Osmerus eperlanus (European smelt): 134033955
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Entry
134033955 CDS
T10927
Symbol
cacna1bb
Name
(RefSeq) LOW QUALITY PROTEIN: voltage-dependent N-type calcium channel subunit alpha-1B
KO
K04849
voltage-dependent calcium channel N type alpha-1B
Organism
oep Osmerus eperlanus (European smelt)
Pathway
oep04010
MAPK signaling pathway
oep04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
oep00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
134033955 (cacna1bb)
04020 Calcium signaling pathway
134033955 (cacna1bb)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
oep04040
]
134033955 (cacna1bb)
Ion channels [BR:
oep04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
134033955 (cacna1bb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Ca_chan_IQ
PKD_channel
Motif
Other DBs
NCBI-GeneID:
134033955
NCBI-ProteinID:
XP_062334227
LinkDB
All DBs
Position
14:16502273..16574056
Genome browser
AA seq
2187 aa
AA seq
DB search
MRRPTPENSTWAERRSTVVYALRSTTFNTWRMLTMGAEYGAWAQSPAGFRRRQAVVCDSD
DETDSCVDHEQSWRTENMDNTQYDRVYQLSEPVASEERGIRRIIRKHDALNSTPWSSNRM
ARFAEDLPTRYGGGGGGRGAPGAGRGGARVGGAPGGQRMYKQSMAQRARTMAIYNPNPVK
QNCFTVNRSLFIFREDNLIRKYAKRITEWPPFEYMILATIIANCIVLALEQHLPASDKTP
MSERLDDTEPYFIGIFCFEAGIKIIALGFAFHKGSYLRNGWNVMDFVVVLTGCALLPRGF
QSGRTEPAKMAAAQTAFRSLASLPGQILAYWIGPNFGITNFDNILFAVLTVFQCITMEGW
VDILYNANDASGNTWNWLYFIPLIIIGSFFMLNLVLGVLSGEFAKERERVEKRQEFLKLR
RQQQIERELTGYLEWICKAEEVLLAEEDENAEERSPLDVLKRGKVKKGKNDLIAEEEGVD
HFTDLSSAVPPGSPFGRASVKSSKMDSSSYFRRKEKRIRFFIRRMVKAQSFYWIVLCLVG
LNTLCVAIVHYDQPDWLTKALYLAEFVFLGLFLSEMALKMYGLGARNYFHSSFNCFDFGV
IVGSIFEVIWAMIKPGASFGISVLRALRLLRIFKVTKYWNSLRNLVVSLLNSMKSIISLL
FLLFLFIVVFALLGMQLFGGQFNFEEETPTTNFDTFPAAILTVFQILTGEDWNAVMYHGI
ESQGGVRRGMFSSVYFIVLTLFGNYTLLNVFLAIAVDNLANAQELTKDEEQQEEAANKKL
ALQKAMEVKEVSPMSAANISIAAFVKQNREALSRRSSVSSIHSPMEQQRCNKAMSVWEQR
TNVLRRHNLRASSEALFNELDPEERLRVSSALNLRPDMKTHLDRPLVVEAGNADKPRPPE
AEPCDEAPSDGQAPVSSSSAHPRKHHRHRERPGENGGAAEGRGSRHHAHHSRGREQGDGP
RGLQGTGERSREGGPTRKHHHQGGSPEEGGGVNGGEERDHRHHHAHHPPREGNGALANGA
RAERRGRGQRDGGGEGNGERRRHRTRMVRAQSTLDGEEGRESGEREGERGAGGHRSRQMD
PETGPPPGGAPLGPPLAPEGLLREEGEKQEDEDNLKNTTRDGRAGLNSNTIHIPVTVTSP
PGETTVIPMNNIDCESLALAEEKKDLEENGAPGPRHILPYSSMFVFGQTNPVRRLCHYVV
NLRYFEMCILMVITMSSIALAAEDPVQANAPRNNVLKYLDYVFTGVFTFEMVIKMIDLGL
ILHPGAYFRDLWNILDFIVVTGALVAFACSSLMGSQQSVARGTKGKDINTIKSLRVLRVL
RPLKTIKRLPKLKAVFDCVVNSLKNVLNILIVYMLFMFIFAVIAVQLFKGKFFYCTDESK
GLEKDCRGQFLDYDHDEVAAQPREWRKYEFHYDNVLWAFLTLFTVSTGEGWPMVLKHSVD
ATYEDQGPSPGFRMETSIFYVVYFVVFPFFFVNIFVALIIITFQEQGDKAMSECSLEKNE
