Osmerus eperlanus (European smelt): 134032603
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Entry
134032603 CDS
T10927
Symbol
rnf20
Name
(RefSeq) E3 ubiquitin-protein ligase BRE1A isoform X1
KO
K10696
E3 ubiquitin-protein ligase BRE1 [EC:
2.3.2.27
]
Organism
oep Osmerus eperlanus (European smelt)
Brite
KEGG Orthology (KO) [BR:
oep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
oep04121
]
134032603 (rnf20)
Enzymes [BR:
oep01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
134032603 (rnf20)
Ubiquitin system [BR:
oep04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
BRE1 proteins
134032603 (rnf20)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRE1B
CC_Bre1
zf-C3HC4
zf-C3HC4_3
zf-C3HC4_2
zf-RING_UBOX
BRE1
zf-RING_5
Bacillus_HBL
zf-RING_2
SOGA
HAT1_C
zf-rbx1
Motif
Other DBs
NCBI-GeneID:
134032603
NCBI-ProteinID:
XP_062332593
LinkDB
All DBs
Position
13:4257356..4270729
Genome browser
AA seq
1042 aa
AA seq
DB search
MSGLKRPSEPSGGPSSLGAPPEKRRDREGGEDVVQGVSATAGGSTAVETVIKLGGVSNLE
EQDVKALQAKNRKLGESLDQRQVIEDELRERIERLETRQATDDASLLILNRYWNQFDDNV
RLIARQYDQSGSEPMETPAGEGRSLKPDTPEPDGDSNQERTKGRGPSGEAATSFLATLAS
SSSEEMEAELKERVESSQKQANRVVEIYDCLQSTVEQLQRETDSGAEGSVWQVAAQLNTL
LSNENERLRQLIGDLEQRHSHMTSESRPLGRAVAKADTRVSELQALIEELQWDMEKIRRR
ENRLNTHLGEILERVNSKGYKVCGEASSVCGTITINKRKFEDMNSELEENRELAENRLSE
LQRLQQDLQNVNQENNNMKPCPRMTLVPGWYSVSYSELELELLSRAEGVVRDSSEYRCLQ
SQFSVLYNESLVLKGQLDETRTRLNTTRTARLRQLEHMENDEVSLQRKVRTEVFQLEDTL
AQVRKEYEMLRIEFEQTLAANEQAGKQRSLALLHSHAGPINREMRHLISTLQTHNQQMKG
EVVKFKLRLREAQADLSQARASKGSAVLQSQSSTELDVKEETTSPLPVTATGDVTVKAES
DNGSATPTSTGASVKTEPGTEADGVKEEDNEKVKKEEKEKEREKEKERPLRGGGGAVKEE
KEKAGSSNQSEEVAGERPPVIGGPKRKEVEQLKIVRTELKKAQESQREMKLLLDMYRSAP
KEQRDKVQLMAAEKKAKSEAEELKQRLRDLEERERREGKKMADEEALRKIRSVEEQIDIL
NKKLSLAKQEEDALLSEMDVTGQAFEDMQEQNIRLMQQLREKDDANFKLMSERIKSNQIH
KLLKEEKEELADQLLTLKTQVDAQLQVVKKLEEKERLLQGTIGTAERELALRTQALDMNK
RKAQESLLLSEEGRAQLEQVQQRLSTVREEVIENSISREKESFNSRRAQEDISKLRRKIE
KAKKPAENVRNGDEILNEEINEYKARLTCPCCNSRVKDAVLTKCFHVFCFECVKTRYDTR
QRKCPKCNAAFGANDFHRIYIG
NT seq
3129 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggactgaagcgtccgtctgaacccagcggcgggccttcctcgttgggcgcaccc
cctgagaaacgaagggaccgggaaggtggagaagatgtggttcagggtgtcagtgccact
gcgggggggagtaccgccgtggagaccgtcatcaagctgggaggggtgtccaacttggag
gagcaggatgttaaagctctccaggctaagaacaggaagctgggagaatccctcgatcaa
agacaggtaatagaggatgagctgagagagagaatcgagaggctggagactcgtcaagcc
acggatgatgccagtctactaatcctcaacagatactggaatcagtttgatgacaatgtc
aggctgattgccaggcagtacgaccaatcaggaagcgagccgatggaaacgccagctggg
gaggggcggagcctgaagcctgatacccctgaaccggatggagactcaaaccaggagagg
accaaaggtagaggcccctcaggggaggcggccacctccttcctggccacgctggccagc
