KEGG   Osmerus eperlanus (European smelt): 134034362
Entry
134034362         CDS       T10927                                 
Name
(RefSeq) trinucleotide repeat-containing gene 6B protein-like isoform X1
  KO
K18412  trinucleotide repeat-containing gene 6 protein
Organism
oep  Osmerus eperlanus (European smelt)
Brite
Messenger RNA biogenesis [BR:oep03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     134034362
Chromosome and associated proteins [BR:oep03036]
 Eukaryotic type
  Gene silencing
   piRNA pathway
    134034362
SSDB
Motif
Pfam: TNRC6-PABC_bdg RRM_occluded RRM_1
Other DBs
NCBI-GeneID: 134034362
NCBI-ProteinID: XP_062334880
LinkDB
Position
2:20328209..20343026
AA seq 2090 aa
MEDKKKKKEDKKKREASQKVLSASVTEQKIKVPESSKPPSTQTPATPGSVSPSPGPAPPS
SPCPAAGVAVPPAGNNAKRAAVANGQPPSSGTQPPQQQRYMPREVPPRFRCQQDQKVLLK
RGQPPLSSMLLGGGSGRGATPPLHGDAAGATDPNLASSSSSPPHSSSSSSSVAASSPTTT
TTSTYANSTWGAGSGSQPPSQGWEKVIVDGSDLEEWPSIVARARVSPEGGEGAELDGPNS
SSASWSERSVQQPKGGGGGVSGTGSGSSESPSPPRSSPLSASSSLNECVPSGAAWGAPPA
QAAGAGGVVEGGPAAATALYNSKVSPLPGSQEGPGGVSSGGGLGANFHPNANPSAWPALV
QDGTPAGVVGGATEGGSPSSSSSITPSSFSASTAQPLPSVNPSGHRQQHLLQDRPTSDAE
QHWGGGLGPEMGVGGPGPKTGGVDGIMDCGAGGGGSGNLSGSSSSSSSTSSSWRAMPPPS
SSDLNTGASKTDGWGGGGGGAQGQEGSVWGFSSHGDKAGSAGDKGWGRGNEGSSNTPAVS
QGAWDRGPEGEYGSAGVGGGSGNLATGSSGGGRGGSSSNSSSSGASGGGGGVGGGGGVSQ
DSASPTFATMTRAWDNQKPVEAVEGGVEEWGGQGGGGGVGGGSRAGSGDPNNQQEHSSHR
HRSQPGPNAEVALQSMLSRTDLDPRVLSNTGWGQTQIRQNVAWDLEARSGGGGGRSDGCS
SSSSTSSSSTMNTGRGPTYPPNTGSKTTDPSAGAHMAHTNQGLGPGPARDGWEGGGGAPQ
PGRAPLPGANSMRKPGSLGEEPEGKSAGGWGDVGPSEGPGKGWGSEDQEWAGDRRGGGGG
GVARGNWREFGEQGSGGGGGGRSGWGGNQEEKGTVGWKEMGRGEGGGWGQRGGGGGERGG
GGGERGGGGGERGGGGGGDWGQRDAKPVSGGGWSDGRGRGGSNSDDSSWGKMDEGGPQRG
WGGGGDRGGGDRGGGDRGGGDRGGGDRGGGDRGGGDRGGGDMGGKGHQDWGGGKPHTAQI
PNSQAASLKAPNQQQHQSQTQQPPPGSMQGGWGRSGGPQPQSQNQSPGWIVGPIPQIPGE
ALEPSGWEEPSPQSISRKMEIDDGTSAWGDPTRYNNKNVNLWDKNSASPGQTQPLQGQAQ
QAPPPQQQQPPPRRQQGIPPNRDANPATAPGMGPGMWGGSSNMAGQSVDNGTAAWGQSTE
PAGWGDPEDPSKAGGWRNPSPNPVKSVSKSVGEGWGKGEGSVSASRNPSWEDEDDGGGVW
NSAGQQGSNSSYNSVGWNQGHGGKRGNIKGGGGENWLNPMNRQFSNMGLLGDDPSVDKKL
DGDRRGMSDYNGEMRRGGRGGAYRMTSSKEPGDMGPYGDKVAGHGVYGGGSGGMPPPRGI
PQPGMHPINPSQGLRAQVPHQFLSPQVPGPMLKQMPSPGSGVGGVGGVGGVGAGVFPPQL
SPQQIAVLSNIYPHVQQFHLACQLLLQQQQQQQQQQQQQLLQNQRKFPQPQPLRQQADPQ
QLARIMAILQQQRQQQGGVGGGGVGSSKLSPSHLGGSQSKQPMGDSLSHTGGGGPLSDLH
AKSQGMYSGLAPGGSLSGLELGSMMGGVGGMKDGGGQQSRFKWMMEGHSPAPSPPDTAHH
