Osmerus eperlanus (European smelt): 134033655
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Entry
134033655 CDS
T10927
Symbol
lamc3
Name
(RefSeq) laminin subunit gamma-3
KO
K06247
laminin, gamma 3
Organism
oep Osmerus eperlanus (European smelt)
Pathway
oep04510
Focal adhesion
oep04512
ECM-receptor interaction
oep04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
oep00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
134033655 (lamc3)
04518 Integrin signaling
134033655 (lamc3)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
134033655 (lamc3)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_N
EGF_laminin
EGF_LMN_ATRN
Laminin_B
WS_DGAT_C
Motif
Other DBs
NCBI-GeneID:
134033655
NCBI-ProteinID:
XP_062333878
LinkDB
All DBs
Position
14:3393088..3462293
Genome browser
AA seq
1642 aa
AA seq
DB search
MSVVMEAHLPLRILAPLVILLQSLVLVQGAMSACYDDQGTPEHCLPRFENVAFNRTVFAS
NTCGDLPEDYCMQSGSKQLCNSCDASMPERSHNASLLTDFHSVEDPTWWQSQSMFYGIQH
PSSVNLTLHLGKSFEISYVRLQFYTSRPESFAIYKRTSEGAPWQAYQYYSASCKKTYGRE
GKIFIRPGDDERMAVCVDEFSDISPLTGGNVAFSTLEGRPSAYNFDQSAVLQEWVTATDL
LISLDRLNTFGDEFFKDIKVLQSYSYAISDFSVGGRCKCNGHASECVQGTEGSLVCSCQH
HTAGVDCQECAAFYQDRPWARATADSANECRRCNCSGRADACVFDAEQYRSTGSGGRCVG
CRDDTDGAHCERCREHHHRRTPQEACSACDCDPLGSVSLQCNAEGRCVCRAGVMGERCDA
CQPGYHSLGPGGCRPCACDPRGSIGVCAMEDGQCRCRAGVEGHACDRCKPGFFNLQQDLP
SGCQPCFCFGHSVACTSSSDHVAVNITSDFVEDQDGWSGEFSQGQEYPLLWKEGEVYLLP
LAEDDLGYYRAPEKFLGAQLLSYGRLLSLIFTAETPDLLPASVTVLLEGPGDSVSASLSS
PWPLPTPEPRPGLQSRRTFTVRLHEEDRRLQPSLSPSAFRQLLFNLTALRITNAGGPNYT
SQLSEVTLASAAPSFSLAAPPAPAAPWVEDCYCPLGFQGQFCERCGPGFTREVPSGGALS
PCVPCDCHMHGPCHPDTGVCECSDFTTGPTCQRCLDGYYGNALIGMPNDCRPCPCPDRTS
CAQMTETGDVVCTNCPPGRRGTRCEMCEDGFYGDPLGRSGPVRPCERCNCHGNVDLNALG
VCDHVTGLCLKCLGHTEGDRCQRCQRGFYGDALSRGPTDQKCKPCSCSPAGTSGPLEDCH
PQTGSCQCLSHVTGRDCGHCKVGFFNLQPGIGCERCNCNPIGSSSVACHPVTSQCMCRAG
VEGVSCGSCRIGFFGFSSRGCRACNCDPMGSTSMQCHGNGTCPCRQGFVGYKCDQCELDY
FHNRNTHQCEECPVCYGLVKEQARKLRTRLQEAEKLLSRYNCRGNYGRQLQPRDSEHHQH
EHQGEDSLPNALEDFLALQEAKEVFIKQFTQLGASAHTLSVQLHGAGSALDCRMSGDGKE
EGDQDTGRRSVCRTLASSLSKVEAAHTQLQKATLDLWSMMVPFELPMGPNRWNAAVNDSR
FLMTRQVGHAGHIEAIAGEALAVSNHTLSVLVELLEDNSTEEYIRNLTEQLADMRQRKHN
LTAQVNETLANQLALEADSAKIVVSLGNLTSSLQQLGQMNHTHLLGLNQSDPGFRSGSNQ
SDPSIKPGFTHSESPDLQARMSDLALQVNTKEELVSKIREEMEPKIHSAQGIMEKVQEIY
ELQARTQGSKAMALSSVVTGKEVESDIITLHRELEDIQREWPARQTQTRAAQRKERLLGE
KLLPDVRRKMGLAQEVLTTALENATLSNATARQAEPTAHTLAKKAKATLSQAKQTRSRSA
QLSSSVHAILEQLAEQEYRTASVKDQINSQSQVSLTSVKESMETAKRQLEAYSLTLTELV
SKIDGTVATDRFDRILNETTLRLSMLRGSVESPVLNGKIQKLTSAARDQQKRLSVLEQDL
QEIREERDSLSDIALQLPKSCP
NT seq
4929 nt
NT seq
+upstream
nt +downstream
