Osmerus eperlanus (European smelt): 134034639
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Entry
134034639 CDS
T10927
Symbol
scrib
Name
(RefSeq) protein scribble homolog isoform X1
KO
K16175
protein scribble
Organism
oep Osmerus eperlanus (European smelt)
Pathway
oep04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
oep00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
134034639 (scrib)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
LRR_8
LRR_14
LRR_4
PDZ_2
LRR_1
LRR_13
LRR_9
LRR_LRWD1
Motif
Other DBs
NCBI-GeneID:
134034639
NCBI-ProteinID:
XP_062335085
LinkDB
All DBs
Position
15:11737943..11797352
Genome browser
AA seq
1927 aa
AA seq
DB search
MLKCIPLWRCNRHVESVDKRHCSLKAVPDEIFRYSRSLEELLLDANQLKDLPKPFFRLLN
LRKLGLSDNEIQRLPPEVANFMQLVELDISRNDIPEIPESIKFCKALEIADFSGNPLSRL
PDGFTQLRALAHLALNDVSLLALPNDIGNLANLVTLELRENLLKSLPTSLSFLVKLEQLD
LGKNELEVLPDTLGALPNLRELWLDRNQLSSLPPELGNLRRLVCLDISENRLEELPSELS
GLLALTDLLLTQNLLEIVPDGIGSLKQLSILKVDQNRLTHLSDSIGECENLTELVLTENL
LQTLPRSLGKLKKLTNLNVDRNRLGSVPSELGGLASLNVLSLRDNRLTRLPAELADATEL
HVLDVAGNRLQNLPFALANLNLKAMWLAENQSQPMLKFQTEDDERTGEKVLTCYLLPQQP
SPSLENLLQNSVDDSWTDSNLNRVSVIQFQDETKGEEEDDEAAAERRGLQRRATPHPSEL
KVMKKVIEERRNEVYSARPDGELDSPGAEEKRLSGLSNQSHDSQASNSTASANSHEERRG
LIPMGEELVEVRGREEEDLDEMEVEYIEPTVHFAEEPIIRGGGGEEDGEQDGERSEDEEE
REGRRAALSSEKQRLIRKDTPHYKKHFKITKLPRPEAVAALLQGFTPEGRPPPTRAPAEE
EEEEEEEEEDEEAEEECNVTPQRHHRVEMAELENSRHLQGNSSLQPVKGVSFDQVNNLLI
EPARIEEEEHTLTILRQTGGLGISIAGGRGSTPYKGDDEGIFISRVSEDGPAARAGVKVG
DKLLEVNGVDLHGAEHHTAVEALRSSGSSVSMTVVRERMVEPENAITTTPLRPEDDYFPR
ERRSSGLPFLMDASPPAPRHRLSTCLVRNDKGLGFSIAGGKGSTAFRTGDTAIYISRIAE
GGAAHRDSTLRVGDRVLSINGVDMTEARHDQAVALLTGTSPTIALLVERDQAAPGGSPGQ
SRARAHSPPPPEPSDSPDQEDPTDERLSPHGNHLSQPLEDEYPIEEVMLVKAGGPLGLSI
VGGSDHASHPFGISEPGVFISKVIPHGLACQSGLRVGDRILEVNNIDLRHATHQEAVRAL
LSNKQEIRMLVRRDPSPPGMQEIVIQKQPGEKLGISIRGGAKGHAGNPFDPTDEGIFISK
VSSSGAAARDGRLQVGMRILEVSNHSLLGMTHTEAVRVLRAVGDTLLMLVCDGFDPGNAA
TIEASPGIIANPFAGNIVRKNSMESISSIDRDLSPEELEILQKESEMVRETSQWEREEME
KVERMRLEREEATRLLEEETESLSSGPLKLDYRTLAALPTTSLQKVNRAPSTEPQRTESP
VRDAPYSPSLQPPSSLSSSSSSLGGGRETRFASIHFTSNSTAKETSSSTRPGAIQPQSRA
RPSTSPATPDGHASPNPFQHGPSPINSQTPTPLQPRAPSPASPDEFPLNIKQAYKAFAAV
PHSHAVLEPPQDLYGLRNNVHSMQPSPEPQLYNEVFEDEVEGGVGLMSPLSPDRREYLNL
AAVPRLSRPSLELKTPSPGGRGSPEQRSFRDRQKYFEIDVKQQTPDKPKPRVSLVGEDDL
KKMKEEEARRLDHPREFLLDEEEEEEEDLAKQMADMKAHGKVLLDGVEYKVESVATPPRH
CSTPPSYNATPPSYCGSSGPSSVDGKGDSPRNSMEESFRLEQRPNSMTGLIPVYPGESGA
PIRTAKAERRQQERLRMQSPELATPSVKDLSPAEKRALEAEKRAMWRAARPYGLEEDVKQ
YEQDLAKRLYQSRVRASQGAASAPPQPPTSSSSAASSQLRMKSLEQDALKAQMVIAKSRD
GKKRGTLDQLAESPSPAPTPSPTPLEDVSPRGVTSPGRLSLSEKKFDYRQFAAIPSSKPV
YDIQSPDAVDDIQFIDDGSSNPVPTLNPEAEVPAALPTSSALEEMALYSNKRKLRQGRRS
LETAVPT
NT seq
5784 nt
NT seq
+upstream
nt +downstream
nt
atgctgaagtgtatcccgttgtggcggtgcaaccgccacgtcgaatcggtggacaagcga
cattgcagcttgaaggctgtccccgacgagatattccgctacagccgcagcctggaagag
cttctactcgacgccaatcaacttaaagacctacccaagcctttcttcagactcctgaac
