Osmerus eperlanus (European smelt): 134034042
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Entry
134034042 CDS
T10927
Symbol
rnf34b
Name
(RefSeq) E3 ubiquitin-protein ligase RNF34 isoform X1
KO
K20804
E3 ubiquitin-protein ligase RNF34 [EC:
2.3.2.31
]
Organism
oep Osmerus eperlanus (European smelt)
Brite
KEGG Orthology (KO) [BR:
oep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
oep04121
]
134034042 (rnf34b)
Enzymes [BR:
oep01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
134034042 (rnf34b)
Ubiquitin system [BR:
oep04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
134034042 (rnf34b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAP_RNF34_RFFL
RNF34L-like_3rd
zf-C3HC4_3
FYVE_CARP1-2
ARMET_C
Prok-RING_4
zf-C3HC4_2
zf-RING_5
GAGBD
Motif
Other DBs
NCBI-GeneID:
134034042
NCBI-ProteinID:
XP_062334351
LinkDB
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Position
14:15049933..15063380
Genome browser
AA seq
407 aa
AA seq
DB search
MKAGASSMWASCCGLLNEVIGTGTVRAQQPGFGAGAGPFRFAPSAGYSTYPPTTSGSAGQ
LCKACGLAFSVFRRKHMCSDCKRSFCALCSVPQEDLRCCTTCHLLRATCFQRPRLMQLRV
KDLRQYLLLRNIPTDTCREKEDLVDLVLCHQGAAGTPRPLGANQEQEEEGEELEEEGEEL
EEEGPVDTDSLHSPAHSLQATPPSPARSPSELSVVSASQEDALSRSDSSGTPSQDHVEIP
TVSLLNLEPVENIPEVSPATQRRVRASLSDLEHEGDIKNLSVRQLKEILARNFVNYSGCC
EKWELMERVHRLYRENEHNRKSMENVSNSITAVVAYPRPGCNGGVGDGTRTQLALDDNLC
RICMDAVIDCVLLECGHMVTCTKCGKRMSECPICRQYVVRAVHVFKS
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atgaaggcgggggcatcgtcgatgtgggcgtcctgctgcgggctgctgaacgaggtgatc
gggacgggcacggtgcgggcgcagcagcctggcttcggcgccggggcggggccattccgc
ttcgcccccagcgcagggtactccacctacccccccaccacctcagggagcgccgggcag
ctgtgcaaggcctgcggactggccttctctgtgttcagacgcaagcacatgtgctcggac
tgcaagaggagcttctgcgctctgtgctcggtgccgcaggaggacctgcgctgctgcacc
acctgccacctgctccgcgccacctgcttccagcggccgcgcctcatgcagctgcgcgtc
aaagacctgcgccagtacctgctcctgcgcaacatccccacggacacctgccgggagaag
gaggacctggtggatctggtgctctgccaccagggggcagcgggcacccctcgaccgctg
ggtgcgaaccaggagcaggaggaggagggggaggagcttgaggaggagggggaggagctt
gaggaggaagggccggttgatacggacagtcttcactcgccggctcactcgctccaggcc
acgcccccgtcccccgcacgctccccgtccgaactgtcggtggtgtctgcctctcaggaa
gacgcgctcagccggagtgacagctcagggacccctagtcaggaccacgtggagattccg
actgtgtcgcttctgaacctggaacccgtcgagaacatcccagaggtcagcccggccaca
cagaggagggtgcgcgcctctctctctgacctggaacacgaaggagacatcaagaacctg
tctgtccgccagctcaaagagatcctggccaggaactttgtgaactactccggctgctgt
gagaagtgggagctgatggagagggtgcatcggctctaccgggagaacgagcacaacagg
aagtccatggaaaatgtcagcaacagcataacagcagtggtggcgtatcctcgtccaggg
tgtaatggcggggttggagacggcacgaggacgcagctggcgctggacgacaacctgtgc
cgcatctgcatggacgccgtcatcgactgcgtgctcctggagtgcggtcacatggtcacg
tgcaccaagtgtggcaagaggatgagcgagtgccccatctgccggcagtacgtggtgagg
gccgtgcacgtcttcaagtcctag
DBGET
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