Osmerus eperlanus (European smelt): 134034152
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Entry
134034152 CDS
T10927
Symbol
chrna6
Name
(RefSeq) neuronal acetylcholine receptor subunit alpha-6
KO
K04808
nicotinic acetylcholine receptor alpha-6
Organism
oep Osmerus eperlanus (European smelt)
Pathway
oep04080
Neuroactive ligand-receptor interaction
oep04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
oep00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
134034152 (chrna6)
04082 Neuroactive ligand signaling
134034152 (chrna6)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
oep04040
]
134034152 (chrna6)
Ion channels [BR:
oep04040
]
Ligand-gated channels
Acetylcholine (nicotinic)
134034152 (chrna6)
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Gene cluster
GFIT
Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
Pyr4-TMTC
DUF5363
Red1
Motif
Other DBs
NCBI-GeneID:
134034152
NCBI-ProteinID:
XP_062334505
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Position
14:11776583..11789040
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AA seq
523 aa
AA seq
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MHPALRGTLLLLLFLLITQDCFSSKAEDRLFRKLFRKYNQFIRPVENVSDPVTVEFEVSM
SQLVKVDEVNQIMETNLWLRHIWNDYKLKWAPVEFDGIEFIRVPSNKIWRPDIVLYNNAV
GDFLVEDKTKALLKFDGTITWVPPAIFKSSCPMDITYFPFDYQNCSMKFGSWTYDKAKID
LVLIGSKVNLKDFWESGEWEIIDAPGYKHDIKYNCCEEIYPDITYSFYIRRLPLFYTINL
IIPCLLISFLTVLVFYLPSDCGEKVTLCISVLLSLTVFLLVITETIPSTSLVIPLIGEYL
LFTMIFVTLSIVITVFVLNVHYRTPMTHTMPGWVRSVFLSILPRVMLMRRPLDQDGKAVG
VQSFGEGGGSGGRAGGSGGKGAKKRKNSLSQQSGGGSVNCLDFGENKLSVEGGCAGKKCP
CPCQHGKETPETADPGKLSRQLSHQSVNTVVAFSMVSPEIKQAIESVKYIAENMRSRNKA
KEVEDDWKYVAMVIDRIFLWVFITVCILGTLGLFLRPVIGFLS
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atgcatcctgccttaagagggactttgttacttcttctcttcttgttaattacgcaagac
tgtttctcctccaaggctgaggacaggctcttcaggaagctcttcaggaagtataaccag
ttcatccggcccgtggagaacgtgtccgatcccgtcactgtggagttcgaggtctccatg
tcccagctggtcaaagtggatgaggtgaatcagatcatggagaccaatctgtggctgaga
catatctggaatgactacaagttgaagtgggccccggtggagtttgatgggatagagttc
atcagagttccatccaacaagatctggagaccagacatcgtgctttacaacaatgctgtg
ggggacttcctggtggaggacaagaccaaggctctgctgaagtttgacggcaccatcact
tgggtcccccctgccatcttcaagtcctcctgccccatggacatcacctacttccccttc
gactaccagaactgctccatgaagttcggctcatggacctacgacaaggccaagatcgac
ctagtcctcatcggctccaaggtcaatctcaaagacttctgggagagcggggagtgggag
atcattgacgcgccgggctacaaacacgacatcaagtacaactgctgtgaggagatctac
cccgacatcacctactccttctacatccggagacttccacttttctacaccatcaacctc
atcatcccctgcctgctcatctccttcctcaccgtgctggtcttctacctgccctccgac
tgcggggagaaggtcaccctctgcatctccgtcctcctctccctcaccgtgttcctgctg
gtcatcaccgagaccatcccctccacctcactggtcatccccctcatcggcgagtacctg
ctcttcaccatgatcttcgtcacgctcagcatcgtcatcaccgtcttcgtgctcaacgtg
cactaccgcacccccatgacccacaccatgcccgggtgggtgcgctccgtgttcctcagc
atcctgcccagggtgatgctcatgaggaggccgctggaccaggacggcaaggccgtgggg
gtgcagagcttcggtgaggggggaggatccggaggcagggccggagggagcgggggaaag
ggagcgaagaagaggaagaacagtctctcacagcaaagcggaggaggctcggtcaactgc
ctggactttggagaaaacaagctctccgtggaaggaggctgcgctggcaagaagtgtccc
tgcccttgccagcacggcaaggaaaccccagagacagcagaccctgggaagctgagtcgc
caactgagtcaccagagcgtcaacacggtggtggcgttctccatggtgtcacctgagatc
aaacaggccatcgagagtgtcaaatacatcgcagagaacatgaggagtcggaacaaggcc
aaagaggtggaggatgactggaagtatgttgccatggtgatcgacaggatattcctttgg
gtctttataacggtctgcatccttggaaccctgggcctcttcctgcggcctgtcattggc
tttctgtcataa
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