Osmerus eperlanus (European smelt): 134033027
Help
Entry
134033027 CDS
T10927
Symbol
vimr2
Name
(RefSeq) peripherin isoform X1
KO
K05640
glial fibrillary acidic protein
Organism
oep Osmerus eperlanus (European smelt)
Brite
KEGG Orthology (KO) [BR:
oep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oep04131
]
134033027 (vimr2)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
oep04812
]
134033027 (vimr2)
Membrane trafficking [BR:
oep04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Other CMA associated proteins
134033027 (vimr2)
Cytoskeleton proteins [BR:
oep04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Type III
134033027 (vimr2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Filament
Filament_head
FlxA
DUF4047
BBP1_C
CENP-F_leu_zip
AIF-MLS
DUF2721
TPR_MLP1_2
Motif
Other DBs
NCBI-GeneID:
134033027
NCBI-ProteinID:
XP_062333118
LinkDB
All DBs
Position
13:8286487..8296464
Genome browser
AA seq
386 aa
AA seq
DB search
MTMLRVSSYRRLFEEEQWARSGGSSMQCAEEYRSPARGAAGHKCECEQLDFVAAKAINKE
GLSRFTQDRTILAALNNRLATLIELARCFEEENESLETQILALEDRLSSQQASSTSTAIA
VPDYSLDAVVERLRKEKEEILGVTEELRSELECLQQEHQKAVQQRTLVQEQREDVAMDVD
AVTAECLALREQVCIYEEQLANMEAQHATTVETLAEPAEGAEGAMTAVEFCSPDITPALQ
IKEYYCQLAESLQYECGMSSAVVAVGNGQQGELASGSRGTDVSKITDVNELKKQIGELEK
ELIELEKCNEELEDEGEMKKAEYLEQIEELECRIEEMGYKQEDLDIQMKQQCEEYQDLLS
EKMARDIEIAAYRGLVEEEDERLCYL
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atgaccatgctcagagtgtcgtcgtaccgcaggctgtttgaggaggagcagtgggctcgc
tctggaggctccagtatgcagtgtgctgaagagtaccgctccccagccaggggtgcggct
ggccacaagtgtgagtgcgagcagctagactttgtggctgccaaggccataaacaaggaa
ggcctgagtcgtttcactcaggatcgcaccatccttgccgccctcaacaatcgcctggcc
accctcattgaattggcccgttgttttgaggaggagaacgagtccctggagactcagatc
ctggctctggaggacaggctgagcagccagcaggcctcgtccacctccaccgccatcgct
gtccccgattacagcctggacgctgtggtggagagactgcgcaaagagaaggaggagatc
ctgggtgtcacagaggagctgaggagtgagctggagtgtctgcaacaggagcaccagaag
gccgttcagcagaggaccctcgtccaggagcagagggaggacgttgccatggatgtggac
gcagtgacagctgagtgcctggccctcagggagcaggtttgcatctacgaggagcagctt
gctaacatggaggcccaacatgccacgacggtggagactctggcggagcctgctgagggg
gcggagggagccatgacagcagtggagttctgtagccctgacatcaccccagccctgcag
atcaaggagtactactgccagctggctgagagcctgcagtatgagtgtggcatgtcctcc
gctgtggttgccgttggaaacgggcagcaaggggagctggcttccgggtcaaggggcacg
gacgtctccaagattaccgacgtcaatgaactgaaaaagcagatcggggagctggagaaa
gagctgatcgagttggagaagtgcaatgaagagctggaggatgagggagagatgaagaaa
gccgaatacctggagcagatcgaagagttggagtgtcgtattgaggagatggggtacaag
caggaggaccttgatatccagatgaagcagcagtgtgaggagtaccaggatctcctcagt
gagaagatggccagggacatcgagatcgctgcctacaggggattggtggaggaagaggat
gagaggctgtgctacctgtga
DBGET
integrated database retrieval system
