Osmerus eperlanus (European smelt): 134033996
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Entry
134033996 CDS
T10927
Symbol
cacna1ha
Name
(RefSeq) LOW QUALITY PROTEIN: voltage-dependent T-type calcium channel subunit alpha-1H
KO
K04855
voltage-dependent calcium channel T type alpha-1H
Organism
oep Osmerus eperlanus (European smelt)
Pathway
oep04010
MAPK signaling pathway
oep04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
oep00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
134033996 (cacna1ha)
04020 Calcium signaling pathway
134033996 (cacna1ha)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
oep04040
]
134033996 (cacna1ha)
Ion channels [BR:
oep04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
134033996 (cacna1ha)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
PKD_channel
Motif
Other DBs
NCBI-GeneID:
134033996
NCBI-ProteinID:
XP_062334279
LinkDB
All DBs
Position
2:complement(345995..374810)
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AA seq
2100 aa
AA seq
DB search
MGLFQTQIRLWFLNSVITLEGWVDIMYYVMDAHSFYNFIYFILLIIVGSFFMINLCLVVI
ATQFSETKQRENALMREQRARYMSNDSTLASYSEPGSCYEEMLRYVSHLYRKLTRRLQRV
YISWHSKRRKKVNPNGGGGASGQGGSRSSSGSAPWLRPLHALLQHHQHHHCHLSNGGHSV
VATTSGEELEMRSLGPQEPVRPPGGHPGVTPGMGALLGRLNGGMNYPTILPSFICSYSSS
SASHPHSPGPRPLHQHTDTLNKLHQLMGQHSRQRLLYQLAGVVPSPLLLELLSCPLCARA
LESLELDLGGQDAPRGEADTVHDFPQGGEAWRGRGRARRRPVLEQRSRVAQLWGRFRDRL
KRIVDSKYFNRGIMIAILINTLSMGIEYHEQPEELTDVLEISNIVFTSMFVLEMVFKLWA
FGLFGYIKNPYNIFDGIIVIISVWXIIGQADGGLSVLRTFRLLRVLKLVRFLPALRRQLV
VLMKTMDNVATFCMLLMLFIFTFSILGMHLFGCKFSVQTENGDTVPDRKNFDSLLWAIVT
VFQILTQEDWNVVLYNXMASTSPLAALYFITLMTFGNYVLFNLLVAILVEGFQAEGDANR
SDSDEEKKSDNFEEEEKVEQLRDSELKMYSLMMTANGHIDPRGTLAPPIIMRTAATPMPT
PKSSLGPESILGEGFMYQEEGLLYGEAGLGFAGESRRGSSASIDPSAYDQRSLSSPGRRS
PLGPRRSPLCPRPPGSWSSRRSSWNSLGRAPSLKRRDTSGERESLLSGEGGEEGREEEEG
REEEEAGAGGKGQGPGGRGHPGSLELLQASSLCPALAGEYGGCNGRSLHVTYDPNIHPDL
GKDDSSPEDDMEDDSMCFRVRRMLRSHKPRWCREHEDFTLYLFSPENPCRVWCKRLISHR
MFDHVVLVFIFLNCITIALERPDILPHSTERVFLSVSNYVFTVIFLAEMGVKVVALGFCW
GKQTYLQSSWNVLDGLLVFVSLVDILVSVASSGGNKILGILRVLRLLRTLRPLRVISRAP
GLKLVVETLITSLRPIGNIVLICCAFFIVFGILGVQLFKGKFYHCEGEDTRNITNRSDCL
QAQYRWIRRKYNFDNLGQALMSLFVLSCKDGWVNIMYDGLDAVGVDQQPVRNHNPWMLLF
FISFLLIVSFFVLNMFVGVVVENFHKCRQDQEEEEAKLRDEKRVKILEKKRRKAQQRPYY
ADYSPLRVSIHTLCTSHHLDLFITVIICINVITMSLEHYDQPQYLEEILKYCNYVFTFIF
IIEAVLKMVAFGLRRFFKDRWNQLDLAIVLLSIMGITLEEIKMSAALPINPTIIRIMRVL
RIARVLKLLKMATGMRSLLDTVMQALPQVGNLGLLFMLLFFIYAALGVELFGKLECNDSN
