Osmerus eperlanus (European smelt): 134032388
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Entry
134032388 CDS
T10927
Symbol
sh3tc2
Name
(RefSeq) SH3 domain and tetratricopeptide repeat-containing protein 2 isoform X1
KO
K24313
SH3 domain and tetratricopeptide repeat-containing protein
Organism
oep Osmerus eperlanus (European smelt)
Brite
Membrane trafficking [BR:
oep04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
134032388 (sh3tc2)
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Gene cluster
GFIT
Other DBs
NCBI-GeneID:
134032388
NCBI-ProteinID:
XP_062332331
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Position
13:5407234..5425077
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AA seq
1633 aa
AA seq
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MALLSGSWGALASMACCCRQRLLSSSCCHRLITPCLCFTDISPAELDALWREPPYTLAVA
NEHFPGNDLMAQGSGEESEGPGAESGEGGEESQSYWKRKEAFARGSTVSLAVGERFSSDV
VLVFSGRRRASAVPDADLQEALRTRLRVVESNSQDVIQLFKDLSARLLSVHAEKDSFVIT
FKTVEEIWKFSTYLALGYVARCLENFLCDQSFWLDPELLSDLEINVSLNEEHLATLYLGL
LLQEGSFFAKALYGSSEKSEEEEELAFGKNDLLMVRDTGQDSMWEGTLLPDGRHGLVPVS
AMQPLPYPFYQWFLRKFPGCAGGSASDRGQLPHPIVTGVCVAVEDYSPVCGEDLQLSRGD
RVEVQGLLLRGLDMFVGTNSSTGRFGFVRQAHVQPLDTKPLDGQLVFLTEEERAGLALVN
PFSTEPSDRSLLDRLFSSDISTVYRLDRLDESDFTYIRNQPKQDPKTPTSTRQSLISEKS
GGTPPYHSSPRASVSQPSPRPSPRPSLHQSQNPVGRDGELLSFSLEDTFRELDVFQDNPP
LFLEDASWEGDEGELCDPTLTLLNHSNFQESFLPLYDLQCSFLGEMFGGQSEEDLLGHLE
GAREAAKRAGMHWAHRRACFLLGRLSAKKLKYSQARVYYEESLNVRVDGFSDLPLLTALY
TNLTSVYLKQRMTDKLPQTLERACALLLCLPSHSFTSLDEFELLCLLLRRAVVEGNKHLE
ARVCYLTASLFLLLGKSEDALAFVERLQFLTVTLSVEEGRPIAPLDLNWLLCRLYNRKYM
PYLALASLSLDTRQDHSLQEAFQRIQLFVRNSVRLNPHWREGTSLLPAQIVVYLQHALAL
AEQGSDLKTQRDLCLGLACVYQQYGALERALPCAQRAVAAGASINEEEGFQASVLLGWLL
VMTGRPEGGLHTLRPLLLSLQGTDSPTQRGVIHNLLALCLRRQGCVREAGHHLHCALRIS
QESGNQRNQALALANLGCLALGAGAPAVAERFLVRSLSLFLEIWESPTDEEHVQTYLWLG
RSYKDRGRSQNVRLCYEMGLLIALQARNLHSQMVVSKTLSRLYADLLLYGQSIIYYEHCV
SVSRELKDKRLEGEYLEILSSLYLTLNTEKSSRKSLDCSKQSLRISIDLGKREEESETWL
QVGRIYYLIHEDELADMYLQAAVKTALRMNDPHFAMSIYEEAGDVFFKGHRNRMASLPFY
RDGSLPFARSIRDVQSEFRLLSKLTELLSCQGEHKEALQYAVLAVEVSSHTGVCVNERAA
YHRLASAHYSLQQYELSENYYLKSLSLCPPILQHPSEARYYTKLYCRLGDLTMYKLKDAH
DAVGYFQLALAAALEDQESPQALYVICMKLAEIYANHMPDAQLCQAYRERARSLRRQLSG
QGVSESREGGEGGVEGGGEGEVEGGVEDARVEGGDTGRRQVETEHAEETDLCCTRSTRQK
HVASKAGTPPADSRRTETGAGRPDSRDTDGERRETGHAGAETGRTENRVEDAETEREWNG
RSETDTEAAAEHPENLHPDAEPEAGARHEENNRTGTEMESENPGTGTETEAGHTATHFTE
AKTNPTRKVTENGCDDSDHANTTRANPVKRLEEDSELHMRCSEPTEETNDEGHSQGDPDK
DLDPGHVNAGESD
NT seq
4902 nt
NT seq
+upstream
nt +downstream
nt
