Osmerus eperlanus (European smelt): 134033321 Help Entry 134033321         CDS       T10927                                  Symbol setx Name (RefSeq) probable helicase senataxin   KO K10706   ATP-dependent RNA/DNA helicase, senataxin [EC:5.6.2.5 5.6.2.3] Organism oep  Osmerus eperlanus (European smelt) Brite Enzymes [BR:oep01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.3  DNA 5'-3' helicase      134033321 (setx)     5.6.2.5  RNA 5'-3' helicase      134033321 (setx) Transcription machinery [BR:oep03021]  Eukaryotic type   RNA polymerase II system    Other transcription-related factors     Transcription termination factor      134033321 (setx) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Other DBs NCBI-GeneID:  134033321 NCBI-ProteinID:  XP_062333403 LinkDB All DBs Position 14:4552227..4569954 Genome browser AA seq 2503 aa AA seqDB search MMSTCRWCTSVENGAAELLQSYSSGSLSVEDEEAVNADLCFCNECVLEYHRARENFPALH KRLWKLETSRLRSHFSQFSKEELEDDDLWVIEDNQEETKVSKTNPAEYANVLRFPLLEIL KYPYLMADPQLSDMCVEALCKMEKSNQSFQVTEKNPGIYLLLVHPNETVRRWAINVARSL GNVDRDDFYDLQEIFSCMFCVVELGISRNLPGIDPTYDPTRKMTMLPSHLYDYQNDKNYW LGICMLLTQLDTQAMDSLFLGPDKQANILQCILNTMENSMEDEEEDGKEDPFWPALQCFM VILDRLGSRIWGQIEPIPAFTTITESSSYMKEIDCIRKESQMPQVKVEPVLDDDDDDDST VTCSQMVYCANIPDQSKEKRGRRSHGADGSVVYEEMNCLVNYLQSDLGQALRIHNSTFLW FIPFIKSIMDLNDLHINEVIHYLCEEMNRDWQERRSTCDKVSEFFTLILVYIINLHLESG CMNMLYYCAPNWVEVLVKTATLPGEAFKGLEVPSSHSVSSTSSSRLPPPRKTVSNRAVPQ ACMALIRALLKEGSKLCSNTPQQTAKCSHFLDLLNQQIRGPQKDWILKGSEVKHLQNCLK QFVRQMMDKPARTITPPADALNAGHASPLVCAPSDLPGPSGLIVGSRPIKEEVSLDYNED APHDGSNRSAQLLEAPSLKKEFIEEPATAKDISASPPILEKSSLRPDLGRILELKSKLSE LMSNKNAGVKNSVAFEPRSRDETESPKPSTSNSDRTRREVMSPPADSTESESVDNTRLSV LKRTNVKPHIPPGSCHKLDRSVFNETREDVIVISDGDGESDSDGGSGEDLFFVKKMIKSE PSGMNHSLCREYEGDESQVFEFETQEDVVSAWADSGLENDNVQHVIPPKTKNDCPIRPAF SETSAFPENDTQPISDEDIERAMLEAEEGIAKQKRPSQDRKRAAIVPKKDIFVEPKPLPV KARSKKPDHEERRSKEHAVIAPQFTMPLPKKADHTSDSTWIEKEARPSLSKPTSSRTEKE TQASSSSASNSRPAQSTSMPAIVPPRKVRKAKEPESTAEKLGLKKKERKAFDLSQRSRDY VDQLRLHGQGVQVGQAGRKRTRKTKKAKVRTSDTLVVPGTKRKLIPPKQRQFFRQAKSKQ QGGGPGAPAHPGENAEEDTCGKNKKDPERRALPLMFSDEEDEDDLLPCSQPDPEKKVFKA AMNGNAPESPTTSSTTLSSTDIQISKCFHGKDDVTASSSGQAARGDEMLGNDDYDYEWMM YTQTGPTDMEMSSQMEENEDEFYTQRDPVDMDIDGDSQEPADGEDLPGDLQADQNHGFKK PPAPLSATAAAQNDERLFLKPGMSPMSSMNAKPSTTKIYASPSSSRNASLMQDMEKTPAG CALGRGRFNRPPPVRRPGAPQPHPLPQAQSVQMPPPPLVEVPNRHQGGCLFGTSLVPNRH PNILLDPSTPIQNILRWTYDMFTNYKQFGAPTDLCAFPLVPVGTHFKSFDEYYKTFYPLL LINAFEELCSDWQKNSGTRQMKLNLVGNDFRNGVWNVNFEAVLTPNEESRHLYPKEDDLV VLWLPQNTGAYSIYEQDQLEPKAYFGCVHKSNVQREGQPTITMIIKTCGNVTSVNKMPVR CDVVGSLINTLREFRALVSLKSSPLNRSLLAPQISYFTPGEDDGSALNLPEYNSDQLKAV RNGASAVRNQAKGPKVCLIHGPPGTGKSKAIVGLLMNLFSGGAQSMAPTSANRLSKPRRL RVLLCAPSNAAIDNLMKKVIVAFKSLSLPQRPQGNCGDINLVRLGSEKVISKKLADFSLD NQIKSRTEKAMLQNPDVHRRSAQLEEWIYNISREISREKKDSPKYRELVEKKARLAKDRQ ALSSELKQSRSMKQAMQARVLNDAHVICSTLSTSGSMVLESAFRRLGHEPFNCVIVDEAG