RACIDFAINARPLTRYMPQNKQSFQYKMWKFVVSPPFEYSIMTMIALNTVVLMMKFHGAP
DLYESMLKYLNIVFTSLFTLECILKIIAFGPLNYLKAAWNVFDFVTVXGSITDILVTEIK
VLLATLNSSFSLQRLVRMNMPIADDNTVHFTSTLMALIRTALEIKLASGVLAQRLCDAEL
KREISRVWPNLQQKTVDLLVTPHKHKELTVGKVYAALMIFDYYKQNRAKKLQQQQAPGST
QRQGGSLFRPMLPLAHIQEQDTPPLSLQADTPSQPEAPPTTTSLTNDNAVTSQTDAIRES
EDAPTLQNLSNGNESLETSRLENDSDVEGFPXGGPWQSRLMPRLNAEYYRSHPRHAPGTH
LAPIADLSPIRRSASTLTPQRPLEAGLGDYALQRPAQGSATGQDRAHHRHHHHSCQRRRD
KDRKQKSLDGATSVQPASSTGSPSDPPVEGACRERARERGRPQERRYHSVTGEKQRYYSC
ERYGARDPGHARSAGPSRSTSPGEGPDAGLLKLVKGTPPVQTSGSTTPRGRRQLPQTPLT
PRPAVAYKTAHSSPVQPAATPPCRLSRGLSEHDALLSGHDRSPVPVTRIGSDPNLSPRAW
DRPPRGLLEETEDFQDAVSTHGGPRASPRTAAPASTPASRGGGVGPSTAPTQGRAGVPNG
FHFTLGVNAGARGTGGFREREEEEDWC
NT seq
6564 nt
NT seq
+upstream
nt +downstream
nt
atgaggcgaccgacccccgaaaactccacatgggcggaaaggcgttcaactgtggtttat
gccttgcgctctaccacctttaacacttggaggatgctgactatgggtgcggaatacggc
gcctgggctcagtctccagcgggattccgtagacggcaagctgtggtgtgtgacagcgat
gatgaaactgacagttgtgttgaccatgaacagtcatggagaaccgagaatatggataat
acacagtatgacagagtttatcaactcagtgagcccgttgcttccgaagagagaggcata
cgacgcattattcgtaaacacgacgccctgaacagcacaccttggtccagcaacagaatg
gctcgcttcgcagaagatctacccacccgctatggtggcggaggcggcggtagaggggcg
ccgggcgccggtagagggggagcccgggttggtggtgctccaggcggccaaaggatgtac
aagcagtcgatggctcagagagccaggacaatggctatatacaaccccaaccctgtcaaa
cagaactgcttcactgtcaaccggtccttgttcatctttcgagaggacaatctcataagg
aagtatgcaaagcgaataactgaatggcctccgtttgagtacatgatactggcaaccatc
atcgcaaactgtatcgtgctggcgctggaacaacacctgccggccagcgacaagacgccc
atgtcagaacgcctggacgacacagagccctactttattggaatattctgttttgaggcc
ggcattaagatcattgccctgggctttgcgtttcacaaaggctcctacctccgaaacggc
tggaacgtaatggacttcgtggtcgtcctcactggctgtgctctgctccctcgtggtttc
cagtctggtagaacagaacctgccaagatggcggcagcacagacagctttccgctcgctt
gcatctctcccaggccagatacttgcatactggatcggacccaacttcggcatcaccaac
ttcgacaacatcctgtttgccgtgctcacggtcttccagtgcatcaccatggagggctgg
gtggacatcctctacaacgccaacgatgcctcggggaacacgtggaactggctctacttc
atccctctcatcatcatcggctccttcttcatgcttaacctggtgctgggagtcctgtca
ggggagtttgccaaggagagagagcgtgtggagaagaggcaggagttcctgaagctgcgc
agacagcagcagatcgagagggagctgactggatacctggagtggatctgcaaggcggag
gaggtgctgctggcggaggaggatgagaacgcggaggagcgctcacccctggacgtgctg
aaacgagggaaggtgaaaaagggcaagaacgacctgatcgcagaagaagaaggagtggat
cacttcacggacctgtcctccgcagtccccccaggctccccgttcgggcgtgccagtgtg
aagagcagtaagatggacagctcttcgtatttccgtcggaaggagaagaggattcgcttc
ttcatccggcgcatggtgaaggcccagagcttctactggatcgtcctgtgcctggtgggg
ctgaacacgctgtgcgtcgccatcgtgcactacgaccagcccgactggctgaccaaggct