nt
atgtcggtagtcatggaggcccaccttccactccggatcctcgcacccctcgtcatcctc
ctacaaagcctcgttctggtccagggggccatgtctgcttgttacgatgaccaaggcact
cctgaacactgcctgcctcgttttgagaatgtggctttcaaccgtaccgtctttgcctcc
aacacctgcggcgacctaccggaggactactgcatgcagtcgggctccaagcagctctgc
aacagctgtgacgcgtccatgccggagcgcagccacaacgccagcctcctgacggacttc
cactcagtagaagaccccacctggtggcagagccagtcgatgttctacggcattcagcat
ccctcctccgtcaacctcacgttgcacctgggaaagtccttcgagatcagctacgtccgg
ctccaattctacaccagccggccagagagcttcgccatctacaagcgcacctcggagggc
gccccctggcaggcctaccagtactacagtgcctcgtgtaagaaaacctacgggcgggag
gggaagattttcatccgtcccggggatgacgagcggatggcagtctgcgtggatgagttc
agcgacatctcccctctgaccggtgggaacgtagccttctccaccctggagggacgaccc
agcgcctacaactttgaccagagcgctgtgttgcaggagtgggtgacagccacagacctg
ctcatctctctggacaggctcaacacgttcggagacgagttcttcaaggacatcaaggtg
ctacaatcctactcctacgccatctccgatttctccgtgggcggcaggtgtaagtgtaac
ggccacgccagcgagtgcgtgcaggggacggagggctccctggtgtgttcctgccagcac
cacacggctggggtggactgccaggagtgcgctgccttctaccaggacaggccatgggcc
agggccaccgcagactccgccaacgaatgcagacggtgcaactgcagcggcagagccgac
gcgtgcgtgttcgacgcggagcagtaccggagcacgggcagtggggggcgctgtgtaggc
tgcagggacgacacagacggcgcccactgtgagcgctgcagagagcaccaccaccgcagg
accccgcaggaagcctgtagcgcctgcgactgcgaccctctaggttcggtgagtcttcag
tgtaatgctgaggggaggtgtgtgtgcagagcgggggtgatgggggagaggtgtgatgcc
tgtcagcctggttaccactcccttggccctgggggctgcaggccctgcgcctgcgacccc
aggggcagcattggcgtgtgcgcgatggaggacggacagtgccgctgccgggcgggagtg
gaaggacacgcgtgtgacaggtgcaagccaggcttctttaacctgcagcaggacctgcca
tcgggctgtcagccatgtttctgcttcgggcactcggtggcctgcacctcgtccagcgac
catgtggctgtcaacatcacgtccgactttgtcgaagaccaggacggatggtccggggag
ttctcccagggacaggagtaccctctgctctggaaggagggggaggtctacctgctacct
ctggctgaagacgacctgggatactacagagctccagagaagttcctgggtgcccagctc
ctgagctacggccggctcctctccctcatcttcaccgcagagacccctgacctgctgccc
gcctctgtcaccgtgctcctggaaggccccggggactccgtgtccgccagcctctcctca
ccctggccgctgcccacacctgagccccggcctggcctccagtcccggcgcaccttcacc
gtcaggcttcacgaggaagacaggagactccaaccgtctctgtctccatctgcattccgg
caacttctcttcaaccttacagccctacgaatcaccaatgctggaggacctaactacacg
tctcagctctccgaggtcactctggcctctgccgccccctccttcagcctcgctgccccc
ccggcccctgcagccccctgggtggaggactgctactgccccctgggcttccagggccag
ttctgcgagagatgcggcccagggttcaccagggaggtgccctctgggggtgccctctcc
ccctgcgtgccctgtgactgccacatgcacggcccgtgccaccctgacacaggtgtgtgt
gagtgctccgacttcaccacggggcccacctgccagcgctgcctcgatggttactacggc
aacgccttgattggcatgcccaatgactgccgaccttgcccctgtccggaccgtaccagc
tgtgcccagatgacagagacgggcgatgtggtctgtaccaactgtccaccagggcggagg
ggcacccgctgcgagatgtgcgaagacggtttctacggtgacccactgggccgctctggg
