Osmerus eperlanus (European smelt): 134033207 Help Entry 134033207         CDS       T10927                                  Symbol dchs2 Name (RefSeq) protocadherin-23   KO K16507   protocadherin-16/23 Organism oep  Osmerus eperlanus (European smelt) Pathway oep04519   Cadherin signaling Brite KEGG Orthology (KO) [BR:oep00001]  09130 Environmental Information Processing   09133 Signaling molecules and interaction    04519 Cadherin signaling     134033207 (dchs2)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04515 Cell adhesion molecules [BR:oep04515]     134033207 (dchs2) Cell adhesion molecules [BR:oep04515]  Cadherins   Cadherin related    134033207 (dchs2) SSDB OrthologParalogGFIT Motif Pfam:  Cadherin Cadherin_FAT4_N Cadherin_CELSR2_9th Ig_CLSTN Ig_Cad99C_N RET_CLD1 Mannosidase_ig DUF6916 Motif Other DBs NCBI-GeneID:  134033207 NCBI-ProteinID:  XP_062333245 LinkDB All DBs Position 14:9607031..9633442 Genome browser AA seq 3289 aa AA seqDB search MYKRRKSRQNVSTSLLQLLSLSILWTQSLAQVYNLSLSIEEGLPARTIVGDISEGLATPS SGFFISESRDSYVFKDLEIDVDSGIISTATVLDRESRDKYEFVAATLSGEMVKVKIMVHD VNDNFPVFSTEKVELNVSELCPPGTRFELEGAQDRDEGYFGTQGYHITDSEVGDLFKVEY RHGGENVLNLDLILMDKLDRETRDSYSLTVEAFDGGVPPKTGKLQVHIHVLDENDNPPMF NQTEYQASVYEDAPVMSPVCQLLATDLDLGVNGLVTYEINRRQSDPNEVFVINGTTGVIH VNKPLDFEAQAFYELIVSARDNGAQPEYSSTFVAVKVLDVNDNSPTINILFLSESGDPEV SEWAGIGEYVARISVTDPDLGEIERVRVTLEGGDGKFTLKQTDDFLYALCVDGGLDRENE DLYELKVVAYDYGAPPLRSEMTFALKVTDANDCRPAFDKSVYAVSVAEDVPPGSSLVQVQ ARDGDHGVNSAIRYSILKSSQDHLVSIDPTSGLVTTATWLDREREGEVRFLVVAVDGGEP PLSSTATVTVVVDDVNDNEPVFQQQLYNVSIPEHTEIGSCFLQVVATDADGRDFGTVRYS VSDGFEKEDKHPLFNIHPETGELCVSQDMDRDAGPAAHDILVKAEDQGGLSAQTYVHIEV EDLNDNRPVFNPDRYTTSISSHAQPGTEILNVIASDRDLGAFGRVSYELLPGDLSSMFSV EQTSGVVYLTSTLTHLGTATVKLVMTAHDGEGLSAVRPAEVTVNILSSAQAPAVFQRSRY AFTIPEDAPPGTSVGTVEAFNPANSVESLSYRISSGDPQGLFWVDPESGLISTSQALDHE SQPYALLVLQTHSGNSPVYSSAQVNVTVADINDNAPVFPKAANAVAVSQNTLPGTVLFIA HAHDLDSGANGRVRYSIPPDGDSRTGAFVVDADLGTVSLNRSLSRDMQPTYTFEILAKDG GVPSLTSTLTLVVNIDRSATEDTVTFETLVYQVEIGEGTHKDARVIQVRAHRSGRSMHAA KHALSYFLEPEAGFPPPPFRVHPDSGWLYLSKSLDYETEPMFRFRVLATAKEANRASEAP LANSTATATVIVLVLDENDNTPVFSDEAYFFSVQEGPSPQGLVGTVNAVDKDSRKNAQLS YILLSDGKHFRINAKTGEIINWVSLDREQQSQHALKVMVTDQGHPRLNATATVHILVTDV NDNPPQFTHMPAGKELNVQVWAGQPAGTLVTSIFAKDLDAGENGTVHFSLLTEDDLGHFE IDSGSGDITTTWRFSQNSQTHYTLTVVAHDGGHTPLEERALIHLQVNAAERQSNGAGLQG VRHFSVREDTKPGSVIGSVQLPANGRMHYSISEGDGSLHFGIDSSSGDLYVHQPLDYEAA VGYFLVVRAEDTRLTSGVNVSAVVSVTVEDVNDHTPWFQDDVITFAVREDTPVGTPVFTF