ctgaggaagcttggtctgagcgacaatgagatccagaggcttcctcctgaggtggccaac
ttcatgcagctggtggagctggacatatccagaaacgacattcctgagatcccagagagc
attaagttttgcaaggcgttggagatcgcagacttcagtggaaaccccctctccaggtta
cccgacggcttcacccagctccgagcgctggctcacctggcactcaacgacgtgtcactg
ctggcactgcccaacgacatcgggaacctggccaacctggtgacgctcgagctcagggag
aacctgctcaagtccctgcccacatcgctgtctttcttggtcaaactggaacagctggac
ctggggaagaacgaactggaagtgctgccggacactcttggtgctctccctaacctgagg
gagctgtggctggatcgcaaccagctgtcctctctaccaccagagctggggaacctgcgg
aggctggtgtgtctggacatctctgagaaccggctggaggagctgccctcagagctcagt
ggtctgttggccctcactgacctgctgctcacacagaacctgctggagatagtccctgat
ggaataggcagtctgaagcagctgtctatcctgaaagtggaccagaaccgcctcacgcac
ctcagtgactccataggggagtgtgagaacctgacagagctggtgctgactgagaacctc
ttacagactctgcctcgctcgctgggcaagctgaagaagctgaccaacctgaacgtggac
cggaaccgcctgggcagcgtgcccagcgagctgggcggcctggccagcctcaacgtgctc
tccctcagggacaaccgtctgaccaggctgcccgccgagctggccgacgccacggagctg
cacgtgctggatgtggcggggaacagactccagaaccttccattcgccctggccaacctc
aacctgaaggccatgtggctagcagagaaccagtctcagcccatgctcaagttccagacc
gaggacgacgagaggacaggggagaaggtgctgacctgctacctgctgccccagcagccc
tctcctagcctggagaacctgctccagaacagcgtggacgacagctggaccgacagcaac
ctcaaccgtgtgtccgtcatccagttccaggacgagaccaagggcgaggaggaggacgac
gaggcagcggccgagcgcaggggtctacagcgcagggccacgccccaccccagtgagctg
aaggtgatgaagaaggtgatagaggagaggaggaacgaggtctactctgccaggcctgat
ggagaactggactctccaggagcagaggagaagcgactgagcggtctttccaatcagagc
cacgactcccaggcgtccaacagcacggcatcggccaactcccacgaggagaggcggggc
ctgatccccatgggggaggagcttgtggaggtccggggccgagaggaggaggacctggat
gaaatggaggtcgaatacatcgagcccacggtgcactttgcggaggagcccatcatccgc
ggcggcggcggcgaggaggacggcgagcaggacggcgagcgcagcgaggacgaggaggag
cgggaggggcggcgggcggcactctcctcggagaagcagcggctcatcaggaaggacacg
ccgcactacaagaagcacttcaagatcaccaagctgccccggcctgaggcggtggctgca
ctgctccagggcttcacccccgagggccgccccccccccacacgggcccccgcggaggag
gaagaggaggaggaggaggaagaggaagatgaagaggcggaggaagagtgtaatgtcacc
cctcagcgccaccacagggtagagatggcagagctggagaacagccgccacctacagggc
aactcctccctgcagcctgttaagggggtgtcatttgatcaagtcaataatctgctgatt
gagcctgctcgaattgaggaggaagagcacaccctgaccatcctgcgccagacagggggc
ctgggcatcagcatagccggagggaggggctccacgccctacaagggagacgacgagggg
atcttcatctccagggtgtctgaggacggacctgcagccagggccggggtcaaggtcggg
gacaaactcctggaggtgaacggcgtggacctccacggggcggagcaccacacggcggtc
gaggccctccgcagctcgggctcctccgtctccatgacggtggtgcgggagcgcatggtg
gagccggagaacgccatcaccaccacgcccctgcggcccgaggacgactacttcccccgg
gagcggcgcagcagcggcctgcccttcctcatggacgcaagccctcccgccccccgccac
cgcctctccacctgcctggtccgcaacgacaagggcctgggcttcagcatagccgggggg
aagggatccaccgccttccggacgggtgacacggctatctacatctcccgcatcgccgag
ggcggagccgcccacagagacagcacgctgcgagtgggagaccgggtcctctcgatcaac
ggtgtagacatgacagaggccagacatgaccaggcagtagcgctgcttaccggcacctcc
cccaccatcgccctcctggtggagcgggaccaggcggccccggggggctccccgggccag
tcccgtgcccgtgcacactcccctccacctccagagccctccgactcccccgaccaggag
gaccccaccgacgagcgcctctccccccacgggaaccacctgagccagccgctggaggat