ccggttcggccgtgtgagcgctgcaattgccacggcaacgtggacctcaacgcgttaggc
gtgtgtgatcatgtgacagggctctgcctgaaatgcctgggccacaccgaaggagaccgc
tgccaacgatgccaacggggtttctatggagacgccctcagtcgcgggcccacggaccaa
aagtgcaaaccttgcagctgtagtcctgcagggacttctggaccattggaggactgtcac
ccccaaacaggaagttgtcagtgccttagtcatgtgacaggaagagactgtggtcactgc
aaggttggcttcttcaacctgcagcctggaataggctgcgagagatgcaactgcaatccc
attggctcctcttcggtggcgtgccacccagtcaccagccagtgtatgtgtcgcgccggc
gtggaaggcgtctcttgtggctcctgtcgaataggcttctttggtttctcctcccggggc
tgcagagcctgtaactgcgacccgatgggttctacttccatgcagtgccatggcaacggc
acctgtccctgtcgtcagggctttgtgggatacaagtgcgaccagtgtgagctcgactac
ttccacaacagaaacacacaccagtgtgaggagtgtcctgtgtgttacgggctggtcaag
gagcaggccaggaagttgaggacacgcttacaggaagccgagaaactactgtctcgctac
aactgccggggcaactacggtcgccagcttcaaccacgtgacagtgagcatcaccagcat
gagcaccaaggggaggactcgctgcccaacgcattggaggacttcctggcgctccaagag
gcgaaggaggtcttcataaagcagttcacccagctgggggcgtccgcacacactctctct
gtccagctgcatggagctggctcggccctggactgcaggatgagcggggatgggaaggag
gagggagaccaggacacagggcggaggagtgtgtgcaggacgcttgcaagttctttgtcc
aaggtcgaagccgcacacacccaactgcagaaggcaactctggacctgtggagcatgatg
gttccgtttgagttgccgatgggccccaaccgatggaatgcagcggtcaacgactcacgc
ttcctgatgaccaggcaagtgggccatgctggacacatagaggccattgcgggcgaggcg
ctggcggtttccaatcacactttatctgtgctggtagagctgctggaggacaactccact
gaggagtacatcaggaacctaacggagcaactcgcagacatgcggcagcgtaagcacaac
ctgacagcccaggtgaacgagaccctagccaatcagctggctttagaggcggactctgcc
aagatcgtggtttccctaggtaacctcacctcctccctgcagcagttgggtcagatgaac
cacacccacctacttgggctcaaccaatcggaccctggtttcagatctggctccaaccaa
tcagacccaagtattaaacctggattcacgcattcagagagcccagacctgcaggccagg
atgtcggaccttgccctacaagtcaacaccaaggaggagcttgtcagcaagatcagagag
gagatggagcctaagatccacagtgctcagggtatcatggagaaggtgcaggaaatctat
gagctgcaagcacgcacccagggttccaaggccatggccctctcatccgtggtgacaggc
aaagaagtggagtctgacatcatcactctgcacagggaacttgaggacatacagagggag
tggccggccaggcagacccagaccagggcggcccagcggaaggagaggctgctgggggag
aagctcctgcccgacgtcaggaggaagatgggcctggcccaggaggttctaaccacggcc
ttggagaacgctacgctctctaacgccacggcccgccaggcagagcccactgcacacaca
ctggctaagaaggccaaggcgaccctgagccaggccaagcagaccaggagcaggtctgcc
cagcttagctcctcagttcatgccatcttggagcagctggctgaacaggagtaccggact
gccagtgtaaaggaccagatcaacagccagtcccaggtgtccctgacaagtgtgaaggag
agcatggagacagccaagagacagctggaggcctactctctcaccctgactgagctggtc
tccaagattgacggcactgtggcgacggaccgcttcgaccgcattctgaatgagaccacg
ctgcgtctgagcatgctccgtggcagcgtggagagccctgtgctgaacggaaagatccag
aagctgacgtccgccgccagggaccaacagaagcgcctgtccgtactggaacaggatctg
caggagatccgagaggagagagacagtctgagcgacatcgctctacagctccccaaatcc
tgcccctag
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