NAKDGDGSLPNSVIRYSLNLDPKLGSGSSTPLPFHIHPLTGTLSTAGPLDRESIQSFAFT VTATDQAEKVVDRKWTTVTAQVFLLDVNDESPAFVSSETARVMEDAQVGSLVHHVRAVDG DLGNSGLVTYSVVAGNEDGLFTLEERTGLLYLASPLDYESHISHSLTIQAQDHGLPPLSS AQTLTMEVGDVNDQAPLFQQEVYSATVAENREPGEPVVRVSAVDMDSEENAVVWYSLLPG PGYELFTINPHTGLISTTDPLDREQQQHFTLRVRARDSALQPLSSVAVVMCSVQDDNDNP PEFMLSSFQISLPENLPPGVIHTAQAYDPDQGDNGSIRYSILGEDYDGRFSIHSTTGAVS TTRVLDREERVNYTLILMAHDSGPSPLSASTQLHLLLLDENDHSPAFGRKSYRASVSEGL PAGTEVLRLSALDPDEGPNGEVSYSLAEDSLGVFSVDASTGAIRTTRPLDRESRGQYVLR AVATDGCARGPRSSATSVTVLVEDTNDNTPVCGRNPVNAWIGGGDTAVANRTVATVTATD TDRGENGTVRFSLAGDSDVFDVGVTSGRIWLKTALRAGFSGTKLRVLAEDQGQPALTSTC LVLIHLKGEEEGLQFTQKDYQATVVENSQIGTWVVRVEAFDQTNEGSRVEYSIFSGNRNG AFVINRHTGDISVSQEILDYEESRRAELVVLGDSGLRTAHCRVTVNLQDANDNAPAFEQS YYRTAVWEGQVHNTYIMQVLASDADSSTNSQVEYSILSGNHNDAFIIDSVRGILATNTVL DREITSSYKLVLQASDRGSPALTGTSIVRVQVVDVNDNSPAIPPMQPVVMAENLPVGYMV MQVSANDVDLNSIVTYSFSDNSTTNGSFAIDRYTGLVTLTRSLDHEEQTEHTLRVWASDS LHKTTGEVKVQVLDVNDNAPIFSQESYQVELPELASARTLVLTVSATDRDSGLNGKVTYR LLSSPLQGFYIHADNGSVFTNKPMKYVTNGDTIQLLIEASDGGDPVRSTVISMDIQVLDT NDHAPLFTQDAYSTFVPEDSPVGTTLLTLSAEDADLAPENTHLDYVITGGNDERRFCMEV SAVQMENQQKTVGRLVLCEPLDHETKDSYAVTVTVSDHGTPPLNSSVVVSVNVTDVNDNA PVFVHADYHAQVSESSTSGTRLVQVAAHDADQGTNGVVRYDIISGNSKGHLRLNPHTGVL EVSQPLDYEEDSKYTLAVQASDGGHSGKRKVAFTVVFVTVLDENDNSPYFMFPMVNCSVL ENLPAFTPACSVRAMDNDAGPYGMITYSILSSCFMDYGSGSPDRKEAFAIDALTGDIHTR QTFDYERESEYCFVVEARDKGDKVATVRVQVAVKGMDEFSPVFTQRHYRFVLPGNTKPGQ TVGYVMAMDHDGGLDGLVEYSLIDPSPFFAINKTTGAIFTSGPVYRRRGSLAGEDLVEVL VSASSPRLDSRSTTSLVSINISSSAEAQTGVPLDIQTISLTVSLAMFLLILISFVALVLR YKTKDAAIKKAAAIAANLNNGSGTFGRSGRQPHNVIGLHELRPMNMRAKREVPNLYRKSN SSGRGSAEGETAEDQEIKMINNYPCHERADSDRSETTLTVPDPAVPRDSDQLSCHSIDVG PSVLVQGTMPGNINMGTASSESLHTFREEGGGEGMLPRVLRVKDIEEGMRTRGYVQLSKG QVPVDSSMTSLLCPEEQLRGSYSWDYLLDWEPSYQTMASVFTDISLLPDEELQGGHEGLA AEVPSLMHPPPLITGVAQSGIRAVPPRMPQPTSRAHTLSRRPSYPKYAYSPLARNTGLTP SAMTPSFSPSLSLLTLRTPNASPVVSETGLGSVRLDSLTASLLEAEIQV NT seq 9870 nt NT seq  +upstreamnt  +downstreamnt atgtacaaacgaagaaaaagtcgacagaatgtgtcgacttcgcttcttcaactgctgtcc ctctctatcctatggacgcagtcacttgcccaggtgtataaccttagtctctcaattgaa gaaggactacctgcaagaactattgtcggtgatataagtgaaggcttagcaacgccgagc agtggattttttatttctgaaagcagagattcttatgtttttaaagatttagaaatagat gtagactctggaatcatttctacagccacagttttggacagggagagtagagacaagtac gaatttgtggctgccacgctctcaggtgagatggtaaaagtgaaaataatggttcatgat gtgaatgacaatttccccgttttctcaactgaaaaggttgagttgaatgtgtcagaatta