Osmerus eperlanus (European smelt): 134034305
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Entry
134034305 CDS
T10927
Symbol
zcchc7
Name
(RefSeq) zinc finger CCHC domain-containing protein 7 isoform X1
KO
K12597
protein AIR1/2
Organism
oep Osmerus eperlanus (European smelt)
Pathway
oep03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
oep00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
134034305 (zcchc7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oep03019
]
134034305 (zcchc7)
03016 Transfer RNA biogenesis [BR:
oep03016
]
134034305 (zcchc7)
Messenger RNA biogenesis [BR:
oep03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
TRAMP complex
134034305 (zcchc7)
Transfer RNA biogenesis [BR:
oep03016
]
Eukaryotic type
tRNA degradation factors
TRAMP complex
134034305 (zcchc7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCHC
zf-CCHC_2
Motif
Other DBs
NCBI-GeneID:
134034305
NCBI-ProteinID:
XP_062334750
LinkDB
All DBs
Position
14:complement(8385607..8414268)
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AA seq
666 aa
AA seq
DB search
MFCSYQEREEVEDELYAEDESEGSEVDSELELQLYSQLHYASNTGEREKEGEKEGQKEGE
KETEQHQPTQSHDEGENYIRQLLQRHTERSQEAAAKKQVKEVKGRRSIQAQVIVIDSSTE
VITISEDDTDDGVCHVKGQRLGPKPRPLKASILAQQKKKKRKKKRRSPSLDSVVVLISEE
SGSQSQSLPGSESESLPGSESESRPKSHPGSESESDGLESWMFLGGGRQKEDSSIQLNLE
GGGHSNAGDIGDVGGVWVVSGKDREAQISNREKNQPFRRVSSRYYTDKNVTCINCNKTGH
LSKSCSEPRKVPCCALCGQPGHLMRVCPSRHCLNCGLPGHLYQACLEHSYWHKHCHRCGM
TGHFQDACPEIWRQYHITIQAGPPKQLQSPDNGRTPPYCYNCSRKGHFGHDCSQRRMFNG
TYPSTPYINYYDIKGDFNRRDYRIQQRVQELIEAGLFPSELQTPHTPDGPPKKKQKNSAN
HCPKRSHTPYQNHKPVRIPNLIHNQKPIPAPGHSKPGQAKTWMPKTKMANKQQQHSKQKI
PKHLNTPKTSSVVKKPATLMVDEAQDFPRGGDQKKKKKKKKKKKKDGMVPEIPPVFFDTT
PSSSRPPQPGLHPPERLFGKGKTSAVKNKKIRARGRDRKAANMAANEMYPTDENLFIIKQ
KKRKSL
NT seq
2001 nt
NT seq
+upstream
nt +downstream
nt
atgttctgtagctaccaggagagggaggaagtggaggatgagctgtacgctgaggacgag
tcggaggggtcggaggtcgacagtgagctggagttgcagctgtatagtcagctgcactat
gcttccaacacgggagaaagggagaaggaaggagagaaggaaggacagaaggaaggagag
aaggaaaccgaacaacaccagcctacccagtcacatgacgagggtgagaactacatacgg
caactcctgcaacgtcacacagagcgaagtcaggaagcagcagcgaaaaagcaggtgaag
gaggtgaaaggtcgcaggtcaatccaggcgcaggtcattgtcatcgactcgagtaccgaa
gtcatcacaatctcagaggacgacacggacgacggggtgtgtcatgtgaaaggtcaaagg
ctgggaccaaagccacgccccctcaaagcctcgatactggcacagcagaagaagaagaag
aggaagaaaaagaggaggagccccagtctggactctgtggtggttctgatctcagaagag
tccggatcacaatcacaatcattgcctgggtcggaatcagaatcattgcctgggtcggaa
tcagaatcccggcccaaatctcacccagggtccgagtcggagtccgacggcctggagagc
tggatgttcctgggagggggccgacagaaggaggacagcagcattcagctcaacctggag
ggagggggccacagcaatgcaggtgacattggtgatgtaggtggagtctgggtggtgtca
ggcaaggatagagaggcccagatctctaaccgagagaagaatcagccattccgccgggtg
tcttccaggtactacacagataagaatgtcacctgcatcaactgcaacaagactggacat
ctgtccaagagctgttcggaacccaggaaggtgccatgctgtgcactgtgcgggcagcca
ggccacctcatgagggtgtgccccagcaggcactgtctgaactgtgggctcccaggccac
ctgtaccaggcctgcctggagcacagctactggcacaagcactgccatcgctgtgggatg
actgggcacttccaggacgcctgcccagaaatttggcgacagtaccacatcacgatccag
gcaggtcctccaaagcagctgcagtctccggataatggcagaactcctccctactgctac
aactgttccaggaaaggccactttggccatgactgttctcagaggagaatgtttaacgga
acatatcccagcaccccctacattaactactatgacatcaaaggggatttcaatcgcaga
gactaccgaatacagcagagggtccaagagctgatagaggctggcctgtttccttcagag
ctccagactccacacacaccagacggaccgcccaagaaaaaacagaaaaactcagccaac
cactgccctaaacgcagccacaccccttaccagaaccacaaaccagtgcgcatccctaat
ctcatccataaccagaaacccatacctgctcccgggcacagcaagccagggcaggccaaa
acatggatgcccaaaaccaagatggccaacaaacagcagcaacattcaaaacaaaaaatt
cccaaacatctgaacacccccaaaaccagttctgtagttaagaaaccagccacgttgatg
gtggatgaggctcaggacttccctcgaggtggagaccagaagaagaaaaagaagaaaaag
aagaagaagaagaaggatggtatggttcctgaaatcccccctgtgtttttcgacaccacc
ccgtcttcctcaagacccccccagcctgggctccaccccccagaaagactttttgggaaa
gggaagaccagcgcagtgaagaataagaagattagagcgagaggaagggacaggaaggca
gctaacatggccgccaatgagatgtaccccacagacgaaaacctgttcatcattaaacaa
aagaaacgcaagagtttatag
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