QATETETLIPMLYRCSTLILVGDPNQLPPTVVSQKAKELDYSQSLMARLCQRLRLLSQEQ GCPSPVVFLRKQYRMHPDICEFPSKHIYNKMLITDSATGEERCAAGWPFQPYLLFDVVDG QELKDRESFCNEKEARLVLLLLRLMNGHVMAAVKKQAGVQLDKKQVKVGVITPYNGQKER VRREMSREDFEYVQVVVDTVDGFQGQEMDCIIVSCVRAGQDGIGFLANRQRMNVTITRAR CSLFILGHLRTLKSGDSDWGALINDASRRGTIVRAEEKAFNNAVQKIFKPFPSLARNLSY PAPNPSSRAEAPRPASVSQRRSSYPVPSAQASGCSLQQHPSNASPPQAVARPTDPRLAAR VPQPPDQKAQSLKPQGDPRAETSPRYLPAPQPRVEALRETVRDHPAVNKNKVRFSDTGQK RVKSPQDFSSWAPSAGSSSSNRDPRGDGARDHRAAVYNREPQVDGSRTACAENIRDPATD APRPSRGRRGDPGTNSPSGGDVEYNHGRSSKALLPEKDMHSVSGAPPHPAPGERTARDPR LTGSTHDKARSPHLNPPTHTPKGLKRSSDQQWDPPSSSKRAKR NT seq 7512 nt NT seq  +upstreamnt  +downstreamnt atgatgagtacctgtcgctggtgcacgtcagtagaaaatggtgccgcagagctgctccag agctacagttctggctcgctctcggtcgaagatgaggaggcggtcaacgcggacctctgc ttctgcaacgagtgtgttctggagtaccacagagcgagggaaaacttccctgctctgcat aagaggctttggaagctggagacatctcggctccgcagccacttctctcagttttcaaaa gaggagctggaggatgacgacctctgggtcatcgaagataatcaggaggagaccaaagtg tctaaaacgaacccagcggagtatgctaatgtcctacgcttccctctgcttgagatcctg aaatacccctacctaatggctgatccacaactgagtgacatgtgtgtcgaggctctttgt aagatggagaaatcaaaccaatcctttcaggttactgaaaaaaacccaggcatctacctc ctcctagttcatcccaatgagacggtgaggcggtgggccatcaacgtggccaggtctctg ggcaacgtggacagagatgacttctatgacctccaggagatattttcctgcatgttctgt gttgtggagcttggaatctcccggaacctcccggggattgaccccacttacgaccccacc agaaagatgacaatgctgccatcgcatctgtatgattatcagaacgacaagaactactgg ctgggcatctgcatgcttctgacccagttggacacacaggccatggactctctgttccta ggaccagacaaacaggccaacatactccagtgtatcctcaatacgatggagaatagcatg gaggacgaagaggaagatgggaaggaggaccccttctggccggccctgcagtgcttcatg gtgatcttggaccggctgggctccaggatctggggtcagatagagcccatccctgccttc acgactatcacagagagctccagctacatgaaagagattgattgcataagaaaggaatct cagatgccgcaagtcaaagtggagcctgtgcttgatgatgatgatgatgatgatagcacg gtgacatgcagtcaaatggtgtattgtgctaacatcccagaccagagcaaggaaaagaga gggcgacgctcccatggtgcggacggcagcgtggtgtacgaggaaatgaactgtctggtg aattacctgcagtctgatctaggtcaggccctgcgcatccacaacagcaccttcctgtgg ttcatccccttcatcaagtccatcatggacctcaacgacctacacatcaacgaggtcatc cactatctatgtgaagaaatgaacagggactggcaggaacgacgatctacctgcgacaag gtctccgagttctttaccctcattctcgtttacatcatcaatctgcacctggagagtgga tgcatgaacatgctttactactgcgcccccaactgggtggaggtgttggtgaagacggct acacttcccggtgaggctttcaagggcttggaagtaccaagctctcactctgtctcctcc acttcatcatcgaggttgccaccgccccgcaagacggtttcgaacagggcagtgcctcag gcttgcatggctctcatccgggccctgcttaaggaaggcagcaagctgtgctccaacacc cctcaacagaccgccaagtgttcacatttcttggatctcttgaaccagcagatcagaggc cctcaaaaggattggatactgaaagggtcagaggtcaagcatctgcagaactgtttgaag cagtttgtcaggcagatgatggacaaaccagctagaacaatcaccccgccagctgacgcc ttgaatgccggccatgcatcaccacttgtttgtgcaccatctgaccttccagggccaagc ggtttaatagtaggtagccgtcccattaaagaggaagtgtcgttggattacaatgaagat gctccccatgatggcagcaatcgtagcgcacaactcctggaagcaccatcgctgaagaag gaatttattgaggaacctgcaacagcgaaagacatctctgcttcacctccgatcctcgag