tgtcctcccggaacccgctttgaacttgagggggcacaagatagggatgagggatatttt ggaacccagggataccacataactgacagtgaagttggagatttattcaaggtggaatat cgccatggaggagagaacgttctaaacctggatctcatccttatggataaattagacaga gagacaagagattcttactcgctgactgtggaggcatttgatggaggggtccctcctaaa actgggaaacttcaggttcatattcatgttttggatgaaaatgacaacccacctatgttc aaccaaaccgaataccaagcctcagtgtatgaagatgctcctgtgatgtcacctgtgtgt cagcttttagctacagatctcgacctcggggtcaacggccttgtcacatacgagataaac cggcgtcaaagtgacccaaacgaggtgtttgtcatcaatggaaccaccggtgtgatccac gtcaacaaacctttagatttcgaggcccaagccttctacgagttgatcgtcagcgccagg gataacggcgcccagccagagtacagcagcacctttgtggccgtgaaggtgctggatgtc aacgacaacagcccaaccatcaacatcctgtttctcagtgagagcggcgaccccgaggtg tcggagtgggcaggcatcggggagtatgtcgcccggatatccgtcactgaccctgacctg ggggagattgagagggtcagggtcaccctcgaagggggtgatgggaaattcacgctgaag cagacagacgacttcctgtacgccttgtgtgtggacggcgggctggaccgggagaacgag gacctgtacgaactgaaggtcgttgcctacgattacggagccccgcctctgaggagtgag atgaccttcgcgctaaaggtgacagatgccaatgactgccgcccggcttttgacaagagc gtctacgcggtgagcgtagccgaggacgttcctccaggaagttccttggtccaggtacag gccagagacggcgaccatggggttaactctgccattcgatattccatcctcaagtcaagc caggaccacctggtcagcattgaccccacttccggcctggtcaccacggcgacgtggttg gaccgggaacgagagggggaagtgcggttcctggtggtggcggtcgatggaggggagccc cccttgtcctccacggcaacagtaaccgtggtggttgacgacgtcaacgacaatgagcct gtgtttcaacagcagttgtacaacgtgtccatcccagaacacacagagattgggagctgc ttcttacaggtcgttgccacggatgcggacggtcgtgattttgggactgtgcgctactct gtctctgatggttttgagaaggaggacaagcaccctcttttcaacatccaccctgagacg ggagagctgtgtgtctcccaggacatggacagagacgcgggcccggctgcacatgacatc ttggtgaaagctgaggatcagggaggcctgagtgctcaaacctacgtccacatcgaggtg gaggacctgaacgacaaccggcctgtgttcaaccccgaccgctacaccaccagcatcagc agccacgcccagcccggcacagagatcctcaatgtcatcgcctccgacagagacctgggg gcgttcggccgcgtctcctatgagctgctgcccggagacttgtcttcaatgttctctgtg gagcaaacatcgggcgtggtatacctgacttccaccctcacccacctgggcaccgccaca gtgaagctggtcatgactgcccacgacggcgaaggcctgtctgctgtgcggcccgcagag gtcactgtgaacatcctgagcagtgcccaggctcccgccgtgttccagaggtcacgttac gccttcaccatccccgaggacgcccctcctggcacctcggtgggcaccgtggaggccttt aaccctgccaactctgtggagtccctgtcctaccggatctcgtccggggacccccagggc ctgttctgggtggaccctgagtctggcctgatcagcaccagccaggccctggaccacgag tcccaaccctacgccctgctggtgctccagacccactctgggaactcccccgtgtacagc agcgcccaagtcaacgtcacagtggccgacatcaacgacaacgcccccgtctttccgaag gcggccaacgcggttgccgtttcgcaaaacacgctgcccggcacagtgttgttcatagct cacgcccacgacctggacagcggcgccaacgggagggtgcgctacagcattccaccggat ggcgacagcaggaccggagcattcgttgtagacgccgacctggggacggtgtctctaaac