PCEGLSRHATFENFGMAFLTLFRVSTGDNWNGIMKDTLRECRPEERSCLSYLPLVSPLYF
VTFVLIAQFVLVNVVVAVLMKHLEESNKEAKEEAEMDAEIQLEMERARRVSSASNTSSLG
GNYVGPRPHSPGQEEEVNCAQENLLSPRKMSVSRMHSLPNDSYMFQPVRPASAPYLLEEV
EPSPQHQHSGSVTSIHSQPCEGRGLLQVPSLSPPPLPLLPPAPPHALTLPRIAPPRPSTS
PRPSTSPRPSTSPRPSTSPRPSTSPRPSTSPRALCRQVAVKVDSVESPGWEQHQDRAEAL
PRPPAPPSDPQVSPCLPPRPLSSDPQASPRSPPSLGDPADDEVCHITSSAHHRRRYHEGH
GGRSHSLSPYATPLPPPALRSRGSALSLLGAGLRERDLRKGFSVDTQGFLDTPPGCPDDH
RRHSIEICPPQPKEEEGGEKGGRAFPVRVQSVGGGHRKKKMSPPCISIHPPPEREAPPPP
EREAPPPPELSDCSMMLRRRTPSFHTHTTSHTHTTSHTHTPSHTHTPSHTHTADLPETPP
HTHTPTHTHTPTHTHTPLHTHTPLHTADLPDTPTHTLLPAHTPTHPPKQTHTLAAMSGHT
LTHPLTHTHPLTHTHPLTHTHTLTHTHPLTHTHPLTPTHTHSISLSHTSTHMPSSTSRHP
SLCTDHVPVPQFTFDQSEARYVSDLSTVLSDSDPAICPSPFDNRLEGEKGFSSMNRRTAQ
NT seq
6303 nt
NT seq
+upstream
nt +downstream
nt
atgggtctatttcaaacccagatcagattatggtttttgaattcagttatcactctggaa
ggatgggttgacatcatgtactatgttatggatgctcactccttctacaattttatatat
tttatactactcatcattgtgggctcattcttcatgatcaacctgtgcctggtggtcatc
gccacgcagttctctgagacgaagcagcgagagaacgccctgatgcgcgagcagcgagct
cgctacatgtccaatgactccacgctggccagctacagcgagccgggctcctgctacgag
gagatgctcagatacgtcagccacctctaccggaaactcacacgcaggctgcagagagtc
tacatcagctggcacagcaaacgccgcaagaaggtgaaccccaacggagggggcggggcc
tcgggccaggggggcagtcgaagcagctccgggagcgccccctggctccgccccctccac
gccctcctgcagcatcaccagcaccaccactgtcaccttagcaacggcggacatagtgtc
gtggcaactacgtccggggaggagctggagatgaggtcgctgggccctcaggagccggtc
aggccccctgggggtcaccccggggtgactcccgggatgggggctctcctggggaggctg
aacggggggatgaactaccccaccatcctgccctccttcatctgcagctacagcagcagc
tccgcctcccaccctcacagccccggcccccggcccctgcaccagcacacagacacactc
aacaagctgcaccagctcatgggacagcacagtcgtcagaggctgctgtaccagctggcg
ggcgtggtgcccagccccctgctgctggagctgctgtcctgcccgctgtgtgctcgcgcc
ctggagagcctggagctggacctgggcgggcaggacgcgcccaggggggaggcagacact
gtgcacgacttcccccagggaggagaggcgtggcgcgggcgcggcagggcccggcgcagg
cccgtgctggagcagaggagccgtgtggctcagctgtgggggcgcttcagagacaggctg
aaacgtatcgtggacagcaaatacttcaacagagggatcatgatagcaatcctcatcaac
actctcagcatgggcatcgagtaccatgaacagccagaggagctgacagatgttctggag
atcagtaacatcgtcttcaccagcatgtttgtgctggagatggtcttcaagctctgggct
ttcgggctgttcggctacattaagaacccctacaacatctttgatggcatcatcgtcatc
atcagcgtgtggnagatcatcggccaggcggacggagggctctcagtgctgcgcacgttc
cgtctcctgcgtgtgctgaagctggtcaggttcctgcccgctctgaggaggcagctggtg
gtcctgatgaagaccatggacaacgtggccaccttctgcatgctgctcatgctgttcatc
ttcaccttcagcatcctgggcatgcacctgtttggctgtaagttcagtgtgcagacagag
aatggagacaccgtcccagaccgcaagaacttcgactccctgctgtgggccatcgtcact