aagtcctctttgagaccagatctgggaagaattctggaattaaaatccaaactcagtgag ctgatgtctaacaagaatgcaggcgtaaagaacagcgtggcctttgagcctcggagcaga gacgagacagaaagtcccaagccctccacatctaactctgacaggacaaggagagaggtt atgagcccccctgctgattccactgaaagcgaatccgtcgacaatactcgcctctcggtg ttgaaaagaacgaacgtgaaaccccatatacctcctggcagttgtcacaaacttgacaga tccgtgttcaatgaaacaagagaggatgtcattgtaatatcggatggcgatggcgaaagc gatagcgatggggggtcaggagaagaccttttttttgtgaagaaaatgatcaagagcgaa ccctctggcatgaaccacagcctgtgtcgtgaatatgagggggacgaatcacaggtgttt gagtttgagacgcaggaagatgttgtatctgcttgggctgactcgggtctagagaacgac aatgtgcagcatgttattcctcccaagactaaaaatgattgtcccatcagaccagcgttt agtgaaacctcagcttttcctgaaaacgacacacaaccaatttcagatgaagacatagaa agagccatgctagaggcagaggaggggatagccaagcagaagaggccttctcaagatcgt aaacgtgccgccattgtcccaaaaaaggatatttttgtagagccgaaaccacttcctgtt aaagcccggagcaagaaacctgaccatgaagagaggagatccaaagaacatgcagtgatt gcccctcagtttaccatgccgcttcccaagaaagcagaccatacttctgactccacttgg atagagaaggaggcccgaccctctctctcgaagcctacctcctccaggaccgagaaagag acccaggcttcctcctcctccgcctccaattcaaggccagcccaatctacctccatgcca gcgattgtgcccccaagaaaggtccgtaaggccaaggagcccgagtccacggcggagaag ctaggccttaaaaagaaagaacgaaaggcctttgatttgtcccagcgatcccgggactac gtggaccagctgagactccacggccaaggagttcaagtaggacaggcagggaggaagcgc acccgaaagaccaagaaggccaaagtccggacctccgacacgcttgtagtgccgggtact aaaaggaagctcatacccccaaagcaacgccagttcttcaggcaggccaagtctaagcag cagggggggggaccgggggccccagcacaccccggggagaatgctgaggaagacacctgt gggaagaacaagaaagatcctgagcgacgagcccttccactcatgttttcagacgaggag gatgaagatgatctcctgccttgctcccagccagatccggagaagaaggttttcaaagca gcgatgaatgggaacgcgccagaatctcccaccacatcgagcaccaccttatccagcaca gatattcaaatatcgaaatgtttccatgggaaagatgatgtcactgctagcagctctggt caggctgccaggggggatgaaatgcttggtaatgatgattacgactatgaatggatgatg tacactcaaacagggcccacagatatggagatgtcctcccaaatggaggaaaatgaagat gaattctatacgcagcgagatcctgtagacatggatattgacggagacagccaggagccc gcggatggagaagatctgccaggcgacctgcaggcagatcaaaaccacggttttaaaaaa ccgcctgcgcctctatctgccaccgcagctgctcagaacgacgagcgcttgttcctgaaa ccaggcatgtctccgatgtcttccatgaacgccaagccgtccaccaccaagatctatgct tcaccgtcaagttccagaaatgcttcgctgatgcaggacatggagaagactccggctggt tgtgctttgggaaggggcaggttcaacaggccccccccagtccggagacctggtgccccc cagcctcacccgctcccccaagcacagtctgtacagatgcctccacctcccttggtggag gtgccaaacaggcaccaaggggggtgcctgtttggcacctcccttgtgccaaacaggcac ccgaacatccttttggacccctccacccctatccagaacattctaaggtggacctatgat atgttcaccaactacaagcagtttggagcgcctacagacctgtgtgccttcccgttggtg ccagtgggcacacactttaagtcctttgatgagtactacaagaccttttaccctttgttg ctcatcaatgcgtttgaagagctttgctctgattggcagaagaacagtggaacaagacag atgaagctgaacttggtcggaaatgacttccgcaacggtgtatggaacgtcaatttcgag gcggttctcactcccaatgaagagtcgcgtcacctgtaccctaaggaggatgacctggtg gtcctgtggctgcctcagaacactggagcttactctatatatgagcaagaccaactggag cccaaggcatacttcggttgtgtccacaagtccaacgtccaacgcgagggccagcccacc