cggagcttgtcccgggacatgcagcccacgtacacgtttgagatcctggctaaagacggg ggagtgccatcgctcacctcaaccttgactcttgtggtcaacatcgaccgcagcgccaca gaagacacggtgacgttcgagacattggtctaccaggtggagatcggagagggtacccac aaagacgccagggtcatccaggtgagggcccacaggagcgggaggagcatgcacgccgcc aagcatgcgctctcctacttcctggaaccagaggcgggattcccccctcctcctttccgc gtacaccctgacagcggttggctgtacctctccaaaagcctggactacgagacggagccc atgtttagattcagagtgctagccaccgctaaggaagctaaccgtgctagtgaggctccg ttggctaacagcacagccacagccacggtcattgtgctagtgctggatgagaatgacaac accccggtattcagcgatgaggcctactttttttccgtccaagagggtccatctcctcag ggtctggtcgggacagtcaacgcggtggataaggactccaggaagaacgcccagctgtcc tacatcctgctgtccgacgggaaacacttccgcatcaatgccaagacaggtgagatcata aactgggtgtctctggaccgtgagcagcagagccagcatgctctgaaggtgatggtgacg gaccagggtcaccctcgactcaacgccaccgccaccgtgcacatcctggtcacggacgtc aacgacaacccgccgcagttcacccacatgcctgccggcaaggagcttaacgtccaggtg tgggctggccaacctgctggtaccttggtcacctccatatttgccaaagacctggatgca ggagaaaatgggacagtgcacttctctctgctcacagaggacgatctgggccactttgag attgacagtgggagcggagacatcacaaccacctggcgcttttcccagaacagtcagacg cactacaccctcactgtggtcgcccacgacggaggccacacccctctggaggagagggca ctcattcacctccaggttaatgctgcagaaagacagtccaatggtgctggccttcagggt gttagacacttctctgtgagagaggacaccaagcctggctctgtgattggctctgtccag ctcccagccaacgggaggatgcactactccatctccgagggtgatggcagcctccacttt ggaatcgacagttcttccggtgacctgtatgttcaccagcctctcgactacgaggccgcg gtgggctacttcctggtcgtgcgggccgaagacacgaggctgacctcgggcgtgaacgtc tcagcggtcgtcagcgtgactgtggaagacgtcaacgaccacacgccctggttccaagac gacgtgatcacgttcgctgtgagggaggacacaccggtcgggacacccgtgttcacattc aacgctaaggacggtgacgggagcctacccaacagtgtcatccgctactccctgaacctt gaccccaagctgggttcagggtcctccacaccgcttccatttcacatccaccctctgacc ggtaccctgagcacggccggccccttggaccgcgagagcatccagagtttcgcgttcacg gtcaccgccacagaccaagctgagaaagtggtcgaccggaagtggaccaccgtgacggcc caggtgttcctgctggacgtcaacgacgagagcccggcgttcgtgtcctcagaaacggct cgggtgatggaggacgcccaggtggggagtctggtgcatcacgttcgggctgtggatggg gacctgggaaacagtggcctggtcacctactctgtagtggctgggaacgaggatggcctc tttaccttagaggagagaacaggactgctgtacctggcctctcctctggactacgagtcg cacatctcccacagcctgaccatccaggcgcaggaccatggtcttcctcctctgtcctca gcccagacgctgactatggaggtgggggatgtgaacgaccaggcccccctcttccaacag gaggtctacagtgccacagtggctgagaacagagagcccggggaaccggtggtcagagtc tcggccgttgatatggattcagaggaaaacgccgtggtgtggtacagcctgctgcccggc ccggggtacgagctcttcaccatcaacccccacacaggcctcatcagcacgaccgacccc ctggacagggagcaacagcagcacttcaccctgagagtccgggctcgggacagcgccctt