Osmerus eperlanus (European smelt): 134033431
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Entry
134033431 CDS
T10927
Name
(RefSeq) ATP-dependent RNA helicase DHX15
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
oep Osmerus eperlanus (European smelt)
Pathway
oep03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
oep00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
134033431
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
oep03041
]
134033431
03009 Ribosome biogenesis [BR:
oep03009
]
134033431
Enzymes [BR:
oep01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
134033431
Spliceosome [BR:
oep03041
]
Complex A
U2 snRNP components
U2 related factors
134033431
Complex B
134033431
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
134033431
Ribosome biogenesis [BR:
oep03009
]
Eukaryotic type
90S particles
Helicases
134033431
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
WHD_HA2
DEAD
AAA_22
AAA_19
Cas3-like_C_2
SRP54
Flavi_DEAD
AAA_25
AAA_29
nSTAND3
nSTAND_NTPase5
AAA_7
Atrophin-1
Motif
Other DBs
NCBI-GeneID:
134033431
NCBI-ProteinID:
XP_062333567
LinkDB
All DBs
Position
14:complement(11097443..11105012)
Genome browser
AA seq
763 aa
AA seq
DB search
MSKRHRLDLGDDYSTKKRSDGKDRDRDRDRDDRSKDRDRDRDRDRDRDRDRDRDRDQKPP
GVAPIMAGGGMPQVKQMVMNQQINPFTNLPHTPRYYEILKKRLQLPVWEYKERFNEIITR
HQSFVLVGETGSGKTTQIPQWCVDLVKGIPGPKRAVACTQPRRVAAMSVAQRVADEMDIM
LGQEVGYSIRFEDCSSAKTILKYMTDGMLLREAMNDPLLERYGVIILDEAHERTLATDIL
MGVLKEVVRQRSDLKVIVMSATLDAGKFQVYFDSCPLLTIPGRTHPVEIFYTPEPERDYL
EAAIRTVIQIHMCEEEEGDALLFLTGQEEIDEACKRIKREVDDLGPEVGDIKIIPLYSTL
PPQQQQRIFEPPPPRKPNGAIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIR
VESLLVTAISKASAQQRAGRAGRTRPGKCFRLYTEKAYKTEMQDNTYPEILRSNLGSVVL
QLKKLGIDDLVHFDFMDPPAPETLMRALELLNYLAALNDDGDLTELGSMMAEFPLDPQLA
KMVIASCEFNCSNEILSITAMLSVPQCFVRPTEAKKAADESKMRFAHIDGDHLTLLNVYH
AFKQNHESNQWCYDNFVNYRSLMSADNVRQQLSRIMDRFNLPRRSTEFTSRDYYINIRRA
LVTGFFMQVAHLERTGHYLTVKDNQVVQLHPSTVLDHKPEWVLYNEFVLTTKNYIRTCTD
IKPEWLVKVAPQYYEMGNFPQCEAKRQLERIVAKLQTKEYSQY
NT seq
2292 nt
NT seq
+upstream
nt +downstream
nt
atgtctaaaagacaccgtttagatttgggagacgattactccactaaaaagagatctgat
ggaaaagaccgggaccgagacagagatcgtgacgatcgttccaaggaccgagacagagat
cgcgacagggaccgggacagagaccgagatcgggaccgcgacagagaccaaaagccacct
ggagtggcccccatcatggctgggggtgggatgccccaagtcaagcagatggtcatgaac
cagcaaatcaaccccttcaccaacctcccacacacaccgcgctactacgagatcctgaaa
aagaggctgcagctgcccgtttgggagtacaaggaacgcttcaacgagatcatcacgcgc
catcaaagcttcgtgctcgtgggggaaaccggctctggaaagaccacgcagatcccccag
tggtgcgtagacctggtgaagggaataccggggccaaagagagcagtggcctgcacccag
cccaggagagtggcagcgatgagcgtggcccagagagtggcagacgagatggacataatg
ctaggacaggaagtgggctactccattcgattcgaagactgcagctccgcaaaaacgata
ctgaagtatatgacagatggtatgttgcttcgcgaggccatgaacgacccgctgctggag
cgatatggggtgatcatcctggatgaggctcacgagaggacgttggccaccgacatcctg
atgggtgttttgaaggaggtggtccgccagaggtcggacctaaaggtcatcgtcatgagc
gccacgctggatgccggaaagttccaggtgtacttcgacagctgtcccctgctgaccatc
ccagggcgcacgcatcctgtggagatcttctacaccccggagccagagagggactacctg
gaggccgccatccgcaccgtcatccagatccacatgtgtgaggaggaggagggagatgcc
ctgctcttcctcacgggtcaagaggaaatcgacgaggcctgtaaaaggatcaaacgcgag
gtggacgacctcggccccgaagtgggagacatcaaaatcattccgctgtactccacgctg
cccccccagcagcagcagaggatctttgagcccccgccccccagaaaacccaacggtgcc
atcggcaggaaggttgtggtgtcaacaaacattgccgagacgtcccttactattgacggt
gtggtgtttgtaatcgaccctggttttgccaagcagaaggtgtacaaccctcgaatcagg
gttgagtctctgctcgtcacggcgatcagcaaagcctcggcccagcagagggcgggccgt
gctggcaggacacgcccagggaagtgcttccgtctttacactgagaaggcttacaagaca
gagatgcaggacaacacatatcctgagattctcaggtccaacttgggatctgtcgtactg
cagttaaagaagctgggtatcgatgacctggtgcactttgacttcatggacccgccagcc
cctgagactctgatgcgtgccctggagctcctaaactacctggcagcactgaacgacgac
ggtgatctgaccgagctgggctccatgatggccgagttccccctggaccctcagctggcc
aagatggtcatcgccagctgcgagttcaactgctccaacgagatcctgtccatcactgcc
atgctgtcagtcccacagtgcttcgtccgccccactgaggctaagaaggcggcggacgag
tccaagatgaggtttgcccacatcgacggggaccacctgaccctactcaacgtctaccac
gccttcaaacaaaaccatgagtctaaccagtggtgctacgacaactttgtcaactaccgg
tcgctgatgtcggccgacaatgtgcgccagcagctgtcccggatcatggaccgtttcaac
ctgccgcgccgcagcacagagttcactagcagagactactatatcaacatccgcagagcg
ctcgtcactggcttcttcatgcaggtagctcacctggagcggacgggtcattacctgaca
gtgaaggacaaccaggtggttcagctgcacccgtccacagtcctggaccacaaaccagag
tgggtactctacaacgagtttgtcctcaccaccaagaactacatacgcacctgcacagat
atcaaacccgaatggttggtgaaggtggcccctcagtactatgaaatgggaaacttccca
cagtgcgaggctaagagacagttggagcggattgttgccaaactccagaccaaggagtat
tctcagtactga
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integrated database retrieval system