atggcactgctctctgggagctggggagcgctggccagcatggcgtgttgttgtcgtcaa
cgtctcctctcctcctcctgctgccaccggctcatcaccccctgcctctgcttcacagac
atttctcccgctgagctggatgctctctggagggaacccccgtacacgctcgcagtagcc
aatgagcacttcccaggaaatgacctcatggcacaagggtcaggggaggagtctgagggt
ccgggggcggagtcaggagaaggaggggaggagtctcagagctactggaagaggaaggaa
gcgttcgccagaggaagcaccgtgtcgctggcggtgggagagaggttctcctcagacgtg
gtgttggtgttcagcgggaggaggagggccagcgcagtacctgacgctgacctacaggag
gcactgcgcaccagactcagagtggtggagagcaacagccaggatgtcatccaactcttc
aaggacctgtcggctcgcctgctgtccgtccacgctgagaaggacagctttgtgatcact
tttaagactgtggaggagatatggaagttctccacctacctggctctgggctacgtggct
cgctgtctggagaacttcctgtgtgaccagtccttctggttggacccggagctgctcagc
gatctggagatcaacgtgagcctgaacgaggaacacctggccaccctgtatctgggactg
ctcctacaggagggctccttctttgccaaggctctgtacggcagcagtgagaagagcgag
gaggaggaggagctggcgttcgggaagaacgacctcctgatggtgagagacacggggcag
gacagcatgtgggagggcaccctgctgcccgacggccgtcacggcctggtgccggtcagc
gccatgcagcctctgccataccccttctaccagtggttcctgaggaagtttcctggctgt
gctggcggctcggcaagtgacagaggacagctcccccaccccatagtgacaggtgtgtgt
gtggcggtggaggactacagccccgtgtgcggggaggacctgcagctgagccggggggac
agggtggaggtccagggcctgctcctcagaggactggacatgttcgtaggaaccaactcc
tccaccggacgcttcggcttcgtccgccaggcccacgtccagcctctcgacaccaaacca
ctagatggacaattggtgtttctgacggaggaggagagggcaggcctggccttggtgaac
cccttcagcacggagcccagcgacaggagcctgctggacagactcttctcctcagacatc
agcactgtctaccggctggatagattggatgaatcggactttacatatatccggaaccaa
ccaaaacaagaccccaagacccccaccagcactcgccagagcctcatttcagagaagagt
gggggcacccccccctaccactcctccccaagggcctctgtctctcagccctccccccga
ccttccccccgaccctccctccatcagtcccagaacccggtgggccgcgatggcgagctg
ctgtcgttcagtctggaggacaccttcagggagttggacgtgtttcaagacaaccctcca
ctcttcctggaggacgccagctgggagggggatgagggcgagctctgtgaccccacgctg
accctgctgaaccacagtaacttccaggagagcttcctgccactgtatgacctccagtgc
tccttcctgggggagatgttcggagggcagagtgaggaggatctactgggtcacctggag
ggtgccagggaagctgccaagcgggcagggatgcactgggcacaccgccgggcatgcttc
ctcctgggcaggctcagcgccaagaagctcaagtactcccaggcccgtgtgtactatgag
gagtctctgaatgtgcgtgtggacggcttctctgacctcccgctcctcaccgctctgtac
accaacctgacctcggtctacctgaagcagcgcatgacagacaagctgccccagaccctg
gagagggcctgcgccctgctgctctgcctccccagccacagcttcacctccctggacgag
ttcgagctgctctgcctgctgctgaggagggcggtggtggagggcaacaagcacctggag
gcgcgggtctgctacctgacggccagcctcttcctgctcctgggaaagagcgaggacgcc
ctggccttcgtggagcgcctgcagttcctcaccgtcaccctgtcggtggaggaggggcgc
cccatcgccccgctggacctcaactggctcctctgccgcctctacaaccggaagtacatg
ccctacctggccctggcctcactcagcctggacaccaggcaggaccactctctccaggag
gccttccagcggatccagctgttcgtcaggaactcggtccggctcaaccctcactggagg