KNGPLPNPIKARGGSPYSQYELLGGEGLGMPPQCPSDWQRTPGSKMSTKTGTSSWPPEFQ
PGVPWKGIPSADPESDPYMTPGSVLGSPGPPSLNDSDHQLLRDNTGPNPSLNTSLPLPGA
WPYSASDSPLGNAHSTAAKYSDYKPSWPPEPIGHNKLWKTNRNSSQLPRPPPGLTSQKQA
SPSPWGSGGPRLASSWGGGRGSQDSQSRFGPGTGLGSAWSDGTASRGSCWLLLSNLTPQI
DGSTLRTICMQHGPLLTFHLGLTQGSALIRYSTRQEAAKAQGALHMCVLGNTTILAEFVS
EEDVARYFAHSQAGGAEGAGPGVTVGSGQGSSGPGAAVASSGGSSPGSERGGGTTTGGNG
GGGGGGVLGSVGSSSSGWQSLDGTISSPEVPAAQGPGLGVFAQWSTNGAGDGGGGLGGGE
SSRAGLWGGVTPGYSGSSLWGTPQMEDRHQMGSPAALLPGDLLGGGADSI
NT seq 6273 nt   +upstreamnt  +downstreamnt
atggaagacaagaaaaagaagaaagaggataaaaagaaaagggaagcctcccagaaggta
ctgtctgcctcggtgactgaacagaaaatcaaagtgccagaatcaagcaagcccccctcc
acccagacgccagccaccccaggctcagtgtcccctagccctggccctgctcctccctcg
tccccctgcccagcagccggggtcgcggtccctccggccgggaacaatgcaaagcgggct
gctgtggccaacggacagcccccctcctctggaactcaacccccccagcagcagcgctac
atgccccgggaggtgcccccgcgatttcgctgccagcaggaccagaaagtgctactgaag
aggggccagcccccgctgtcctccatgctgctgggaggaggcagtgggaggggagccacc
cccccgctgcatggagatgcagccggagccacagatcccaacctggcttcatcctcatcg
tcaccccctcactcgtcatcatcctcatcttcagttgctgcttcttctcctactactact
actacttcaacttatgcaaattccacatggggggcgggctctggcagccagcccccttct
cagggctgggagaaggtgattgtggacgggtctgacctggaggagtggcctagcatcgtg
gccagggccagagtgagccccgagggaggggagggagcggagctggacggcccgaacagc
agcagtgcctcgtggagtgagagaagcgtccaacagccgaaaggaggaggaggaggagta
tctggaacgggatccgggagctccgagagtccctctccgcctcgctcctctcctctgtcc
gcctcgtcttcgctcaatgaatgtgtgccgtccggcgccgcgtggggcgcccccccggcc
caggcagccggggccgggggggttgttgagggtgggccggcagcagcaacagctctctac
aattccaaagtctcccctctccctggctctcaggagggccccgggggggtcagcagcggt
gggggcctcggtgccaacttccaccccaacgccaacccctccgcctggcccgccctggtg
caggatgggaccccggcgggggtcgtcggaggtgcgaccgagggagggtcgccgtcatcc
tcatcctcaatcacaccttcatctttctctgccagcaccgctcaacctctcccctctgtg
aatccatccggccaccgtcagcagcacctgctccaggacaggcctacctcggacgcggag
cagcactggggagggggactggggccggagatgggagtaggtggaccgggaccaaaaact
ggaggtgtagatggtataatggactgtggggcaggaggaggagggagtgggaatctctct
ggctcatcatcttcttcctcttcaacttcctcatcgtggagagcgatgcctccgccctcc
tcctccgacctcaacacaggtgcctctaagactgacgggtggggaggaggagggggaggt
gctcaggggcaggaggggagtgtgtggggcttcagcagccatggcgacaaggcagggtcg
gcgggagacaaagggtggggaagaggcaacgagggtagctcaaataccccagcggtatct
cagggagcttgggacagaggcccagagggggagtatgggtcggcaggtgtcggaggaggt
tccggtaacttagcaacgggaagtagcggaggaggtcgaggcgggagcagcagcaacagc