agcagcagtgaggagatggaggcggagctgaaagagagggtggagtccagccagaagcag
gccaatcgtgtggtggagatctacgactgcctgcagagcaccgtggagcagctgcagagg
gagacggactctggcgctgaggggtctgtctggcaagtcgccgcccagctcaacaccctg
ctgtccaatgagaacgagcggctgcgtcagctgatcggggacctcgagcagaggcacagt
cacatgaccagtgagtcccggccccttggtcgtgcggtagccaaggcggacacgcgcgtc
agtgagctgcaggctctgatagaggagctgcagtgggacatggagaagatcaggcggcga
gaaaaccgcctcaacacacacttgggagaaatactggagagggtaaacagtaaaggctac
aaggtgtgtggggaggccagtagtgtgtgtggaaccatcaccatcaacaagagaaagttt
gaagacatgaacagtgagttggaggagaaccgggagctggcggagaaccgtctgagtgaa
ctgcagagactgcagcaggacctgcagaacgtcaaccaggagaacaacaacatgaagccc
tgccccaggatgaccctggtgccaggctggtactcagtcagctatagtgaattggagctg
gagttgctgagtcgtgctgagggggtggtgagggacagctctgagtaccgctgtctccag
tcccagttctccgtcctctacaacgagtccctggtcctgaagggccagctggatgagacc
cgcacccgcctcaacaccaccaggaccgcacgcctgcgccagctggagcacatggagaat
gacgaggtgtctctccagaggaaggtccgtaccgaggtgttccagctggaggacaccttg
gcccaggtccggaaggagtacgagatgctgaggatcgagtttgagcagaccctggcggcc
aacgagcaagccggtaaacagcgcagcctcgcactgctccactcacacgcaggtcccatc
aacagagagatgcgtcacctgatcagcaccctgcagacccacaaccagcagatgaagggg
gaggtggtgaaattcaagctgagactaagagaggcccaggccgacctcagccaggctcgc
gcttcgaagggcagcgccgtgctccaatcacagtctagcacggagctggacgtgaaggag
gagaccacctcccctctgccggtgaccgccaccggtgatgtcacagtgaaggcggagtct
gataatggatcggccactcccaccagcacaggggcctctgtgaagacagagccgggcacg
gaggcagacggagtgaaggaagaggacaacgagaaagtcaagaaggaggagaaagagaag
gagcgagagaaggagaaggaaaggccgctgcgcggaggaggcggggccgtgaaggaggag
aaggagaaggccgggagtagcaaccaatcggaggaggtggccggcgaacggccgcctgtg
attggaggaccaaagaggaaggaggtggagcagctgaagattgtcaggacggagcttaag
aaggcccaggagtcccagagagagatgaagctgctgctggacatgtaccgctcggccccc
aaagaacagagggacaaggtgcagctcatggctgcagagaagaaggccaaatcagaggcg
gaggagctgaagcagcgactgagggacctggaggagagggagaggagggaggggaagaag
atggctgatgaggaggccctgaggaagatccgctctgtcgaggagcagatcgacatcctc
aacaagaagctctccctggccaagcaggaggaggacgctctcctgagcgagatggatgtg
acgggccaggcgttcgaggacatgcaggagcagaacatccgcctgatgcagcagctgagg
gagaaggacgacgccaacttcaagctgatgagcgagaggatcaagtccaaccagatccac
aagctgctcaaggaggagaaggaggagctggccgaccagctgctcaccctcaagacccag
gtggacgcccagctgcaggtggtgaagaagctggaggagaaggagcgcctcctgcagggc
accatcggcacggcggagagggagctggctctgaggacccaggccctggacatgaacaaa
cgcaaggcccaggagtccctgctgctgtcggaggagggccgcgcccagctggagcaggtg
cagcagagactcagcaccgtcagggaggaggtgatcgagaacagcatctccagggagaag
gagtccttcaactcccgccgcgcacaggaggacatctcgaagctgaggaggaagatcgag
aaggccaagaaaccggccgagaacgtccgcaacggagacgagatcctgaacgaggagatc
aacgagtacaaggctcgcctgacctgcccgtgttgcaactcgcgggtgaaggacgccgtc
ctgaccaagtgcttccacgtcttctgcttcgagtgcgtcaagacgcgctacgacacccgg
cagaggaagtgccccaagtgcaacgcggccttcggcgccaacgacttccaccgcatctac
ataggatag
DBGET
integrated database retrieval system