gtgttccagatcctgactcaggaggactggaatgtggtgttgtataatngcatggcctcc
acctctcccctggctgctctctacttcatcactctcatgaccttcgggaactacgtcctc
ttcaacctgctggtggccatcttggtggagggctttcaggctgagggggatgccaaccgt
tcagactctgatgaggagaagaagtctgacaactttgaggaggaggagaaggtggagcag
ctccgagactcagagctgaagatgtactctctgatgatgacggccaacggccacatagat
ccacgtggcacgttggctcctcctattattatgcgaacagcagccacacccatgcccaca
cccaagagttcattgggccctgagtccattctaggggaggggtttatgtaccaagaggag
gggcttctgtacggagaggcggggttgggcttcgctggagagtctcgtcgtggtagctcc
gcctccattgatccctcagcctatgaccagcgatctctgtccagccctggccggcgctcc
cccctgggcccccggcgctcccccctgtgcccccggccccccggctcctggagcagccgc
cggtccagctggaacagcctcggacgagcccccagcctcaagcgcagggacacaagcgga
gagagggagagcctgctgtctggggagggaggggaggaggggagggaggaggaggagggg
agggaggaggaggaggctggagcagggggcaaggggcaggggccagggggcagggggcac
ccggggtctttggagcttctgcaggcgtcctccctgtgcccggcgctagcaggcgagtat
gggggctgtaatggccggagcctccacgtgacctacgaccccaacatccatcctgacctg
gggaaggatgactcctctcctgaggatgacatggaggacgatagcatgtgtttccgggtc
aggagaatgctgcgcagccacaagcctcgctggtgtagagagcatgaagactttactctc
tacctgttctccccagagaacccgtgtcgtgtgtggtgcaagaggttgatctcacacagg
atgttcgatcatgtggtcctggtcttcatcttcctcaactgcatcaccatcgctctggag
agaccagatatactgccccacagcacggagcgagtgtttctgagtgtgtccaactatgtg
ttcactgtgatcttcctggcagagatgggagtgaaggtggtggcgctgggtttctgctgg
gggaagcagacctacctgcagagcagctggaacgttctggatggtctgctggtgttcgtg
tccctggtggacatcctggtgtccgtggcatcatcgggagggaacaagatcctgggcatc
ctcagagtcctgcgcctcctacgcaccctccgccctctcagggtgatcagcagagctcca
ggtctgaagctggtggtggagactctcatcacatctctcaggcccataggaaacatcgtc
ctcatctgctgtgcattcttcatcgtgtttggaatactgggggtgcagctcttcaagggg
aagttctaccactgtgagggtgaggataccaggaacatcactaacaggtccgactgcctg
caggctcagtaccgctggatacgcaggaaatacaactttgataacctgggacaggctctg
atgtctctcttcgtgctgtcctgtaaggatggttgggttaacatcatgtatgatggtctg
gatgctgttggagtggatcagcagccggtgaggaaccacaatccctggatgctgctgttc
ttcatctccttcctgctcatcgtgagcttcttcgtgctgaacatgttcgtgggcgtggtg
gtggagaacttccacaagtgccgtcaggaccaggaggaggaggaggcgaagctgcgggac
gagaagagggtcaagatcctggagaaaaagcgcaggaaggctcaacagaggccctactac
gcagattactctcccctgcgtgtgtccatccacaccctgtgcaccagccaccacctggac
ctgttcatcactgtcatcatctgcatcaacgtcatcaccatgtctctggagcactacgac
cagcctcagtacctggaggagattctgaagtactgtaactacgtcttcaccttcatcttc
atcatcgaggctgtcctgaagatggtagcctttggactgcgacgcttcttcaaggacagg
tggaaccagctggacctggccatagtgctgctgtccatcatgggcatcactctggaggag
attaagatgagcgccgccctgcccatcaaccccaccatcatcaggatcatgagggttctg
aggatcgcacgagtgctgaagctgttgaagatggcaactgggatgagatctctactggac
