Osmerus eperlanus (European smelt): 134032282
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Entry
134032282 CDS
T10927
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-2
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
oep Osmerus eperlanus (European smelt)
Pathway
oep04080
Neuroactive ligand-receptor interaction
oep04082
Neuroactive ligand signaling
oep04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
oep00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
134032282
04082 Neuroactive ligand signaling
134032282
04519 Cadherin signaling
134032282
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
oep04040
]
134032282
Ion channels [BR:
oep04040
]
Ligand-gated channels
GABA-A
134032282
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Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
DUF5522
Motif
Other DBs
NCBI-GeneID:
134032282
NCBI-ProteinID:
XP_062332189
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All DBs
Position
13:17965865..17985757
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AA seq
454 aa
AA seq
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MRNKESGFPYLIICFMLMILWQTRSVSADAATNAFKTNITLFTRILDRLLDGYDNRLRPG
LGDRVTEVTTNIYVTSFGPVSDTDMEYTIDVFFRQSWKDERLKFEGPMNILRLNNLMASK
IWTPDTFFHNGKKSVAHNMTMPNKLLRIQDDGTLLYTMRLTVHAECPMHLEDFPMDFHSC
PLKFGSYAYTMSEVTYAWTHNASSSVVVEEESSRLNQYDLVGKTAGQETIKSSTGEYTVM
TAHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGVTTVLTMTTLSISA
RNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYFTKRGWAWDGKSIVNDKKKEKASV
VKKNNAYAVAVANYAPNITKDSGLPTIAKGGVSDPGKTKVEGKAADSKKTFNSVSKIDRM
SRIMFPVLFGSFNLVYWATYLNREPVIKDMVPSN
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atgaggaataaggagagtggatttccatatctgatcatctgcttcatgctgatgatcctc
tggcagacgaggtccgtttctgctgatgctgccaccaacgccttcaagaccaacatcacc
ctgttcactcgcatcctggaccgcctcctggatggctatgacaatcgcctgcgtccagga
ctgggggatcgtgtgacagaagtgacgaccaacatctacgtcaccagctttggccccgtg
tcagacacagatatggaatacaccatcgacgtctttttccggcagagctggaaagatgaa
cggttgaagtttgagggaccaatgaacattttgcgactgaacaatttgatggccagtaag
atctggactccagatacgtttttccacaatggcaagaagtcagtcgcccacaacatgacc
atgcccaacaagctactgaggatccaagatgatggtactctgctctacaccatgaggtta
acagttcatgctgagtgtcccatgcatctagaagatttccccatggacttccactcatgt
cccctgaagttcggcagctatgcctacaccatgtcggaggtgacgtatgcctggacccac
aacgcctcatcctccgtggtagtggaggaggagagctcccgtctcaaccagtacgacctg
gtggggaaaactgcaggacaggaaaccatcaagtccagcacaggtgaatacacggtgatg
actgcacacttccacctgaagaggaagatcggttactttgtgatccagacgtacctgccc
tgcatcatgactgtcatcctgtctcaggtctccttctggctcaacagggagtctgtccct
gccaggacggtgtttggggtgaccactgttctgaccatgaccaccctcagcatcagcgcc
cgtaactccctccccaaggtggcctatgccacggccatggactggttcatcgccgtctgc
tacgccttcgtgttctccgccctcattgagtttgccaccgtcaactacttcaccaagcgc
ggttgggcgtgggacgggaagagcattgtgaatgacaagaaaaaagagaaggcatctgtc
gtgaagaagaacaacgcgtatgccgtagcggtggccaactacgcacccaacatcaccaag
gactcaggcctgcccaccatcgccaagggcggggtgtccgaccctggcaagaccaaggtg
gagggcaaggccgcggacagcaagaaaacgttcaacagcgtgagtaagatcgaccggatg
tcgaggataatgttccctgttctgtttggaagctttaacctggtctactgggccacgtac
ctaaacagagaacctgtcattaaggatatggtcccatccaattaa
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