Osmerus eperlanus (European smelt): 134033222
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Entry
134033222 CDS
T10927
Symbol
tlr3
Name
(RefSeq) toll-like receptor 3
KO
K05401
toll-like receptor 3
Organism
oep Osmerus eperlanus (European smelt)
Pathway
oep04217
Necroptosis
oep04620
Toll-like receptor signaling pathway
oep05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
oep00001
]
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
134033222 (tlr3)
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
134033222 (tlr3)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
134033222 (tlr3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
oep04054
]
134033222 (tlr3)
04090 CD molecules [BR:
oep04090
]
134033222 (tlr3)
Pattern recognition receptors [BR:
oep04054
]
Membrane-bound pattern recognition receptors
Toll-like receptors
134033222 (tlr3)
CD molecules [BR:
oep04090
]
Proteins
134033222 (tlr3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
Tlr3_TMD
LRR_1
TIR_2
TIR
LRR_9
Motif
Other DBs
NCBI-GeneID:
134033222
NCBI-ProteinID:
XP_062333283
LinkDB
All DBs
Position
14:complement(9488617..9494639)
Genome browser
AA seq
910 aa
AA seq
DB search
MNSPHSIITILAMGFSCLTISSGLGLASPKKTTCHVRHEKADCSRLLLKEIPPDLPRNIT
SLDMSHNRMVGLSPASLYPYPGLIHLDVGFNSLTRLEAGVCQTLCHLRSLDLQHNEVHLL
TEKDLSCCANLTQLNLAWNRLKLQGEPFAALQSLTQLDVSKNGLESAKLGSQHQLPNLVS
LILSNNTISILKKDDFSFLSSSSSFRVLDLSHLSLLKMIEPGSLAPIKTIEELIMESKQL
TQQLMSQLCMELSGTAIHNLFLQNTGVILTNTTFKALEKTNLTFLDLSHNNLTTLENSPF
QWLTKLKTLILEQNNLKNLNKETFQGLGNLTLLNLRRALVKSKKSHTPAIKDFSFQPLGA
LESLIMENTVFQEITENTFTGLNNLRNLNLGFAICVSLKKINNLTLVSLINSPVQTLNLT
GTSINHLGPGAFSSLRNLTSLLLAFNFIAQTLNGTEFQGLDQLQELKLFNNQQKIKLSPT
SFTGVPRLKSLFLGKALSSPQDMNPSPFKPLSNLTLLDLSNNNIANINASLLKGLDNLKV
LKLQHNNLARVWKAANPGGPVLFLEGLSSLTVLEMDITGLDEIPREGLRGLTNLRELSLS
GNVLNYLEDSIFDDLRSLQVLRLQKNLITSVRKEVFSKAFANLSLLVIDTNPFDCTCESI
LWFVNWLNTTNASVLGRDEYTCNTPSAYFNHSVMKFDPQSCKDMTPFYTLYVLSSTTVLT
FMVTAFLFRFHGWRIQFYWNILVNKTLGLSDTKRVKGRNYEYDAYVVYAEADEKWVTTRL
LPLEEEEYRFFLENRDSVPGGPRLQSIVDDMKNSQKIIFVVTESLFRDPLCRRFKVHHAL
HQVIEKGRDRLVLILLQDVQDYRLSQALLLRRGMLRPRCILHWPMEREQIPAFHQKLRIA
LGIVNRGQKV
NT seq
2733 nt
NT seq
+upstream
nt +downstream
nt
atgaactcgccacattcaatcattactattctggccatgggttttagttgtctcactatc
agctctggtctgggcttagcctctccgaagaagaccacctgtcatgttcgtcatgaaaag
gctgactgcagccgccttctcctcaaggagatcccaccagacctccctcgaaacatcacc
agcctggacatgtcccacaaccgcatggtgggcctctcccctgcctctctgtacccatac
ccaggcctcattcatctggacgtgggcttcaacagtctcacccggttggaggccggagtc
tgccagactctgtgccatctccggagcttggacttgcagcacaacgaggttcatctgctc
