Osmerus eperlanus (European smelt): 134034348
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Entry
134034348 CDS
T10927
Symbol
psip1a
Name
(RefSeq) PC4 and SFRS1 interacting protein 1a isoform X1
KO
K25057
PC4 and SFRS1-interacting protein
Organism
oep Osmerus eperlanus (European smelt)
Pathway
oep03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
oep00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
134034348 (psip1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
oep03041
]
134034348 (psip1a)
Spliceosome [BR:
oep03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR-related proteins
134034348 (psip1a)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LEDGF
PWWP
Med26
MUM1-like_PWWP
Motif
Other DBs
NCBI-GeneID:
134034348
NCBI-ProteinID:
XP_062334842
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All DBs
Position
14:complement(17374494..17384318)
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AA seq
463 aa
AA seq
DB search
MARDFKPGDLIFAKMKGYPHWPARIDEVPDGAVKPSNIKFPIFFFGTHETAFLGPKDIFP
YLPNKDRYARPNKRKGFNEGLWEIENNPQVELNGPKMMPSDSMTEQDSDSNPELDEDGDE
KKKSKGSSGEAERDNEEEEMEEEVVMEVSEPGPQGQDSEADQDSEKEDAPASPSGKRRGR
KPKADKMTSLQDLHGSGSDMESAESDRKRKRAADERSRRGEEERRRRKDEGRARDEGKEP
DAKRKRQTKEESSSEDEEVRGHRRQHNTEEKDEGRRRKQDEGKEPGKDEGKKGDGERKDK
KKEIPTESRLQRLHGEIKISLKIDNPDVRKCLAALDELGSLQLNTQHLQKHSELISTLKK
IRRFKASQDVMDKASMLYNKFKSMFLVGEGEQALAQVLCRSTSEQKQYEEARKGALRRAE
LAREGDNKMTNGDTCPDEEKQESDTPADPSSGDSVAAVQQECI
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atggcacgggacttcaaaccaggtgacctgatttttgccaagatgaagggatatccccac
tggcctgccagaattgatgaagttccagatggagctgtaaaaccttccaacataaagttc
ccaatcttcttctttggaacccacgaaacagcattcctggggcccaaagatatattcccc
tacctgcccaacaaggacaggtatgccaggcccaacaagaggaagggcttcaacgagggg
ctctgggagattgagaacaacccccaagtggagctcaacggacccaagatgatgccgtct
gactcgatgacagagcaggattctgacagcaatccagaactggacgaggatggagatgag
aagaagaaatctaaaggttcgagcggggaggcagagcgagataatgaggaggaggaaatg
gaggaggaagttgtcatggaggtctctgaacccgggcctcagggccaggatagtgaagcc
gaccaggactcagagaaagaggatgcacccgccagcccttcaggtaagcgcagggggagg
aagcccaaggctgacaagatgacctcactgcaggatctccacggctcaggaagtgatatg
gagtctgcagagtctgacaggaagaggaagcgcgctgcggacgagcggtccaggagagga
gaggaagagaggaggaggaggaaggatgagggcagagccagggatgagggcaaggagccg
gacgctaagaggaagagacagaccaaggaggagagctcgtccgaggatgaggaggtcaga
ggtcacaggcggcagcacaacacggaggagaaagacgaggggaggagacgcaagcaggac
gaggggaaagaaccaggtaaagatgaagggaagaaaggagacggagagaggaaagacaag
aaaaaagaaatacccacagaatcacggctgcagaggttgcacggagaaatcaaaatctct
ctgaagattgacaacccggatgtgaggaagtgtctggcagcgctggatgagttggggtct
ctacagctcaacacacagcacctgcagaagcacagtgagcttatctccaccctcaagaag
atccggcggttcaaggctagccaggatgtcatggacaaggccagcatgctgtataacaaa
ttcaagagcatgttcctggtgggggagggggagcaggcgctggcccaggtgctctgcagg
tccaccagcgaacagaagcagtacgaggaggccaggaagggagccctgaggagggctgag
ctggccagggaaggagataacaagatgactaacggggacacgtgtccagatgaagagaag
caggagtcagacacacctgcagacccctcctcaggagacagtgttgctgctgtccagcag
gagtgtatctga
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