaccatct
aagaaaatgagaattgatcacagtccttttcctggtagcaaagctcacaatggagcacgc
cgtgtaagctcctcccaaaccaaagcaccaaatgaggaaacacagggtgttcccacaatc
ccctgctgtacttcccatcagtgtccctgtgtcctccgcgtggtcaacaaggaaggagag
aacaagggccgtcagttttacaactgctcgctccccagagacaaacgctgtaacttcttt
gagtgggctgatttacatttccccctctgtaaccatgggaaacgctgtctcaggagaact
gtgctcaaactggggcctaataacggacgaaacttctacgtctgcagtttcctgatgggc
aagcagtgtgactacttcctgtgggcaagcagtgtgactacttcctga
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