agcagcagcggagctagcggtggaggaggaggagtaggaggaggaggcggggtttcccag
gactctgcatctccgacgtttgcgactatgacaagagcttgggacaatcagaagccagtg
gaagctgtggagggaggggtagaggagtggggaggccagggaggaggaggaggggtgggg
ggaggctccagggcggggagcggtgacccgaacaatcagcaggagcactccagccaccgc
caccgctctcaaccgggccccaacgctgaagtggccttacagagcatgctcagtcgcacc
gaccttgaccccagggtgttgtccaacaccgggtgggggcagacccagatccgtcagaat
gtggcctgggacctggaagcgcgatcaggaggaggaggggggagaagtgatggatgcagt
tcatcctcgtctacttcctcgtcatccaccatgaacaccggtcgtgggccgacttacccc
ccgaacacaggttcaaagactactgatccatctgctggggcccacatggcccacacaaac
cagggtctaggccctggtccagccagggatggctgggagggtggaggcggtgctccgcag
ccaggccgtgcaccactgcctggggccaacagcatgcggaaacctggatccctcggagaa
gaaccagaaggcaagagtgctggaggctggggtgacgttgggccgtctgaggggccagga
aaaggctgggggagcgaggatcaagagtgggctggtgaccgtagaggaggtggaggtgga
ggagttgcaaggggtaactggagagagtttggagaacagggtagtggaggaggaggaggt
ggtcgaagtggctggggaggaaatcaggaggagaaagggacagtgggttggaaggagatg
ggaagaggggaaggtggaggttggggacagagaggaggaggtgggggagagagaggagga
ggtgggggagagagaggaggaggtgggggagagagaggaggaggtgggggaggagactgg
gggcagagagatgccaagccagtaagtggtggaggatggtcagatgggaggggccgaggt
ggaagcaactccgacgacagttcctggggtaaaatggatgagggaggcccacagagaggt
tggggaggtggaggagaccgagggggaggagaccgagggggaggagaccgagggggagga
gaccgagggggaggagaccgagggggaggagaccgagggggaggagaccgagggggagga
gacatgggtggaaaaggccaccaggactgggggggcgggaagccgcacacagcacagata
ccaaacagccaagcggcatcacttaaagccccaaatcaacagcagcaccaatcacagacc
caacagccaccaccagggtccatgcaggggggctggggccgctccggaggaccccaaccc
cagagccagaaccaaagcccgggctggatcgtcggccccatcccccagatccctggagaa
gccctggagcccagcggctgggaggagccctcccctcagtccatcagccgcaagatggag
attgacgacgggacgtctgcgtggggcgaccccactcgctacaacaacaagaatgtcaac
ctgtgggacaagaacagtgcctcccctggccagacgcagccactgcaaggccaggcccag
caggctccgccccctcagcagcagcagccgccgcccaggagacagcaggggatcccaccc
aacagggacgccaaccccgccaccgctcccggcatgggcccaggtatgtggggagggagc
agcaacatggcaggacaatctgtagacaacggcacggctgcctggggccagtccaccgag
cccgcgggctggggcgaccctgaggaccccagcaaggccggcggctggaggaacccctcg
cccaaccccgtcaagtctgtctccaagtcggtgggggagggctggggcaagggggagggc
tctgtgtccgcctcccggaaccccagctgggaggacgaggacgacgggggcggggtctgg
aacagcgcgggccagcagggcagtaactcctcctacaactcagtcggctggaaccaaggc
cacgggggcaagagaggcaacatcaagggtggaggaggagagaactggttgaatcctatg
aaccgccagttctccaacatgggccttctgggcgacgacccgagtgtggacaagaagctg
gacggcgatcggagggggatgagcgactacaacggagagatgcggcgaggagggagaggg
