Osmerus eperlanus (European smelt): 134032759
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Entry
134032759 CDS
T10927
Name
(RefSeq) cohesin subunit SA-3 isoform X1
KO
K06671
cohesin complex subunit SA-1/2
Organism
oep Osmerus eperlanus (European smelt)
Pathway
oep04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
oep00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
134032759
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
oep03036
]
134032759
Chromosome and associated proteins [BR:
oep03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
134032759
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT_SCC3-SA
STAG
SCD
PDS5
Cnd1
AdoHcyase_NAD
DHR-2_Lobe_C
Motif
Other DBs
NCBI-GeneID:
134032759
NCBI-ProteinID:
XP_062332797
LinkDB
All DBs
Position
13:complement(14313486..14331484)
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AA seq
1211 aa
AA seq
DB search
MAQSDESSQASSEETFDMSDSDSDFEVEFRSTKERKRNVTNAHGPVPPKRPRRKAASQPS
SRSGPGLSPTPPASSPQLPSHGTPRPVSPKPLSPRQERRGNKDRQFICAGDMYEAIRSGK
SAVVTVVDEWLDGYKHDREAGLLVLINFVVQCCGCKGVVSREMFDSMQNAEIISTLTKEF
NEESVNYPLCTPGPQWKRFKAGLCEFFRVLVRSCQNSLLYDDYLFSSLLALLTGLSDSQV
RAFRHTSTLVAMKLMTALVEVAVTVFAQVKTTQRRYDVETTRSPEDRALGRLEELQANVS
QLLEHQEELSSMMNAVFRGVFVHRYRDLVPEVRAACITEMGEWLKENPTVFLNDGYLKYM
GWTLHDKQGLVRLQCVRALQGLYQEKDFIGRLELFTSRFKERMLSMVLDREPDVAVEAVQ
LLLLIQQRTEEGLSEEESSSVYPLVFAAHRGLASTAGAFLYHKLCSVMARDNEDQDMGAR
RAAFLNILVSFYTQSEFHEHGAYLVDSLWAVAASELRDWETMTSLLLLQETEPGQGPSDE
EEGALIELMMCAMRQAAEVHPPVGRAQGKKVLSMKDKKTQAQDRRRITAHFIPLLPQLLA
KYSADVEKVTSLLKAPLYFDLETYSSTSRLEKCLDVLLVQVWAVVEKHTDGGVLEACARV
ACALSSPRYTFSSRADLALSQLLDRLTDRFSSHLNDLLQGTADEDDVYSAANTLKRIAAF
SSAKDLTGWKLFEPCFKLLKSGTESTDMDKELMVPALTCAAFHLLWERQKVSCSTPSEVE
LKQLRKEFRSFCVVCQSCLSVAHAEIRDQSFELLCDLLLLFGLGSVRSQPALHSLALPPC
DPLRSEMAAFLLDHVFTEPEDHELAGEEEEAEVRISTLQRRRNQLAGYCKLVIYGVLDLS
AATDIFRHYSKFYKDYGDIIKETLCKTRMMSPVQSARTLCLSLQQMFTAEVSEEQGAGDL
GEIRDLARRLAMSFGIDLQRVRSPLLALHTDGIRFAFREAEDGDPPPNLAFLEILSEFSF
KLLRQDRAQILVFLKGECGSAAPSCQAVKMYHRSLQPGPSRSAEAPSPHSTPVAKRRRPS
PPGTVSSVSEEAWLDSSGVRGNLSGPTLTSTLERQPAAHASYAPSIVSEAESDDFSEGSM
MRRVEPNRRAQPSPSELDSHLTLPVFLRLTLIEEDEQEVDIDEFESNDSDSGTAITLPST
RRSTSYLEDLF
NT seq
3636 nt
NT seq
+upstream
nt +downstream
nt
atggctcagtcggatgaatcaagtcaagccagctctgaggagacattcgacatgtccgat
tcagacagtgactttgaggtcgaattcagatccacgaaggagagaaaacggaatgtcacc
aacgcacatggacctgtgccacccaagagacccaggcgcaaagctgcgtcccagcccagc
tccaggtctggccccggcctgagccccacccctccagcctcctccccccagcttccctcc
catgggacccccaggccagtctcccccaaaccgctctcccctaggcaagagaggcgaggc
aacaaggacagacagttcatctgtgcaggagacatgtatgaagccatacgctctggaaag
agtgccgtggtgacggtggtggatgagtggctggacggctacaagcacgaccgagaggcg
ggcctcctggtgctcattaactttgtggttcagtgctgcggatgcaaaggtgtggtgagc
agggagatgtttgacagtatgcagaacgcagagatcatcagcaccctgactaaggagttt
aacgaggagtctgtaaactaccctctgtgcacccctggcccccagtggaagcgcttcaag
gcggggctgtgtgagttcttcagggtgctggtgcgctcctgccagaacagcctgctctac
gacgactacctgttctcctccctgctggctctgctcaccggcctgtctgactcgcaggtc
cgagccttcagacacaccagcaccctggtcgccatgaagctgatgacggcgctggtggag
