Osmerus eperlanus (European smelt): 134032708
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Entry
134032708 CDS
T10927
Symbol
upf3b
Name
(RefSeq) regulator of nonsense transcripts 3B
KO
K14328
regulator of nonsense transcripts 3
Organism
oep Osmerus eperlanus (European smelt)
Pathway
oep03013
Nucleocytoplasmic transport
oep03015
mRNA surveillance pathway
Brite
Messenger RNA biogenesis [BR:
oep03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
134032708 (upf3b)
mRNA cycle factors
P-body specific factors
134032708 (upf3b)
BRITE hierarchy
Other DBs
NCBI-GeneID:
134032708
NCBI-ProteinID:
XP_062332717
LinkDB
All DBs
Position
13
AA seq
481 aa
AA seq
DB search
MKEDKENTRPREKRVELKGEDVEKTEKPKEKKEAMTKIVIRRLPPSLTKEELEEQLQPLP
EVDYLEFFSSDTSMYPHLFARAYINFKNQEDIVLFRDRFDGYVFIDNRGQEYPAIVEFAP
FQKIAKKRSKKRDAKSGTIDEDPEYKKFLEYYNADDEKFTSTPETLLEEIEAKSKELVAK
KTTPLLDFLKNKQRIREEKKEERRRRELERKRLRDEDRRKWREEDRRKRKEVEKMKKGDK
SVEKEKDQAKEEPKIKLLRKPDRGDDFDSEKPKEKAKKPEKDKPMRDDRVSGGVDLRKRQ
NNENREDRGRKADDEGRKDFRERDVDRDRERERERRQKEKERIRRQDEDRRRRRERHDGE
NTYRKREEEAKKEKDRVWEKRKGDHAGDSIHERSERSSKDNRREENAKRDRLRNKDRPAI
QLYQPGARSRRGGGGGGGAGGGGGCGGGGGGGGGGGGGGESHAVERKPEHETKRVQDKGD
E
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atgaaagaggacaaggaaaatactcgtccaagagagaaaagggtggaattaaaaggcgaa
gatgtggaaaagacagagaagccgaaggagaaaaaggaggcaatgacgaagattgtcatt
cgtcgcttgccgcctagtctcaccaaggaggaactggaggagcagttgcagcctcttcca
gaagtagactaccttgaatttttctccagtgacacaagcatgtacccacacttgtttgca
agagcttacatcaatttcaagaatcaggaagatatcgttctcttcagagaccgctttgat
ggatatgtgttcatagacaatagaggtcaggaatatccagctattgttgaatttgcacct
tttcaaaagatcgcgaaaaaaaggagtaagaagagggatgctaagagtggaacaatagat
gaagatcctgaatacaagaaattcttggagtattataatgcagatgatgagaagtttaca
tctaccccggagactcttcttgaggaaattgaagccaaatctaaagaattagtagccaaa
aaaacaacacctttattggacttcctgaaaaataaacagagaatcagggaggagaagaaa
gaggagaggagaagaagagaactggagcgtaagaggttgcgggatgaggaccgtcgcaaa
tggagggaggaggacaggaggaaacgtaaagaggtggaaaagatgaagaaaggtgacaaa
tctgtggagaaagagaaagatcaggcaaaagaggaaccaaaaattaagctcctgagaaaa
ccagatcgtggagatgactttgattctgagaaacctaaagagaaggcaaagaagcccgag
aaggacaagcccatgagggatgacagagtttctgggggggtcgacttgaggaaacgccaa
aacaatgaaaacagggaagacagaggacgcaaagccgacgacgaggggcgtaaagacttc
cgggagcgggatgtagaccgagacagggaacgggagagagaacggcgtcagaaggaaaag
gagcggataagaagacaggacgaggaccggagaaggagaagggaacggcacgatggggag
aacacttacaggaagagagaagaggaggcgaaaaaggagaaagacagagtctgggagaag
agaaagggcgaccatgctggagactccattcatgagagatctgaaaggtcatctaaagat
aatagaagggaggagaatgctaaaagagacagattaaggaacaaggatcgacctgccatt
cagctgtaccagccaggggctaggagccggaggggtggtggtggtggtggtggtgctgga
ggaggaggaggatgtggtggtggtggtggtggtggtggtggaggaggaggaggaggagag
tctcacgctgttgaaagaaagccagaacacgagaccaaaagagtccaagacaaaggagat
gaatga
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