ggagcataccgtatgaccagttccaaagagcctggagacatggggccttacggtgacaag
gtggcgggtcacggtgtgtacggaggcggcagcggagggatgcccccgccacgggggata
ccccagcctggcatgcaccccatcaacccctcccaggggctccgtgcccaagtgcctcat
cagttcctgtcccctcaggtgccaggccccatgctgaagcagatgccgtctccgggcagc
ggcgtggggggggtgggaggtgtggggggcgtgggggcaggggtgttcccccctcagctg
tccccccagcagatagcagtgctcagtaacatctacccccacgttcaacagttccacctg
gcttgtcagctcctgctacagcaacaacaacagcagcagcagcagcagcagcagcagctc
ctgcagaaccagaggaagttcccccagccccagcctctccgtcagcaggcagacccccag
cagctggccaggatcatggccatcctgcagcagcagagacagcagcagggcggcgtggga
ggagggggagtcgggagctccaaactgtccccgtctcatctgggggggtctcagtccaag
cagcccatgggagactccctgtcgcacaccggcggggggggccccttgtcagaccttcat
gccaaatcacaggggatgtactccggtctggcccccgggggcagcttgtcaggcctggag
ctgggctccatgatggggggggtggggggcatgaaggacggaggggggcagcagtcccgc
ttcaagtggatgatggagggccactcccctgccccctctcctccagacacagcccatcac
aagaacggtcctctgcccaaccccatcaaagcccggggtggttccccgtactcccagtat
gagctgctggggggcgagggcctggggatgcccccccagtgcccctcagactggcagcgg
accccagggagcaagatgagcaccaagactggcacctccagttggcctccagagttccag
ccaggcgtgccctggaaggggatcccgagcgccgacccggagtctgacccctacatgacc
cccggcagtgtgctgggctcccccggaccgcccagcctcaacgactcagaccaccagtta
ctgcgagacaacacagggccgaacccttccctcaacacctcgctgcctttaccaggtgcc
tggccctacagtgcctcagacagccccctcggcaacgcacatagcacagcagcaaagtac
tccgactacaagcccagctggccccctgagcccattggacacaacaagctgtggaagacc
aatcgcaacagctcccagctgccacgcccccctccgggcctcaccagtcagaagcaggcc
tcgccctccccatggggcagtggaggcccgcgattggccagcagctggggcggaggcagg
ggcagtcaggactctcagtccagatttgggccaggtacgggcttaggctcggcgtggagt
gatggcacggcctccaggggcagctgctggctgctgcttagcaacctgacccctcagatt
gatggctctaccttgaggactatctgcatgcagcatggccccctgctgacctttcacctc
ggcctgacccagggcagcgctctgattcgctacagcaccagacaggaagcagccaaggcc
cagggtgcactgcacatgtgcgtcctgggcaacaccacaatcctggcggagtttgtgagc
gaggaggacgtggctcgctattttgcacattcccaggcgggaggggcagagggggccggc
ccgggggtcacggtagggtcgggtcaggggtcatcggggccgggcgcggccgtggccagc
agcggaggcagctccccggggagtgagcgaggcggaggaacgactacgggtggaaacgga
ggaggaggcggaggaggagttctaggtagtgtgggctcatccagctccggctggcaaagt
ctggatggtacgatcagctccccggaggtgccggcggcccaaggacctggtctgggcgtc
ttcgcccagtggagcaccaacggggctggggacgggggaggggggctggggggaggggag
tcgagcagggcagggctctggggtggggtgacgcctgggtactccggcagcagtctgtgg
ggcacaccccaaatggaggacaggcaccaaatgggcagccccgccgccctgttgcctggc
gaccttctgggtggaggggctgactccatctga

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