gagggcacgtccctcctcccggcccagatcgtggtgtacctccagcatgccctggccctg
gccgagcagggctcggatctgaagacccagagggacctgtgcctgggcctggcctgcgtc
taccagcagtacggggccctggagcgggctctgccctgcgcccagcgggctgtggcggcc
ggggcctccatcaacgaggaggagggcttccaggcctcggtcctgctgggctggctgctg
gtgatgacggggaggccggagggaggcctccacaccctgcggcccctgctgctctccctg
cagggcacagacagccccacccagaggggtgtgatccacaacctgctggctctgtgtctg
cggaggcagggttgcgtccgcgaggccggccaccacctccactgcgcccttcggatctcc
caggagagtggcaaccagaggaaccaggccctcgccctggccaacctgggatgcctggcc
ctgggggcgggcgcaccagctgtggcagagcgcttcctcgtcaggtccctgagtctgttc
ctggagatctgggagagccccacggacgaggagcacgtgcagacctacctgtggctgggg
cggagctacaaggacagggggcggagccagaacgtcaggctctgctatgagatgggcctc
ctcatcgccctgcaagctaggaacctgcacagtcagatggtggtgtctaagacgttgagt
cgcctgtacgcagacctgctgctgtacggccagagcatcatctactacgagcactgtgtg
agcgtgtccagggaactgaaggacaagaggctggagggggagtacctggagatcctcagc
agcctgtacctcacgctcaacaccgagaagtcgtcccggaagtccctggactgctccaag
cagagcctgcgcatctccatcgacctggggaagagggaggaggagtcagagacctggctc
caggtgggacgcatctactacctgatccacgaggacgagctggccgacatgtacctgcag
gcagcggtgaagacagcgctgaggatgaacgaccctcacttcgccatgagcatctacgag
gaggccggagacgtgttcttcaaaggacacaggaacaggatggcttccctgcccttctac
agggatggcagtctgccgttcgccaggagcatcagagacgtccagtctgagttccgtctg
ctgagtaagctgacagagctgctgagctgccagggggaacacaaggaggccctgcagtac
gctgtcctggctgtggaggtcagcagtcacacaggtgtgtgtgtgaacgagcgcgccgcc
taccaccgcctggcctcggcccactactccctccagcagtacgagctgtcggagaactac
tacctcaagtccctgtccctctgtccccccatcctgcagcaccccagcgaggcccgctac
tacaccaagctctactgcaggctgggagacctgaccatgtacaaactcaaggatgctcat
gacgcggtggggtatttccagctagccctggccgctgctctggaggaccaggaaagcccc
caggctctgtacgtgatctgcatgaagctggcagagatctatgcaaaccacatgccggac
gcccagctctgccaggcctacagggagcgggcccggagcctgaggagacagctgtctgga
cagggggtctccgagagcagagaggggggcgagggaggggtggaggggggaggcgagggg
gaggtggaggggggggtggaggacgcgcgcgtggaggggggagacacggggaggcgtcag
gtggagacagaacacgcggaggaaacagacctttgttgcacaaggagcacaagacaaaag
cacgtagcgtcgaaggcggggacgccacccgcagacagccgtcgcaccgagacgggggca
ggacgcccggacagccgtgacacggacggagaacgcagggagaccggtcacgctggcgcg
gagacagggcgcacggagaaccgcgtggaagacgccgaaaccgaacgcgagtggaacggc
aggtcggaaacagatacagaggcagcagcggaacacccggagaacctccaccctgacgca
gaaccagaggcaggagcacgacacgaggagaacaatcgcacaggaaccgagatggagagc
gagaaccctgggactggcaccgagacggaggcagggcacacagctacacacttcacagaa
gcgaagaccaaccccacaaggaaagtgactgaaaacgggtgtgatgactccgaccatgct
aataccaccagagctaaccctgtgaagaggttagaggaagactctgaactccatatgaga
tgctcggaacctaccgaggagacaaacgacgagggtcacagtcaaggggatcctgacaaa
gacctggacccgggccacgtgaatgcgggtgagtcagactaa
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