gagtaccccatcgaggaagtgatgttggtgaaggcagggggccctctggggctgagcatt
gtgggaggcagcgaccacgccagtcacccgtttggcatcagtgagccgggggtgttcatc
tctaaggtgattccgcatggcctggcatgtcagagcggcctgcgtgttggagatcgtatc
ctggaggtcaacaacatcgacctgcgacacgccacccaccaggaagctgtcagagctctg
ctgtccaataagcaggagatccgcatgctggtgcgcagggacccctcgccgccagggatg
caggaaatagtcatccagaagcagccaggagagaagctgggcatcagtatccgtggaggt
gccaagggccacgctggcaacccctttgaccccactgacgagggcatcttcatctccaag
gtgagctcgagcggggcggcggcgagggacggccgtctgcaggtgggcatgcgcatcctg
gaggtgagcaaccacagcctgctggggatgacccacacggaggcggtgcgcgtgctccgc
gccgtgggagacaccctgctcatgctggtgtgtgacggcttcgaccccggcaacgccgcc
accatagaggcttcacctggaatcatcgccaacccgtttgccgggaacatcgtccgcaaa
aacagcatggagagcatctcatcgattgaccgagacctgagcccagaggagctggagatc
ctgcagaaggagtcggagatggtgagggagacgtcccagtgggagagagaggaaatggag
aaagtggagcgcatgcgtttggagcgagaggaggcaacacgtctgctagaagaggagacc
gagagcctgagctcagggcctctcaagctcgactacaggaccctggcagccctgcccacc
accagcctgcagaaggtcaacagggcgccttccactgaaccccagaggactgaaagccct
gtgagagatgccccctactcacccagcttacagccgcccagctctctctcctcctcctcc
agctccctgggtgggggcagggagacccgtttcgccagcatccatttcacttccaactcc
actgccaaggagacctcctcatcaacgagaccgggggccatccagcctcagtctcgcgcc
cggcccagcacctcccccgctacgccggacggacacgccagccccaaccccttccaacat
ggcccctcccccatcaactcccaaacccctacccccctgcagcctcgcgccccctccccc
gcctcaccagacgagttccctctgaatatcaagcaggcatacaaggcgttcgccgccgtg
cctcactcccacgctgtgctggagccgccgcaggatctctatggcctgaggaacaatgtc
cactccatgcaaccttctccagagcctcagctgtacaacgaggtgtttgaggatgaggtg
gaggggggggtggggctgatgtcccctctgtctcctgaccgccgggagtatctgaatctg
gcggcggtgccacgcctctccagaccctccctggagctgaagacgccctcccccggaggc
aggggcagccccgagcagcgctccttcagagaccggcagaagtactttgagatcgacgtg
aagcagcagaccccagacaagcccaagccccgcgtgtccctcgtgggagaggacgacctg
aagaaaatgaaggaggaggaagcgaggaggctggaccatccccgggagttcctcctggac
gaggaggaggaggaggaggaggacctggccaagcagatggctgacatgaaggcccatggc
aaggttctgctggacggggtggagtacaaggtggagagtgtggccacgccccccagacac
tgctccacccctcccagctacaatgccacgccccccagttactgcggcagctcagggccc
tcctcagttgatgggaaaggagactctccgaggaactcaatggaggagagcttcaggctg
gagcagagacccaactccatgacgggcctgatcccggtgtaccccggggagtcgggggct
cccatccggacggccaaggcagagcggcggcagcaggagcgcctgaggatgcagagccct
gagctggccacgccctccgtcaaggacctgtcccccgccgagaaacgagccctggaggcc
gagaagagggccatgtggagggcagccaggccctatggcctggaggaggatgttaaacag
tatgagcaggacctggctaagaggctgtaccagtccagggtgagggcgtctcagggcgct
gcctccgcccctccccagccccccacctcctcctcctccgctgcctcctcccagctcagg
atgaagtctctggagcaggatgcgctgaaggcccagatggtcattgccaagtcccgggat
ggcaagaagcgtggcactctggaccagttggccgagtccccctcacccgcccccaccccc
tcccccacccctctggaagatgtgagtcctcggggagtgacgtcaccaggcagactgtcc
ctgtcagaaaagaagtttgactacagacagtttgctgccattccttcttccaaacccgta
tacgacatccagtccccagacgctgtcgatgacatccagtttattgacgatggctccagc
aacccagtgcccaccctgaaccctgaggccgaggtgcccgcagctctgcctaccagctca
gccctggaggagatggcgctctacagcaacaaacgcaagctgagacaaggccgccgcagc
ctggagactgccgtgcccacataa
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