cagcccctctccagtgtggcagtggtcatgtgctcggtgcaggacgacaacgacaaccct ccagagttcatgctgtcctccttccagatcagcctgcctgagaacctccccccaggggtc attcacaccgcccaggcttacgaccccgaccagggagacaacggaagtatacgctactcc atactaggtgaggactatgacggccgcttcagcatccactccaccacaggagctgtgagc accactagagtcctggaccgggaggagcgggtgaactacaccctcatcctcatggcccat gactccgggccctcccccctcagcgcctccacccagctccacctcctcctcctggacgag aacgaccacagccccgcattcggccgcaagagctaccgcgcctctgtcagcgagggactg ccggcagggaccgaggtcctccggctcagcgccctggaccctgacgaagggcccaatggt gaggtgagctactccctggcggaggactccctgggggtgttctctgtggacgcctccacg ggggcgatcaggaccaccaggcccctggaccgggagagccggggccagtacgttctcagg gctgtggccacggacggctgcgctaggggcccgcggagctcggccacctcggtgaccgtc ctggtggaggacacgaacgacaacacgcccgtctgcggccgcaaccccgtcaacgcttgg atcggcggcggcgacacggcggtggccaaccgcacggttgccacggtgaccgccacggac accgaccggggcgagaacggaacggtgcggttcagcctcgcgggggactctgacgtcttt gacgtgggcgtgacgtcggggaggatctggttgaagacggccctcagagcgggcttctct gggacgaagctgcgggttttggcggaagaccagggacaaccagcgctgacctccacctgc ctggtcctcatccacctgaaaggagaggaggagggactgcagttcacacagaaagactac caggcaactgttgtggaaaacagccaaattggcacgtgggttgtcagggtggaagctttt gaccagactaacgagggctcaagggttgagtacagcattttcagcggcaacagaaacgga gcatttgtcatcaacagacacaccggtgacatatcggtgagtcaggagatcctggactat gaggagagccggcgagcagagctggtggtgctgggggacagcggcctgaggacggcccac tgcagggtcacggtcaacctgcaggacgccaacgacaatgccccggcatttgagcagagc tactaccgaacggccgtctgggagggacaggtccacaacacctacatcatgcaggtgttg gcatccgacgctgacagcagtacaaacagccaggtagaatactccatcctgtctgggaac cacaacgacgccttcatcattgactctgtgcgcggcatcctcgccaccaatactgtgttg gaccgtgagatcacatcgtcctacaagctggttctgcaggcctcagacagggggagccct gcgctcacgggcaccagcattgtgagggtacaggtggtggacgtcaacgacaacagtcct gccatcccccccatgcagcctgtggtcatggctgagaatcttccggttgggtacatggtg atgcaggtgagcgccaatgatgtagacctcaactccatcgtcacctacagcttctcggac aactccaccaccaatggcagcttcgccatcgaccgctacacggggctcgtgaccctgacc cgctccctggaccacgaggagcagacggagcacacactgagggtctgggcgtcggactcc ctccacaagaccacaggagaggtcaaagttcaagtgctggatgtcaatgacaatgctccc atcttctctcaggaatcctaccaggtggagttgcctgaactggcctctgccagaacgttg gtgctgactgtatcagctacagacagagactctgggctcaatggcaaggtcacctacagg ctcctgtcatctcctctacagggattctacatccacgcagacaacgggtcggtgttcact aacaaaccaatgaaatatgtcaccaacggcgacacgatccagctcctgattgaggcgagt gacggaggagaccccgttcgttccaccgtcatctccatggacatccaggtcctggacacc aacgaccacgccccactcttcacacaggacgcctactcgacatttgtcccagaggacagc cctgtgggcaccacactactgaccctctcagcagaggatgcagacctggcccccgaaaat acccacctggattatgtgattacaggcggtaatgatgagaggaggttctgtatggaggtc