atcaccatgatcatcaagacatgtgggaacgttacgtctgtgaacaagatgcccgtgcgg tgtgatgtggtgggttccctcatcaacaccctgcgggagttcagggccctggtcagtctg aagagcagtcccctgaacaggtccctcctggccccccagatctcctacttcacccctggc gaggacgacggctccgccctcaacctgccagagtataactcagatcagctgaaggccgta aggaacggggcatctgctgtcaggaaccaggccaagggccccaaggtctgcctgatccac ggacctccaggaacgggcaagagcaaggcgatcgtaggcctgctcatgaatctcttctcg gggggtgcgcagagcatggcccctacctccgccaaccgcctttccaagccccgtcgtctc agggtcctcctctgcgctccctccaacgccgccattgacaacctgatgaagaaggtcatc gtggcctttaagagtctaagcctcccgcaacggccccagggcaactgtggggacatcaac ctagtaagactgggcagcgagaaggtcatcagtaagaagctcgctgacttcagcctggac aaccagatcaagagccgaacagagaaggccatgttacaaaacccagacgtacaccggcgc agcgctcagcttgaggagtggatctacaatatctccagggagatcagccgtgaaaaaaag gacagtcctaagtacagggagttggttgagaagaaggccagactggccaaggacagacaa gccctcagcagtgagctcaagcagagtcgcagtatgaagcaggcaatgcaggccagggtc ctcaacgacgctcacgtcatctgctccaccctgagcaccagcggcagcatggtcctagag tccgcctttcgacgcctcggacacgaacccttcaactgcgtcatcgtggacgaggcaggt caggccacagagacggagaccctgatccccatgctctaccgctgcagcacactcatactg gtgggagaccccaaccagctgccccctactgtcgtctcacagaaagcgaaggagctggac tacagccagtctctgatggcccggctgtgtcagcgcctgaggctcctcagccaggagcag ggctgccccagccctgtggtgtttctacggaaacagtaccgcatgcaccccgacatctgc gagttcccctccaagcacatctacaacaagatgctcataacagacagtgctacaggagag gagaggtgcgctgccggttggcctttccagccctacctcctgtttgacgttgtggatggc caagagctcaaggacagagagtcgttctgcaacgagaaggaggcgcggctggtgctgctg ctgctgaggctgatgaacggccacgtgatggcggccgtgaagaagcaggccggcgtgcag ctggacaagaagcaggtgaaggtgggcgtgatcaccccttacaacgggcagaaggagcgt gtcaggagagagatgtcgcgggaggacttcgaatacgtccaggtggtggtggacactgtg gacggcttccagggccaggagatggactgcatcatcgtgtcctgtgtcagggcgggccag gatggcatcgggtttctggctaacagacagcggatgaatgtaaccatcacacgagccagg tgtagcctgttcattctgggtcacctgcgcacactcaagagcggcgacagtgattggggt gcgctaatcaacgatgctagcaggagaggcaccattgtccgcgctgaggagaaggccttc aacaacgccgtccagaagatcttcaagccctttccctccctcgcccggaacttgtcctac cccgctcctaacccttcatcccgagcggaggcccccaggcccgcctctgtcagtcagcgc cgctcttcctaccctgtgccctccgcccaggccagtggctgctccctccagcagcacccc agcaacgcctcccctccccaggcagtagcgcgacccaccgatccccggctggcggcgaga gtcccacaaccccccgaccagaaggcccagtcgctcaagccccagggggaccccagggcg gagacctcaccccggtacctcccggccccccagcccagggtagaggctcttcgggagact gtccgagaccacccggctgtcaacaaaaataaggtccgattcagtgacactgggcagaag cgggtcaagagccctcaggatttcagctcgtgggcgccctctgcaggcagcagcagcagc aacagggaccccagaggtgacggagcgagggaccaccgagcagccgtctacaaccgggag ccccaagtggacggctccagaaccgcgtgcgccgaaaacatccgggaccccgccaccgac gccccccgcccttccagaggacgacgtggggatcccggcaccaacagccccagtggggga gacgtcgagtacaaccatgggaggagctccaaagctctcctaccagagaaggacatgcac tctgtttcaggagccccgccccacccagcaccaggggagcggacggcccgagacccccga ttgactggctccacacacgacaaggctcgctccccgcacctcaacccccccacacacacc cctaagggactgaaacgctcctcggaccagcaatgggaccccccctccagttcaaagaga gcgaagagatga

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