acagagaaggatctaagttgctgtgccaatctgacgcaactgaacttggcttggaacaga
ctgaagttgcagggggagcccttcgctgctctacagagcctgactcagcttgatgtgtcc
aaaaacggacttgagtctgccaagttaggctcccagcaccaacttcccaacctagtgtct
ctcattctttcaaacaacacgatatccatactgaaaaaggatgacttctcctttctcagc
tcctcctcgtcctttagagtcctcgacctgtcacatctgtctcttctgaaaatgattgag
cctggtagcttagcgcccataaagaccatagaagaactaatcatggagagtaaacaacta
acccagcagctcatgtcccaactctgcatggagctgtctgggactgccattcataatctg
ttccttcagaacacaggggtcatactaacaaacacaacctttaaggccttggagaagacc
aacctgacctttttagatctgtcccacaataacctgacaacattagaaaatagtcccttt
cagtggctgactaagctgaagactctgattctggaacagaacaacttaaaaaacctgaac
aaagaaacattccaaggactgggcaaccttacactgctcaacctgaggagggcgctagta
aagagcaagaagtcccacacccctgcaatcaaggatttctccttccagccactcggggcg
ctggagagtctgatcatggagaacacagtatttcaagagatcacagagaacacttttaca
ggtcttaacaatctacgcaacctgaacctgggatttgccatctgtgtgtcccttaagaaa
atcaacaacctgaccctggtttcgcttatcaactcccctgtccagactcttaatctgacg
ggaacatccatcaaccacctgggccctggggccttctccagcctgagaaacctcaccagc
ctcctgctagccttcaacttcatcgctcaaactttgaacgggacagagtttcaaggactg
gaccagttgcaggagctcaaactctttaacaaccagcagaagatcaaactaagccccaca
tcctttactggtgtgcccaggctcaagtccctgtttttgggcaaggctttaagtagtccc
caggatatgaatccctctccgttcaagccattgtccaacctcacccttctggatctcagc
aacaacaacattgccaacatcaatgcaagtctccttaagggactggataatctaaaagtc
ctaaagctgcagcacaacaatttggctcgagtatggaaggctgccaacccaggagggccg
gttctgttcctcgaggggctaagtagcttgaccgtcctggagatggacatcacaggactg
gacgagattcctagagagggtcttcggggcttgactaaccttcgtgagctcagcctcagc
ggtaatgtccttaactacctggaggactcgatctttgatgatttgagatccctacaggtt
ttgcgcctccagaagaacttgatcacttctgtgcggaaggaagtgttcagcaaggctttt
gccaacctcagcctattggtcatcgacacgaacccttttgactgcacctgtgagagcatt
ttgtggtttgtgaactggctaaacacaaccaacgccagtgtgctgggccgtgatgagtac
acatgtaacacgccctcagcctacttcaaccactcggtcatgaagttcgacccgcagtcc
tgtaaagacatgaccccattctataccctctatgtactaagcagcaccactgttctaacc
ttcatggtcaccgcatttttgtttcggttccatggatggagaattcagttctactggaat
attctggtcaacaagaccttaggtttaagtgacaccaaacgtgttaaggggagaaattac
gaatatgacgcctatgttgtttatgcagaagcagatgagaagtgggtaaccacaaggctg
cttcctctagaagaagaggagtataggtttttcctggaaaaccgtgactctgtgcctggt
ggtccacgcctacagtctattgtggatgatatgaaaaattcccaaaaaattatatttgtt
gtcactgaaagtcttttcagagacccactgtgcagacgcttcaaagtccaccatgccctt
caccaagtcattgagaaaggcagggaccgcctggtgctcatcctccttcaggacgtgcag
gactacaggttgtcccaagcactgctcctgcgcaggggcatgctgaggccacgctgcatc
ctccactggcccatggagagggaacagatccccgcctttcaccagaagcttcgcatagca
ctgggcattgtcaatagagggcagaaggtttag
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