agtgccgtccagatggagaatcagcaaaagaccgttgggaggttggttctttgtgaaccg ctggaccacgagaccaaagacagctatgcagtgaccgttaccgtgtctgaccacggcaca ccaccgctgaacagctccgtcgtggtctctgtgaacgtgactgacgtcaacgataatgct cccgtgtttgtacatgcggattaccacgcccaggtgagtgagagcagcacttcggggaca cgattggttcaggtggccgcccatgacgctgaccaaggaaccaatggggtggttcgttat gatataatctcggggaacagcaaaggtcacctcagactcaaccctcacaccggtgtcctt gaggtcagtcagccccttgactacgaagaagactccaaatacaccctggccgtccaggct tcagacggtggccactctggtaaacgcaaagttgccttcacagtggtctttgtcacggtt ctggacgaaaatgacaactcgccttacttcatgttccccatggtcaactgctcggtgctg gagaacctgccagccttcaccccggcctgctccgtccgtgcaatggacaacgacgcaggg ccctacggcatgatcacgtactccatcctctcgtcctgcttcatggactacggaagcggc agcccggacaggaaggaggcgttcgccatcgacgcgctcactggcgacatccacaccaga cagactttcgactacgagcgtgagagtgagtactgctttgtggttgaggccagggacaag ggcgacaaggtggccacggtccgagtgcaggtggctgtaaagggaatggacgagttcagc cccgtcttcacccagaggcattaccgctttgtcctcccggggaacaccaaaccagggcag acggtcggctacgtgatggccatggaccacgacggagggctggacgggctggtggagtac tccctgattgacccctcgccattttttgcgatcaacaaaacaactggcgccattttcacg tccgggcctgtctaccgcaggagaggcagtctggccggagaagacctggtggaggtgctg gtatctgcaagcagccccagactggactccaggtccaccacctctctggtgtccatcaac atctccagctcagctgaggctcaaacaggagtgccactagatatccagaccatcagtctg acggtgtccctggccatgttcctcctcatcctcatcagctttgtggcccttgtactcaga tacaagaccaaagatgccgccatcaaaaaagcagcggcaatcgcagccaatctgaacaac ggcagcggaacattcggcaggtcgggccgccagcctcacaacgtcattggcctgcacgaa cttagaccaatgaacatgcgggcgaagagggaggtgcccaacttgtacaggaagtccaac tcgagcggtaggggttctgccgaaggtgagactgccgaggaccaagagatcaagatgatc aacaactatccgtgccatgaacgggcagactctgaccggagcgagaccacgcttacggtc cctgacccagctgtgcccagagactctgaccagctgtcctgccactccatagatgtgggc ccttcggttttggtacaaggaactatgcccggcaacattaacatgggcacggcgagctca gaaagcctccacactttcagagaagagggcgggggcgagggcatgctccccagagtgctc agggtgaaggacattgaggagggcatgaggacaagaggctatgtgcagctctcaaagggc caagtaccggtggacagttccatgacctccctgctgtgtccggaggagcagctcagaggc agctacagctgggactacctcttggactgggaaccgagctaccagacaatggcctctgtc ttcactgacattagcctcctgcccgatgaggagctccagggaggccacgaaggcctggca gccgaggtccccagcctcatgcaccccccacctctcatcacaggggtggcccagtctggc atccgggcggtgccacccaggatgccacagccgacctcacgtgcccacacgctcagcagg agaccctcgtaccctaaatatgcctactcccccctggccaggaacactgggctcactcca tcagcgatgacgcctagtttttccccctccctgtcgctgctcaccctcaggaccccgaac gcctccccggtggtctcagagacggggctgggcagcgtcagactggactcgctcactgcc agcctcctggaagctgaaattcaagtgtaa

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