ctctacctggcggagtttgtgttcctcgggctgttcctgtctgagatggccttgaagatg
tacggcctgggagcccggaactacttccactcctctttcaactgctttgactttggcgtg
atagttgggagtattttcgaggtgatctgggcgatgatcaaaccaggagcctcgtttggc
atcagtgttctgagagcgcttcgtttgcttaggatatttaaagtcactaagtactggaac
tctctgaggaacctggtggtgtctctgctcaactccatgaagtccatcatcagcttgctg
ttcctcctcttcctcttcatcgtggtgtttgctctgctgggcatgcagctgttcggagga
cagttcaactttgaagaagagactccaaccaccaactttgatactttcccggcggccatt
ttgaccgtgtttcagattctgacgggggaggattggaacgcggtcatgtatcacgggatc
gagtctcagggcggcgttcggaggggaatgttctcttccgtctacttcatcgttctcacg
ctcttcggaaactacacgctcctgaacgtcttcttggccatcgccgtcgacaaccttgcg
aacgcccaggagctgaccaaggacgaggagcagcaggaggaggcagccaataagaagctg
gccttgcagaaagccatggaggtgaaggaagtcagtcccatgtcagcggccaatatctcc
atcgctgcttttgtaaagcaaaatcgagaggcgctctctcgcaggtcttccgtctccagc
atacactcacccatggagcagcagcgttgcaacaaggccatgtcggtgtgggagcagcgc
accaacgtgctgcgacgccacaacctgcgagcgagcagcgaggcgctcttcaacgagctg
gaccccgaggaacgcctccgtgtgtcctccgccctcaacctgcgccccgacatgaagacc
cacctggaccgccccctggtggtggaggcggggaacgccgacaagccccgccccccggag
gcggagccctgcgacgaggcgccgtcggacggccaggccccggtgtcctcgtcctccgcg
cacccccgcaaacaccaccggcaccgggagaggcccggggagaacggcggggcggcggag
gggagaggcagccgacaccacgcccatcacagccgcggtcgggagcagggggacggcccc
cggggcctccaggggacgggcgagaggagccgggaggggggcccgacccgcaagcaccac
caccagggaggctccccggaggagggcgggggggtgaacgggggcgaggagagggaccat
cggcaccaccacgcccaccacccgccccgggagggcaacggcgccctggcgaacggggcg
agggcggagcggcgggggcgaggccagcgggacgggggaggggaggggaacggggagcgc
aggagacaccgcacgcggatggtgcgagcccagtccactctggacggggaggaggggaga
gagagcggagagagggagggggagaggggcgccggaggacacaggagcaggcagatggat
ccagagactggcccccctcccggaggggcccccctcgggcccccgctggcccctgaagga
ctgctgagagaagaaggggagaaacaggaggatgaggacaacctgaagaacaccacgcgt
gacggccgggccggcctcaacagcaacaccatccacatcccagttaccgtcacctccccc
cctggggagaccaccgtcatacccatgaacaacatagactgtgagagcctggctctggcg
gaggagaagaaggatctggaagagaatggtgccccgggccccagacacatcctgccctac
agctccatgttcgtgttcggacagaccaacccggtgcgtcgcctgtgtcactacgtggtg
aacctgcgttactttgagatgtgcattttgatggtgatcaccatgagcagcatcgccctg
gcggccgaggaccccgtccaggctaacgctccgcgcaacaacgtgctcaagtatctggat
tacgtgttcactggggtgttcaccttcgagatggtgattaagatgattgacctcggcctc
atcctccaccctggcgcgtatttccgggacttgtggaacatcctggacttcatcgtggtc
actggggctctggtggccttcgcctgctcgagccttatgggatcgcagcaaagcgtggcc
agagggaccaaaggcaaagacatcaacaccatcaagtctctcagggtgctgcgtgtgcta
cgacccctcaagaccatcaaacggctgcccaagctcaaggcggtgtttgactgcgtggtc
aactctctgaagaacgtgctgaacatcctcatcgtgtacatgctgttcatgttcatcttc
gccgtcatcgccgtgcagctcttcaaggggaagttcttctactgcaccgacgagtccaag