gtggcggtgacggtgttcgcccaggtgaagaccacgcagagacgctacgacgtggagacg
accaggagcccagaggacagagccctgggcaggctggaggagctccaggccaacgtcagc
cagctgctggagcaccaggaggagctgtcctccatgatgaacgcagtgttccggggggtg
ttcgtgcaccgctacagagacctggtgcccgaggtccgggccgcctgcatcacagagatg
ggggagtggctgaaggagaaccccactgtcttcctgaacgacggatacctcaagtacatg
ggctggaccctgcacgacaagcaaggtctcgtgcgtctgcagtgtgtgcgtgccctgcag
ggtctgtaccaggagaaggacttcattgggcgcctggagctcttcaccagcaggttcaaa
gagaggatgctgagcatggttctagacagggagccagacgtagcggtggaagccgtccag
ctgctgttgctcatccaacagaggacagaggagggcctctctgaggaggagagcagcagt
gtgtatcctctggtgtttgcagcacacagaggcctggcctcaactgctggagctttcctc
taccacaagctgtgcagtgtgatggccagggataatgaggatcaggatatgggagctcgt
agggctgcgtttctcaacatcctggtgtccttctacacccagagtgagttccatgagcac
ggggcctacctggtggacagcctgtgggccgtggcagcttcagagctgagggactgggag
accatgacatcactgctgctgctgcaggagacagagcctggccagggtccgagcgatgag
gaggagggggcgttgatagagctgatgatgtgtgccatgaggcaggcagcagaggtgcac
ccccctgtggggagggcccagggcaagaaggtcctcagcatgaaggacaagaagacgcag
gctcaggacaggaggcgcatcacggcccacttcatccctctgcttccccagctcctggct
aagtactctgcagacgtggagaaggtgaccagcctgctgaaagcaccgctctactttgac
ctggagacctacagcagcaccagcagactggagaagtgtctggacgtgctgctggtgcag
gtgtgggccgtggtggagaagcacacagatgggggcgtgctagaggcgtgtgcccgcgtg
gcctgcgccctctcctccccccgctacaccttctcctcccgggcggacctggctctcagc
cagctgctggaccggctcacggacagattcagctcccacctcaacgacctgctgcagggg
actgctgatgaagatgatgtgtacagtgcagccaacaccctgaagaggattgcagccttc
agcagtgccaaggacctgacaggctggaagctgtttgagccctgcttcaaactcctgaag
agcggaacagagtccacagatatggacaaggagctcatggtacctgctctgacgtgtgca
gccttccacctgctctgggagagacagaaggtgtcctgctccacaccctctgaggtagag
ctgaagcaactgaggaaggagttccgctcgttctgtgtggtgtgtcagagctgtctgtct
gtggcccatgcagagatcagggaccagtcgtttgagctgctgtgtgacctgctgctgctg
ttcgggctgggctctgtgaggtctcagcccgccctgcacagcctggctctccctccctgc
gacccgctccgctctgagatggctgccttcctcctggaccacgtcttcaccgagcctgaa
gaccatgagctggcaggtgaggaggaggaggctgaggtcaggatatccactctgcagcgc
aggaggaaccagctggcgggctactgtaagctggtcatctacggagtgctggacctcagc
gcagccaccgacatcttcagacactacagcaagttctacaaagactacggtgacatcatc
aaggagacgctgtgtaagaccaggatgatgagtccggtgcagagcgccaggacgctgtgt
ctgagcctgcagcagatgttcacagcggaggtgtctgaggagcagggagctggtgacctg
ggggagatcagagatctggcccggcgtctggccatgagcttcggcatcgacctgcagcgc
gtacgcagccccctgctggccctgcacaccgacgggatccggtttgcgttccgggaggca
gaggacggggacccgccccctaacctggcgttcctggagatcctcagcgagttcagcttc
aagctcctccgtcaggaccgcgcccagatattggtgttcctgaagggtgagtgtggctct
gctgccccctcctgtcaggctgtgaaaatgtaccatcgctccctgcagcctggcccctcc
aggagcgctgaggccccgtccccccacagcacgcctgtggccaagcgcagacgaccctcc
ccccctggcacggtgtccagtgtgagtgaggaggcgtggctggacagcagtggtgtgagg
ggcaacctgtctggccccaccctcacctccaccctggagaggcagcccgccgcccacgcc
agctacgcacccagtatcgtctccgaggcagaatctgacgacttctcagaggggtcaatg
atgcgcagggtggaacctaacagacgtgcccagcccagcccctctgagctggactcccat
ctcacacttcctgtgtttctcagactcaccctgatcgaggaagatgagcaggaggttgat
atagacgagtttgagagcaatgattctgacagtgggacggccatcaccctgccctcaaca
agacgctccacgagttacctagaggatctgttctag
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