actgtcatgcaggcactgccccaggtggggaatctaggtttgctcttcatgttgctgttc
ttcatctacgcagcgcttggagtcgagctcttcgggaaactggagtgtaacgacagcaac
ccatgtgagggtctgagtcgtcacgccacatttgagaactttgggatggcctttctcacg
ctgttcagagtgtcaaccggagacaactggaacggcatcatgaaggacaccctgcgtgag
tgcaggccagaggagcgctcctgtctgtcctacctgcccctggtgtctcctctgtacttc
gtcacctttgtgctgatcgctcagtttgtgctggtgaacgtggtggtggcggtgctgatg
aagcacctggaggagagcaacaaggaggccaaggaggaggcagagatggacgcggagatc
cagctggagatggagagagcccgccgtgttagctccgcctccaacaccagctcgctgggc
gggaactatgtggggccacgcccacactcccccggacaggaggaggaagtgaactgcgcc
caagagaatttgctgtcgccaaggaagatgtctgtatccaggatgcactctctgcccaat
gacagctacatgttccagcccgtccgccccgctagcgccccctaccttctggaggaggtg
gagcccagcccacagcaccagcactcaggctcagtgacgtctatccactcccagccgtgt
gaggggcgtggcttgttgcaggttcccagcctctcccctcctcccctccccctcctcccc
cctgctcccccacacgccctcacccttccacgcatcgcccctcccaggcccagcacctca
cccaggcccagcacctcacccaggcccagcacctcacccaggcccagcacctcacccagg
cccagcacctcacccaggcccagcacctcgcccagggccctttgtagacaggtagctgtt
aaggtggattcagttgagtccccaggctgggagcagcaccaagacagagcagaggccctc
cccaggcctccagccccgcccagcgacccccaggtctccccctgcttgcccccccgcccc
ttgagcagcgacccccaggcctccccccgctccccaccttccctgggcgacccagctgac
gatgaggtgtgtcacatcacaagctcagctcaccatcggaggaggtaccatgaggggcac
ggtgggcgcagccactccctctccccgtacgccacgcccctccccccgcctgccctgagg
agccgagggagcgcgctcagtctgctgggggcggggcttagggagcgcgacctcaggaag
ggcttcagcgtggacacacagggcttcctggacacgccccccggttgccctgatgaccat
cggcgccactccatcgagatctgccccccccagcccaaggaggaggagggaggtgagaag
gggggtagggccttccctgtcagggtccagtcagtggggggggggcataggaagaagaag
atgagccccccttgcatctccatccacccgccccccgagagggaggcccccccgcccccc
gagagggaggcccccccgccccccgagctgtctgactgcagcatgatgctgaggaggagg
accccatcattccacacacacaccacctcacacacacacaccacctcacacacacacacc
ccctcacacacacacaccccctcacacacacacactgccgacctcccagagaccccccca
cacacacacacccccacacacacacacacccccacacacacacacacacccttacacaca
cacacccccttacacaccgccgacctcccagacacccccacacacacactcctgcctgca
cacaccccgacacacccccccaagcagacacacacactggcagccatgtctggccataca
ctcacacaccccctcacacacacacaccccctcacacacacacaccccctcacacacaca
cacaccctcacacacacacaccccctcacacacacacaccccctcacccctactcacact
cacagtatctctctgtctcacacatccacacacatgccgtcttccacctcaagacacccc
tccctctgcactgaccatgttcccgtcccccagttcacctttgaccaatcagaagccaga
tatgtgagtgacttgtcaaccgttctatcagacagtgatccggccatatgtccctccccc
tttgacaacagactggagggggagaaggggttcagctcgatgaacaggaggactgcccag
tga
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integrated database retrieval system
