Osmerus eperlanus (European smelt): 134033303
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Entry
134033303 CDS
T10927
Symbol
cnga1a
Name
(RefSeq) LOW QUALITY PROTEIN: cyclic nucleotide gated channel subunit alpha 1a
KO
K04948
cyclic nucleotide gated channel alpha 1
Organism
oep Osmerus eperlanus (European smelt)
Pathway
oep04744
Phototransduction
Brite
KEGG Orthology (KO) [BR:
oep00001
]
09150 Organismal Systems
09157 Sensory system
04744 Phototransduction
134033303 (cnga1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
oep04040
]
134033303 (cnga1a)
Ion channels [BR:
oep04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
134033303 (cnga1a)
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
CLZ
cNMP_binding
NPR3
Sec62
CDC45
DDHD
Ion_trans_2
Motif
Other DBs
NCBI-GeneID:
134033303
NCBI-ProteinID:
XP_062333389
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Position
14:9035190..9039402
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AA seq
710 aa
AA seq
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MATTSSTRRYLSVSSRVTSEMNTDTEGDSTEDDVDPQPPGPGRLFNVNNSNNNEGEEKTK
KKKEKKEKKEKKEKKEKKEKKKEKKEKEEKEREKEQEKEKEKEREKEKEKEREKEKAKYV
XHMNTSVPKEVFVINPAGSLYYNWLFVIAMPVMYNWTMIIARACFEELQHDYLLTWMILD
YCSDVLYLADMAFRARTGYLEQGLLVKDKKLLRQRYFSSLQFRVDVVSMLPTDVFYLYLG
LDYPEIRINKLLRINRMMEFFTRTETKTNYPNIFRISNLVMYIIIIIHWNACLYYSFSKS
IGFGSDAWVYPALDDPDEPEFGEPMRKYAFSLYWSTLTLTTIGETPSPALDSEFLFHVVD
FLVGVLIFATIVGNIGSMITNMNAAQTQFQSRIDNIKQYMQVRKVSKELEDRVIKWFDYL
WNNGKAQNEREVLRYLPDKLRAEIAINVHLDTLKKVRIFADCEAGLLIELVLKLRPQVFS
PGDFICKKGDIGREMYIIKEGKLAVVADDGVTQFVVLGDGSVFGEISILNIKGSKAGNRR
TANIRSIGYSDLFILSKDDLMEAMTEYPEAKVILEDKGRQILLKDGLLDLDPSNIMPDTK
DLEEKVDRMYSTMELMQMKLKKLLGDYTITDQALVDRIAMMERLTGEEAEEEDEQGEGEE
TKAEAEEEKKEEGVVEEKKEGEAEEEKKEEEMDEKEEAKKDXEEKKTEEK
NT seq
2133 nt
NT seq
+upstream
nt +downstream
nt
atggcaaccacatcgagcaccaggcgctacctgtctgtgtcgtctcgtgtcacctcagag
atgaacactgacacagagggggacagcacggaggatgatgtagatccgcagcctcctggc
ccaggtcgtctgttcaatgtcaacaacagcaataacaatgagggagaagagaaaacaaag
aagaaaaaagagaagaaagaaaaaaaggagaaaaaagagaagaaggagaagaaagagaag
aaaaaggagaaaaaggaaaaagaggaaaaggaaagagaaaaggagcaagagaaggaaaag
gagaaggaaagagagaaggaaaaggagaaggaaagagagaaggaaaaggcgaagtatgtg
tagcatatgaacacatcagtgcccaaggaggtgtttgtcattaaccctgcaggcagtttg
tactacaactggctatttgtcatcgcaatgccagtcatgtacaactggacaatgattatt
gcaagggcctgttttgaggaactccagcatgactaccttctcacctggatgattctggac
tactgctctgatgtcctgtacctggctgacatggccttcagggccaggacaggttacctg
gaacaaggccttctggtgaaggataagaagctgctgcgtcagcgctacttcagcagccta
cagttccgtgtggatgttgtgtccatgctccccacagatgtcttctacttgtacctgggg
ctggactacccggagatccgcatcaacaagttgctgcgcatcaaccgcatgatggaattc
tttacccgtaccgagaccaagaccaactaccccaacatcttccgtatctccaacctggtc
atgtacatcatcatcatcatccactggaacgcctgcctctattattccttctccaagtcc
atcggcttcggatcggacgcctgggtctaccctgccctggatgacccagacgagccggag
ttcggggagcccatgaggaaatatgccttcagcctctactggtccaccctgacgctgacc
accatcggggagacgccgtccccggccctggactccgagttcctgttccacgtggtggac
ttcttggttggggtcctgatcttcgccaccatcgtgggcaacatcggctccatgatcacc
aacatgaacgctgcccagacccagttccagtcccgcatcgacaacatcaagcaatacatg
caggtgcgtaaggtcagtaaggaactggaggaccgtgtcattaagtggtttgactacctg
tggaacaatgggaaggctcagaacgagagggaggtgttgaggtacctgccagacaagctg
agggcagaaatcgccatcaacgtccacctggatacgctgaagaaggtgcgcatctttgcc
gactgcgaagcgggcctgctgattgagctggtgttgaaactgcgaccccaggtgttcagc
ccgggggacttcatctgtaagaagggtgacatcggacgcgagatgtacatcatcaaggag
ggcaagctggcggtcgtggccgacgacggcgtcacacagttcgtcgtcctgggcgacgga
agtgtctttggcgagatcagcatcctcaacatcaagggcagcaaggcagggaaccggagg
actgccaacatccggagcattggctactctgacctcttcatcctgtccaaagatgacctg
atggaggccatgacggagtacccggaggcaaaggtcattctggaggacaagggcagacag
atcctgctaaaggacggcctcctggatctggacccatccaacatcatgcccgacactaag
gacctggaggagaaggtcgaccgcatgtacagcaccatggagctgatgcagatgaagctg
aaaaagctgctgggagactacaccatcacagaccaggccctcgtggatcgcatcgccatg
atggagcgactgaccggagaggaggcggaggaggaggacgagcaaggggaaggggaggag
acaaaagcagaggcggaggaagagaaaaaagaggaaggagttgtggaggagaaaaaggaa
ggagaggcagaagaggagaaaaaagaagaggagatggatgagaaggaagaggcaaaaaaa
gattaagaggagaaaaaaacagaggagaagtag
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