ggcctcgagaaggactgcagaggtcagttcctggactatgaccatgacgaggtggcagcc
cagcccagggagtggaggaagtacgagttccactacgacaacgtcctctgggccttcctc
accctcttcactgtctccaccggagagggctggccaatggtcctaaagcactcggttgac
gccacatacgaggaccagggtcctagtccggggttccgcatggaaacgtccatcttctac
gtggtgtactttgtggtgttccccttcttcttcgtcaacatattcgtggccctcatcatc
atcaccttccaggagcagggagacaaggccatgtcagagtgtagcctggagaagaacgag
agagcgtgtatcgactttgccatcaatgccaggccgctgacccgctacatgccccagaac
aagcagtccttccagtacaagatgtggaagttcgtggtgtctccaccctttgaatactcc
atcatgaccatgatcgccctcaacaccgtggtgctcatgatgaagttccacggagcccca
gacctgtatgagtccatgctgaagtacctgaacatcgtgttcaccagcctcttcaccctg
gagtgcatcctgaagatcatcgccttcggaccgctgaactatctgaaagcagcgtggaac
gtgtttgactttgtgaccgtgnctgggagcatcacagacatcttggtcacggagatcaag
gtgctcttggccactttgaactcctcgttctctcttcagcgattggtcaggatgaatatg
cccatcgccgatgacaacacggtgcatttcacttccaccctgatggctctgatccgcaca
gctctggagataaagctggcgtcaggggtattggcccagaggctttgtgacgctgagctg
aagagagagatctccagagtctggcccaaccttcaacagaagactgtcgacctactggtt
acaccccataaacacaaggagctgacagtggggaaggtctacgccgccctcatgatcttc
gactactacaagcagaaccgagccaagaagctccagcagcagcaggctccagggagcacg
cagagacaagggggttccctctttagacccatgctgcccctcgcccacatacaggagcag
gacacgccccctctcagcctccaggccgacaccccctcgcagcctgaggccccgcccacc
accacctcgctaaccaatgacaatgcagtaacaagccagacagatgccataagggaatca
gaggatgcaccaactttacaaaacctcagtaacggcaacgaatctttggagacgagtcgg
ctggagaacgattcggacgtggagggcttccccnntggagggccgtggcagagccgcctc
atgcccaggctcaacgctgaatactaccggagccaccctcgccacgcccctgggacccac
ctggcacccatcgctgacctcagccccatccgccgctcggcgtccacgctgaccccccaa
cgccccctggaggcgggtttgggggactatgccctgcagcggcccgcccaggggtcggcg
acggggcaggacagggcgcaccaccgccatcaccaccacagctgccagcgacgccgggac
aaggacaggaagcagaagtctctggatggagcgaccagtgttcagcctgccagcagcacg
ggttccccctccgacccccctgtggagggggcgtgcagggagagggcgcgggaacgcggg
cggccccaggagcggaggtaccactcggtgacgggggagaagcagcggtactactcctgc
gagcgctacggagccagggaccccggccacgcccgctctgccgggcccagccgctccacc
tcaccgggggagggccccgacgccggcctgctcaaactggttaaaggaacccccccggtc
cagacctcaggctccacgacacccagagggcgtcggcagcttccccagacccccctcacc
ccccggccggccgtggcctacaagaccgcccactcctcgcccgtccaacccgccgcaacg
cccccctgccgcctcagcagggggctgtccgagcacgacgccctccttagcggccacgac
cgatcccccgtaccggtcacccgcatcggctccgaccccaacctgagcccccgggcgtgg
gacaggcctccacgcggcctcctggaggagacggaggacttccaggacgccgtgagcacc
cacggagggcccagagcctctcccaggacagctgccccggcctcgaccccggcctcacgc
ggggggggcgtcgggccctccacggcccccacacagggcagggcgggggtaccgaacggg
ttccacttcaccctgggggtcaacgccggcgccaggggcactggagggtttcgggagagg
gaggaggaggaggactggtgctag
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