Osmerus eperlanus (European smelt): 134032272
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Entry
134032272 CDS
T10927
Symbol
pitx2
Name
(RefSeq) pituitary homeobox 2 isoform X1
KO
K04686
paired-like homeodomain transcription factor 2
Organism
oep Osmerus eperlanus (European smelt)
Pathway
oep04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
oep00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
134032272 (pitx2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oep03000
]
134032272 (pitx2)
Transcription factors [BR:
oep03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
134032272 (pitx2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeodomain
OAR
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
134032272
NCBI-ProteinID:
XP_062332174
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Position
13:complement(16542957..16554296)
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AA seq
316 aa
AA seq
DB search
MNSMRDPLNLDHHHHHLSGNKLASTHHTALAMASSLQPLQRSVDSKHRSEVHTVSDTSSP
ESVEKEKGQSKNDDSSDDPKKKRQRRQRTHFTSQQLQELEATFQRNRYPDMSTREEIAVW
TNLTEARVRVWFKNRRAKWRKRERNQQAELCKNGFGPQFNGLMQPYDDMYPSYTYNNWAA
KGLTSASLSTKSFPFFNSMNVNPLSSQTMFSPPNSISSMSMTSSMVPSAVTGVPGSSLNS
LNNLNNLSNPSLNSGVPTPACPYAPPTPPYVYRDTCNSSLASLRLKAKQHSSFGYASVQN
PASNLSACQYAVDRPV
NT seq
951 nt
NT seq
+upstream
nt +downstream
nt
atgaactctatgagggatccactgaatttggaccatcaccaccaccacttgtccgggaat
aaactcgcatccacgcaccacacggcacttgcaatggcttctagcctgcagcccttgcag
cggtctgtggactccaaacaccggtcagaagtgcatactgtatcggacacctccagtcca
gagtctgtagaaaaagaaaagggccagagtaaaaatgacgactcttcagatgaccctaaa
aagaagcgacagaggcggcagaggactcacttcaccagccagcagttgcaggagctcgag
gccacgttccagcgaaatcgctatccggacatgtccacaagagaggagatagctgtttgg
accaacctcacagaggcccgcgtcagggtgtggttcaagaaccggcgcgcaaaatggagg
aaaagggaaaggaatcaacaagccgagctatgcaagaacggctttggtcctcagttcaac
ggactaatgcagccctacgacgacatgtatcccagctacacatacaacaattgggccgcc
aaagggctaacttcggcctctttgtccaccaaaagttttccttttttcaattccatgaac
gtcaacccgttgtcatcgcaaacgatgttctcccctcctaactctatctcctccatgagt
atgacctccagcatggtaccgtccgcagtcaccggtgtacccggctcgagcctcaacagc
ctcaataacttgaacaacctcagcaacccctctctgaattcgggagttcccacgccggcc
tgcccctacgccccgccgacccctccttatgtgtacagggacacttgtaactccagtctg
gctagcctgagactgaaagctaagcagcactcgagttttggatatgccagtgttcagaac
ccggcctctaatctgagtgcctgccaatacgcagtggatagaccagtctaa
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